About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Rr576052
regulatory region 576052
MGI:8038184

<< first < prev1 next > last >>
Showing SNP(s) 1 - 33 of 33

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs585389325
MGI SNP Detail
Chr3:45330777 2610316D01Rik within coordinates of
Rr576052 1867 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs47147316
MGI SNP Detail
Chr3:45331425 2610316D01Rik within coordinates of
Cpgi13122 within coordinates of
Rr576052 1219 bp proximal
SNP A/G G G G A G G G G G G A G G G G G G G G A G A G G G A G G G G G G G A A G G A A G A G G G G G G A G A A
rs243235300
MGI SNP Detail
Chr3:45331614 2610316D01Rik within coordinates of
Cpgi13122 within coordinates of
Rr576052 1030 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A G G A A A G G A A A A G A A A A A A A A A G A A A A
rs255704965
MGI SNP Detail
Chr3:45331629 2610316D01Rik within coordinates of
Cpgi13122 within coordinates of
Rr576052 1015 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218721460
MGI SNP Detail
Chr3:45331642 2610316D01Rik within coordinates of
Cpgi13122 within coordinates of
Rr576052 1002 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs231446767
MGI SNP Detail
Chr3:45331656 2610316D01Rik within coordinates of
Cpgi13122 within coordinates of
Rr576052 988 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250559095
MGI SNP Detail
Chr3:45331678 2610316D01Rik within coordinates of
Cpgi13122 within coordinates of
Rr576052 966 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs221067198
MGI SNP Detail
Chr3:45331798 2610316D01Rik within coordinates of
Cpgi13122 within coordinates of
Rr576052 846 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246899972
MGI SNP Detail
Chr3:45332009 2610316D01Rik within coordinates of
Cpgi13122 within coordinates of
Rr576052 635 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265993646
MGI SNP Detail
Chr3:45332170 2610316D01Rik within coordinates of
Rr576052 474 bp proximal
SNP A/G G G G A G G G G G G A A G G G G G G G G A G A G G G A G G G G G G G G A A G G A A G A G G G G G G A G A A
rs227071537
MGI SNP Detail
Chr3:45332299 2610316D01Rik within coordinates of
Rr576052 345 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250932492
MGI SNP Detail
Chr3:45332387 2610316D01Rik within coordinates of
Cpgi13123 within coordinates of
Rr576052 257 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255857888
MGI SNP Detail
Chr3:45332417 2610316D01Rik within coordinates of
Cpgi13123 within coordinates of
Rr576052 227 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224773190
MGI SNP Detail
Chr3:45332619 2610316D01Rik within coordinates of
Cpgi13123 within coordinates of
Rr576052 25 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C
rs244663349
MGI SNP Detail
Chr3:45332762 Cpgi13123 within coordinates of
Rr576052 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258037835
MGI SNP Detail
Alliance Variant
Chr3:45332903 Cpgi13123 within coordinates of
Pcdh10 mRNA-UTR
Rr576052 31 bp distal
Rr576054 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227305569
MGI SNP Detail
Alliance Variant
Chr3:45332914 Cpgi13123 within coordinates of
Pcdh10 mRNA-UTR
Rr576052 42 bp distal
Rr576054 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs579958069
MGI SNP Detail
Alliance Variant
Chr3:45332982 Cpgi13123 within coordinates of
Pcdh10 mRNA-UTR
Rr576052 110 bp distal
Rr576054 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs253171420
MGI SNP Detail
Alliance Variant
Chr3:45333003 Cpgi13123 within coordinates of
Pcdh10 mRNA-UTR
Rr576052 131 bp distal
Rr576054 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217957222
MGI SNP Detail
Alliance Variant
Chr3:45333107 Pcdh10 mRNA-UTR
Rr576052 235 bp distal
Rr576054 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs36290413
MGI SNP Detail
Alliance Variant
Chr3:45333176 Pcdh10 mRNA-UTR
Rr576052 304 bp distal
Rr576054 within coordinates of
SNP A/T A A A A T A A T A
rs233778573
MGI SNP Detail
Alliance Variant
Chr3:45333211 Pcdh10 mRNA-UTR
Rr576052 339 bp distal
Rr576054 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs252383775
MGI SNP Detail
Alliance Variant
Chr3:45333387 Pcdh10 mRNA-UTR
Rr576052 515 bp distal
Rr576055 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213019381
MGI SNP Detail
Alliance Variant
Chr3:45333416 Pcdh10 mRNA-UTR
Rr576052 544 bp distal
Rr576055 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs231592234
MGI SNP Detail
Alliance Variant
Chr3:45333438 Pcdh10 mRNA-UTR
Rr576052 566 bp distal
Rr576055 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs582425059
MGI SNP Detail
Alliance Variant
Chr3:45333555 Pcdh10 mRNA-UTR
Rr576052 683 bp distal
Rr576055 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585718544
MGI SNP Detail
Alliance Variant
Chr3:45333666 Pcdh10 mRNA-UTR
Rr576052 794 bp distal
Rr576055 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250519734
MGI SNP Detail
Alliance Variant
Chr3:45333918 Cpgi13124 within coordinates of
Pcdh10 Coding-Synonymous
Rr576052 1046 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215287649
MGI SNP Detail
Alliance Variant
Chr3:45333936 Cpgi13124 within coordinates of
Pcdh10 Coding-Synonymous
Rr576052 1064 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241540247
MGI SNP Detail
Alliance Variant
Chr3:45333942 Cpgi13124 within coordinates of
Pcdh10 Coding-Synonymous
Rr576052 1070 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260586599
MGI SNP Detail
Alliance Variant
Chr3:45334089 Cpgi13124 within coordinates of
Pcdh10 Coding-Synonymous
Rr576052 1217 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T T C C C T T C C C C T C C C C C C C C T C C C C
rs227490301
MGI SNP Detail
Alliance Variant
Chr3:45334233 Cpgi13124 within coordinates of
Pcdh10 Coding-Synonymous
Rr576052 1361 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241483846
MGI SNP Detail
Alliance Variant
Chr3:45334659 Cpgi13124 within coordinates of
Pcdh10 Coding-Synonymous
Rr576052 1787 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C C T T T C C T T T T C T T T T T T T T C T T T T
<< first < prev1 next > last >>
Showing SNP(s) 1 - 33 of 33

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

Building initial tooltip...