Mouse SNP Summary
|
Symbol Name ID |
Rr575994
regulatory region 575994 MGI:8038126 |
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SNPs to Text File
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
MSM/Ms
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs258621907 MGI SNP Detail Alliance Variant |
Chr3:41569740 | Jade1 Rr575994 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||||
| rs13464609 MGI SNP Detail Alliance Variant |
Chr3:41569824 | Jade1 Rr575994 |
SNP | C/T | T | T | C | C | T | T | C | C | T | T | C | T | T | T | C | T | T | T | T | |||||||||||||||||||||||||||||||||||||
| rs242304720 MGI SNP Detail Alliance Variant |
Chr3:41569827 | Jade1 Rr575994 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | |||
| rs50345302 MGI SNP Detail Alliance Variant |
Chr3:41570005 | Jade1 Rr575994 |
SNP | C/T | C | C | C | C | C | C | C | T | C | C | C | T | T | C | T | T | C | |||||||||||||||||||||||||||||||||||||||
| rs229872131 MGI SNP Detail Alliance Variant |
Chr3:41570151 | Jade1 Rr575994 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | |||
| rs47763176 MGI SNP Detail Alliance Variant |
Chr3:41570232 | Jade1 Rr575994 |
SNP | C/T | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | |||||||||||||||||||||||||||||||||||||||||
| rs49897154 MGI SNP Detail Alliance Variant |
Chr3:41570249 | Jade1 Rr575994 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | C | C | T | C | C | T | ||||||||||||||||||||||||||||||||||||||||
| rs107798095 MGI SNP Detail Alliance Variant |
Chr3:41570476 | Jade1 Rr575994 |
SNP | C/T | C | C | T | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs30301309 MGI SNP Detail Alliance Variant |
Chr3:41570558 | Jade1 Rr575994 |
SNP | A/T | T | T | ? | A | T | |||||||||||||||||||||||||||||||||||||||||||||||||||
| rs52563801 MGI SNP Detail Alliance Variant |
Chr3:41570565 | Jade1 Rr575994 |
SNP | A | A | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs230625090 MGI SNP Detail |
Chr3:41571386 | Rr575994 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |||
| rs249668556 MGI SNP Detail |
Chr3:41571424 | Rr575994 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |||
| rs51338665 MGI SNP Detail |
Chr3:41571454 | Rr575994 |
SNP | C/T | C | C | C | C | C | C | T | C | C | C | T | C | T | T | C | |||||||||||||||||||||||||||||||||||||||||
| rs243607991 MGI SNP Detail |
Chr3:41571463 | Rr575994 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||
| rs263537476 MGI SNP Detail |
Chr3:41571506 | Rr575994 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | |||
| rs224427243 MGI SNP Detail |
Chr3:41571522 | Rr575994 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | |||
| rs250939439 MGI SNP Detail |
Chr3:41571528 | Rr575994 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | |||
| rs258689544 MGI SNP Detail |
Chr3:41571545 | Rr575994 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |||
| rs223997826 MGI SNP Detail |
Chr3:41571575 | Rr575994 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||
| rs235627863 MGI SNP Detail |
Chr3:41571589 | Rr575994 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C | C | C | C | T | C | C | C | C | T | C | T | C | C | C | C | C | C | C | C | C | C | C | C | |||
| rs255916231 MGI SNP Detail |
Chr3:41571613 | Rr575994 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | |||
| rs230222950 MGI SNP Detail |
Chr3:41571620 | Rr575994 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | |||
| rs253101890 MGI SNP Detail |
Chr3:41571636 | Rr575994 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | |||
| rs216018593 MGI SNP Detail |
Chr3:41571684 | Rr575994 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | |||
| rs233713052 MGI SNP Detail |
Chr3:41571714 | Rr575994 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | |||
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
MSM/Ms
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
| rs31476764 MGI SNP Detail |
Chr3:41571840 | Rr575994 |
SNP | A/G | A | A | G | G | A | A | G | G | G | A | G | A | A | G | G | G | G | A | G | |||||||||||||||||||||||||||||||||||||
| rs216866968 MGI SNP Detail |
Chr3:41572042 | Rr575994 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | |||
| rs230835591 MGI SNP Detail |
Chr3:41572069 | Rr575994 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | |||
| rs249735579 MGI SNP Detail |
Chr3:41572100 | Rr575994 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | G | G | G | G | G | G | G | G | |||
| rs30957310 MGI SNP Detail |
Chr3:41572139 | Rr575994 |
SNP | C/T | C | C | T | T | C | C | T | T | T | C | T | C | C | T | T | T | T | C | T | |||||||||||||||||||||||||||||||||||||
| rs238585650 MGI SNP Detail |
Chr3:41572161 | Rr575994 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | |||
| rs49777405 MGI SNP Detail |
Chr3:41572162 | Rr575994 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | A | G | A | A | G | |||||||||||||||||||||||||||||||||||||||||
| rs51154934 MGI SNP Detail |
Chr3:41572181 | Rr575994 |
SNP | C/T | T | T | T | T | T | T | C | T | T | T | C | T | C | C | T | |||||||||||||||||||||||||||||||||||||||||
| rs46107604 MGI SNP Detail |
Chr3:41572226 | Rr575994 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | G | T | |||||||||||||||||||||||||||||||||||||||||||
| rs240564240 MGI SNP Detail |
Chr3:41572274 | Rr575994 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | |||
| rs252808979 MGI SNP Detail |
Chr3:41572676 | Rr575994 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |||
| rs31033493 MGI SNP Detail |
Chr3:41572693 | Rr575994 |
SNP | A/G | G | A | A | G | G | A | A | G | G | A | G | G | G | A | G | G | G | A | ||||||||||||||||||||||||||||||||||||||
| rs47653965 MGI SNP Detail |
Chr3:41572759 | Rr575994 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | A | C | A | A | C | |||||||||||||||||||||||||||||||||||||||||
| rs46862127 MGI SNP Detail |
Chr3:41572851 | Rr575994 |
SNP | A/T | A | A | A | A | A | A | T | A | A | A | T | A | T | T | A | |||||||||||||||||||||||||||||||||||||||||
| rs222199384 MGI SNP Detail |
Chr3:41572902 | Rr575994 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |||
| rs50165416 MGI SNP Detail |
Chr3:41572909 | Rr575994 |
SNP | G/T | T | T | T | T | T | T | G | T | T | T | G | T | G | G | T | |||||||||||||||||||||||||||||||||||||||||
| rs263145823 MGI SNP Detail |
Chr3:41572949 | Rr575994 Rr575995 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | T | T | T | T | C | T | T | T | T | C | T | C | T | T | T | T | T | T | T | C | T | T | T | T | |||
| rs29975646 MGI SNP Detail |
Chr3:41573322 | Rr575994 Rr575995 |
SNP | C/G | G | C | C | G | G | G | ||||||||||||||||||||||||||||||||||||||||||||||||||
| rs31028332 MGI SNP Detail |
Chr3:41573324 | Rr575994 Rr575995 |
SNP | A/C | C | A | A | C | C | C | ||||||||||||||||||||||||||||||||||||||||||||||||||
| rs256660048 MGI SNP Detail |
Chr3:41573340 | Rr575994 Rr575995 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | |||
| rs49254167 MGI SNP Detail |
Chr3:41573360 | Rr575994 |
SNP | C/G | G | G | G | C | G | G | C | G | G | G | G | G | G | |||||||||||||||||||||||||||||||||||||||||||
| rs30402725 MGI SNP Detail |
Chr3:41573416 | Rr575994 |
SNP | C/T | C | C | T | T | C | T | T | C | C | T | C | C | T | C | C | C | C | |||||||||||||||||||||||||||||||||||||||
| rs243654402 MGI SNP Detail |
Chr3:41573418 | Rr575994 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | |||
| rs51710337 MGI SNP Detail |
Chr3:41573459 | Rr575994 |
SNP | C/T | T | T | T | C | T | C | T | C | C | T | ||||||||||||||||||||||||||||||||||||||||||||||
| rs47506330 MGI SNP Detail |
Chr3:41573572 | Rr575994 |
SNP | C/T | C | C | C | C | C | C | C | T | C | T | T | C | ||||||||||||||||||||||||||||||||||||||||||||
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
MSM/Ms
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
| rs50877486 MGI SNP Detail |
Chr3:41573657 | Rr575994 |
SNP | A/G | G | G | G | G | G | G | A | G | A | A | G | |||||||||||||||||||||||||||||||||||||||||||||
| rs216213339 MGI SNP Detail |
Chr3:41573712 | Rr575994 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | G | G | G | A | G | G | G | G | A | G | A | G | G | G | G | G | G | G | A | G | G | G | G | ||||
| rs235493785 MGI SNP Detail |
Chr3:41573717 | Rr575994 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | A | C | C | C | C | A | C | C | C | C | C | A | C | C | C | C | A | C | A | C | C | C | C | C | C | C | C | C | C | C | C |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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