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Mouse SNP Summary
Symbol
Name
ID 		Rr576054
regulatory region 576054
MGI:8038186

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Showing SNP(s) 1 - 33 of 33

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47147316
MGI SNP Detail		 Chr3:45331425 2610316D01Rik within coordinates of
Cpgi13122 within coordinates of
Rr576054 1448 bp proximal
 SNP A/G G G G A G G G G G G A G G G G G G G G A G A G G G A G G G G G G G A A G G A A G A G G G G G G A G A A
rs243235300
MGI SNP Detail		 Chr3:45331614 2610316D01Rik within coordinates of
Cpgi13122 within coordinates of
Rr576054 1259 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A G G A A A G G A A A A G A A A A A A A A A G A A A A
rs255704965
MGI SNP Detail		 Chr3:45331629 2610316D01Rik within coordinates of
Cpgi13122 within coordinates of
Rr576054 1244 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218721460
MGI SNP Detail		 Chr3:45331642 2610316D01Rik within coordinates of
Cpgi13122 within coordinates of
Rr576054 1231 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs231446767
MGI SNP Detail		 Chr3:45331656 2610316D01Rik within coordinates of
Cpgi13122 within coordinates of
Rr576054 1217 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250559095
MGI SNP Detail		 Chr3:45331678 2610316D01Rik within coordinates of
Cpgi13122 within coordinates of
Rr576054 1195 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs221067198
MGI SNP Detail		 Chr3:45331798 2610316D01Rik within coordinates of
Cpgi13122 within coordinates of
Rr576054 1075 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246899972
MGI SNP Detail		 Chr3:45332009 2610316D01Rik within coordinates of
Cpgi13122 within coordinates of
Rr576054 864 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265993646
MGI SNP Detail		 Chr3:45332170 2610316D01Rik within coordinates of
Rr576054 703 bp proximal
 SNP A/G G G G A G G G G G G A A G G G G G G G G A G A G G G A G G G G G G G G A A G G A A G A G G G G G G A G A A
rs227071537
MGI SNP Detail		 Chr3:45332299 2610316D01Rik within coordinates of
Rr576054 574 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250932492
MGI SNP Detail		 Chr3:45332387 2610316D01Rik within coordinates of
Cpgi13123 within coordinates of
Rr576054 486 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255857888
MGI SNP Detail		 Chr3:45332417 2610316D01Rik within coordinates of
Cpgi13123 within coordinates of
Rr576054 456 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224773190
MGI SNP Detail		 Chr3:45332619 2610316D01Rik within coordinates of
Cpgi13123 within coordinates of
Rr576054 254 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C
rs244663349
MGI SNP Detail		 Chr3:45332762 Cpgi13123 within coordinates of
Rr576052 within coordinates of
Rr576054 111 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258037835
MGI SNP Detail
Alliance Variant		 Chr3:45332903 Cpgi13123 within coordinates of
Pcdh10 mRNA-UTR
Rr576054 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227305569
MGI SNP Detail
Alliance Variant		 Chr3:45332914 Cpgi13123 within coordinates of
Pcdh10 mRNA-UTR
Rr576054 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs579958069
MGI SNP Detail
Alliance Variant		 Chr3:45332982 Cpgi13123 within coordinates of
Pcdh10 mRNA-UTR
Rr576054 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs253171420
MGI SNP Detail
Alliance Variant		 Chr3:45333003 Cpgi13123 within coordinates of
Pcdh10 mRNA-UTR
Rr576054 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217957222
MGI SNP Detail
Alliance Variant		 Chr3:45333107 Pcdh10 mRNA-UTR
Rr576054 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs36290413
MGI SNP Detail
Alliance Variant		 Chr3:45333176 Pcdh10 mRNA-UTR
Rr576054 within coordinates of
 SNP A/T A A A A T A A T A
rs233778573
MGI SNP Detail
Alliance Variant		 Chr3:45333211 Pcdh10 mRNA-UTR
Rr576054 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs252383775
MGI SNP Detail
Alliance Variant		 Chr3:45333387 Pcdh10 mRNA-UTR
Rr576054 138 bp distal
Rr576055 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213019381
MGI SNP Detail
Alliance Variant		 Chr3:45333416 Pcdh10 mRNA-UTR
Rr576054 167 bp distal
Rr576055 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs231592234
MGI SNP Detail
Alliance Variant		 Chr3:45333438 Pcdh10 mRNA-UTR
Rr576054 189 bp distal
Rr576055 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582425059
MGI SNP Detail
Alliance Variant		 Chr3:45333555 Pcdh10 mRNA-UTR
Rr576054 306 bp distal
Rr576055 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs585718544
MGI SNP Detail
Alliance Variant		 Chr3:45333666 Pcdh10 mRNA-UTR
Rr576054 417 bp distal
Rr576055 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250519734
MGI SNP Detail
Alliance Variant		 Chr3:45333918 Cpgi13124 within coordinates of
Pcdh10 Coding-Synonymous
Rr576054 669 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215287649
MGI SNP Detail
Alliance Variant		 Chr3:45333936 Cpgi13124 within coordinates of
Pcdh10 Coding-Synonymous
Rr576054 687 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241540247
MGI SNP Detail
Alliance Variant		 Chr3:45333942 Cpgi13124 within coordinates of
Pcdh10 Coding-Synonymous
Rr576054 693 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260586599
MGI SNP Detail
Alliance Variant		 Chr3:45334089 Cpgi13124 within coordinates of
Pcdh10 Coding-Synonymous
Rr576054 840 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T T C C C T T C C C C T C C C C C C C C T C C C C
rs227490301
MGI SNP Detail
Alliance Variant		 Chr3:45334233 Cpgi13124 within coordinates of
Pcdh10 Coding-Synonymous
Rr576054 984 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241483846
MGI SNP Detail
Alliance Variant		 Chr3:45334659 Cpgi13124 within coordinates of
Pcdh10 Coding-Synonymous
Rr576054 1410 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C C T T T C C T T T T C T T T T T T T T C T T T T
rs31236547
MGI SNP Detail
Alliance Variant		 Chr3:45335187 Cpgi13124 within coordinates of
Pcdh10 Coding-Synonymous
Rr576054 1938 bp distal
 SNP C/T C C T C C
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Showing SNP(s) 1 - 33 of 33
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory