Rr576075 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr576075
regulatory region 576075
MGI:8038207

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Showing SNP(s) 1 - 88 of 88

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3<tf>/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs52558217 MGI SNP Detail	Chr3:47621296	Rr576075 1939 bp proximal	SNP	G							G
rs52448575 MGI SNP Detail	Chr3:47621304	Rr576075 1931 bp proximal	SNP	A							A
rs30042204 MGI SNP Detail	Chr3:47621394	Rr576075 1841 bp proximal	SNP	A/T	T			T		T		T			A	T	A		T
rs30041283 MGI SNP Detail	Chr3:47621456	Rr576075 1779 bp proximal	SNP	C/T	T			T		T	C	C	C	C	T	T	C	C
rs30041282 MGI SNP Detail	Chr3:47621577	Rr576075 1658 bp proximal	SNP	A/G	A		G	A		A		G	G	G	G	A	G	G
rs30041281 MGI SNP Detail	Chr3:47621675	Rr576075 1560 bp proximal	SNP	C/G	G		C		G					C	C	G		C
rs108790095 MGI SNP Detail	Chr3:47621694	Rr576075 1541 bp proximal	SNP	C/T			C							C				T
rs30041280 MGI SNP Detail	Chr3:47621734	Rr576075 1501 bp proximal	SNP	C/T	T		C	T		C	C	C		C	T	T	C	C
rs30041279 MGI SNP Detail	Chr3:47621764	Rr576075 1471 bp proximal	SNP	A/C	A		C	A		A	C	C		C	A	A	C	C
rs30041278 MGI SNP Detail	Chr3:47621768	Rr576075 1467 bp proximal	SNP	C/T	T			T		T					C	T
rs3162663 MGI SNP Detail	Chr3:47621940	Rr576075 1295 bp proximal	SNP	C			C				C			C				C
rs30041276 MGI SNP Detail	Chr3:47622125	Rr576075 1110 bp proximal	SNP	A/G	G		G	G		G		G	G		G	G	A		G
rs48923921 MGI SNP Detail	Chr3:47622205	Rr576075 1030 bp proximal	SNP	T			T				T
rs3162664 MGI SNP Detail	Chr3:47622206	Rr576075 1029 bp proximal	SNP	G			G				G
rs3158757 MGI SNP Detail	Chr3:47622238	Rr576075 997 bp proximal	SNP	A/T	A		T	A		A	T	T	T	T	A	A	T	T	T
rs3162665 MGI SNP Detail	Chr3:47622313	Rr576075 922 bp proximal	SNP	G/T	T		G	T		T	G	G		G	T	T	G	G
rs30041275 MGI SNP Detail	Chr3:47622314	Rr576075 921 bp proximal	SNP	A/T	A			A		T					A	A	A
rs49595362 MGI SNP Detail	Chr3:47622337	Rr576075 898 bp proximal	SNP	T			T				T			T				T
rs47061187 MGI SNP Detail	Chr3:47622364	Rr576075 871 bp proximal	SNP	G			G				G			G				G
rs30041274 MGI SNP Detail	Chr3:47622376	Rr576075 859 bp proximal	SNP	A/T	A		T	A		A	T			T	T	A		A	A
rs30040303 MGI SNP Detail	Chr3:47622430	Rr576075 805 bp proximal	SNP	A/G	A		G	A		A	G	G	G	G	A	A	G	G
rs46932290 MGI SNP Detail	Chr3:47622444	Rr576075 791 bp proximal	SNP	A			A				A			A				A
rs30040302 MGI SNP Detail	Chr3:47622480	Rr576075 755 bp proximal	SNP	A/T	A		T	A		A	T	T		T	T	A	T	T	A
rs49159200 MGI SNP Detail	Chr3:47622531	Rr576075 704 bp proximal	SNP	A			A				A			A				A
rs46759136 MGI SNP Detail	Chr3:47622536	Rr576075 699 bp proximal	SNP	C			C				C			C				C
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3<tf>/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs45849052 MGI SNP Detail	Chr3:47622559	Rr576075 676 bp proximal	SNP	A/G			A				A			A				G
rs47645478 MGI SNP Detail	Chr3:47622588	Rr576075 647 bp proximal	SNP	A			A				A			A				A
rs30040301 MGI SNP Detail	Chr3:47622617	Rr576075 618 bp proximal	SNP	A/G	A		G	A		A		G		G	A	A	G	G	A
rs51472652 MGI SNP Detail	Chr3:47622649	Rr576075 586 bp proximal	SNP	A			A				A			A				A
rs45965254 MGI SNP Detail	Chr3:47622702	Rr576075 533 bp proximal	SNP	C			C				C			C				C
rs30040300 MGI SNP Detail	Chr3:47622737	Rr576075 498 bp proximal	SNP	G/T	T		G	T			G	G		G		T	G	G
rs211958272 MGI SNP Detail	Chr3:47622813	Rr576075 422 bp proximal	SNP	T										T				T
rs30040299 MGI SNP Detail	Chr3:47622899	Rr576075 336 bp proximal	SNP	C/T	C					T		C			C	C	C
rs47133223 MGI SNP Detail	Chr3:47622926	Rr576075 309 bp proximal	SNP	C/T			T				T			T				C
rs49537610 MGI SNP Detail	Chr3:47622930	Rr576075 305 bp proximal	SNP	C			C				C			C				C
rs30040298 MGI SNP Detail	Chr3:47622937	Rr576075 298 bp proximal	SNP	A/G	G		A	G		A	A			A		G		A
rs30040297 MGI SNP Detail	Chr3:47622986	Rr576075 249 bp proximal	SNP	A/G	A			A		A		A	A		G	A	A		A
rs30040296 MGI SNP Detail	Chr3:47622997	Rr576075 238 bp proximal	SNP	A/T	A		T	A		A	T	T	T	T	A	A	T	T
rs46878586 MGI SNP Detail	Chr3:47623050	Rr576075 185 bp proximal	SNP	A			A				A			A				A
rs30040295 MGI SNP Detail	Chr3:47623062	Rr576075 173 bp proximal	SNP	A/C	C		A	C		C	A	A		A	C	C	A	A
rs3158758 MGI SNP Detail	Chr3:47623082	Rr576075 153 bp proximal	SNP	C			C				C			C				C
rs3158759 MGI SNP Detail	Chr3:47623144	Rr576075 91 bp proximal	SNP	A/T	A		T	A		A	T	T		T	A	A	T	T
rs3162666 MGI SNP Detail	Chr3:47623216	Rr576075 19 bp proximal	SNP	G			G
rs30040294 MGI SNP Detail	Chr3:47623223	Rr576075 12 bp proximal	SNP	A/C	C			C		C					A	C			C
rs3158760 MGI SNP Detail	Chr3:47623269	Rr576075 within coordinates of	SNP	A/T	T		A	T		T	A	A	A	A	T	T	A	A	T
rs3158761 MGI SNP Detail	Chr3:47623325	Rr576075 within coordinates of	SNP	C/T	T		C	T		T		C	C	C	T	T	C	C
rs30038963 MGI SNP Detail	Chr3:47623370	Rr576075 within coordinates of	SNP	A/G	G		G	G		G		G	G		A	G	G		G
rs30038962 MGI SNP Detail	Chr3:47623766	Rr576075 73 bp distal	SNP	A/G	A		G	A		G		G		G	G	A	G	G	G
rs3162667 MGI SNP Detail	Chr3:47623794	Rr576075 101 bp distal	SNP	A/G	A			A		A		G	G	G	G	A	G	A	A
rs3158762 MGI SNP Detail	Chr3:47623843	Rr576075 150 bp distal	SNP	G/T	G		T	G		G		T	G	T	G	G	T	T	G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3<tf>/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30038960 MGI SNP Detail	Chr3:47623858	Rr576075 165 bp distal	SNP	A/G	A		A	A		A		A	A		G	A	A		A
rs3158763 MGI SNP Detail	Chr3:47624054	Rr576075 361 bp distal	SNP	C/T	T			T		C		C		C	C	T	C	C
rs30038959 MGI SNP Detail	Chr3:47624105	Rr576075 412 bp distal	SNP	G/T	G			G		T		G			G	G	G
rs3162668 MGI SNP Detail	Chr3:47624183	Rr576075 490 bp distal	SNP	A/G	G	G	A	G		G	A	A	A	A	G	G	A	A
rs30038958 MGI SNP Detail	Chr3:47624191	Rr576075 498 bp distal	SNP	A/C	A		A	A		A		A	A		C	A	A
rs3158764 MGI SNP Detail	Chr3:47624222	Rr576075 529 bp distal	SNP	G/T	G	G	T	G		G	T	T	T	T	G	G	T	T
rs30038957 MGI SNP Detail	Chr3:47624236	Rr576075 543 bp distal	SNP	C/T	T		T	T		T		T	T		C	T	T		T
rs30038956 MGI SNP Detail	Chr3:47624262	Rr576075 569 bp distal	SNP	C/T	C		C	C		C		C	C		T	C	C
rs30038955 MGI SNP Detail	Chr3:47624274	Rr576075 581 bp distal	SNP	A/C	A		A	A		A		A	A		C	A	A
rs30038954 MGI SNP Detail	Chr3:47624311	Rr576075 618 bp distal	SNP	C/T	T	T	C	T		T	C	C	C	C	T	T	C	C
rs47298121 MGI SNP Detail	Chr3:47624324	Rr576075 631 bp distal	SNP	A/G		G	A				A			A				A
rs46272733 MGI SNP Detail	Chr3:47624395	Rr576075 702 bp distal	SNP	A/G		A	G				G			G				G
rs30037873 MGI SNP Detail	Chr3:47624414	Rr576075 721 bp distal	SNP	A/G	G	G	A	G			A	A	A	A	G	G	A	A
rs30037872 MGI SNP Detail	Chr3:47624471	Rr576075 778 bp distal	SNP	C/T	T	T	C	T		T	C	C	T	C	T	T	T	C
rs3158765 MGI SNP Detail	Chr3:47624559	Rr576075 866 bp distal	SNP	A/G		A	G				G			G				G
rs30037871 MGI SNP Detail	Chr3:47624620	Rr576075 927 bp distal	SNP	A/G	G		G	G				G	G		A	G	G
rs30037870 MGI SNP Detail	Chr3:47624621	Rr576075 928 bp distal	SNP	G/T	T			T		G		T	T		T	T	T
rs30037869 MGI SNP Detail	Chr3:47624695	Rr576075 1002 bp distal	SNP	G/T	T		T	T		T		T	G		T	T	T		T
rs30037868 MGI SNP Detail	Chr3:47624704	Rr576075 1011 bp distal	SNP	C/T	T		T	T		T		T	T		C	T	T		T
rs3158766 MGI SNP Detail	Chr3:47624830	Rr576075 1137 bp distal	SNP	C/T	C		T	C		C	T	T		T	T	C	T	T	C
rs30037867 MGI SNP Detail	Chr3:47624843	Rr576075 1150 bp distal	SNP	C/T	C		C	C		C		C	C		T	C	C		C
rs30037866 MGI SNP Detail	Chr3:47624888	Rr576075 1195 bp distal	SNP	A/G	G		G	G		G		G	G		G	G	A
rs3162669 MGI SNP Detail	Chr3:47624950	Rr576075 1257 bp distal	SNP	C/G	G		C	G		G	C	C		C	C	G	C	C	G
rs3162670 MGI SNP Detail	Chr3:47624998	Rr576075 1305 bp distal	SNP	G/T	G		T	G		G	T	T	G	T	G	G	G	T
rs30037865 MGI SNP Detail	Chr3:47625021	Rr576075 1328 bp distal	SNP	A/T	T			T		A		T	T		T	T	T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3<tf>/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs3162671 MGI SNP Detail	Chr3:47625027	Rr576075 1334 bp distal	SNP	A/G	G		A	G			A	A	G	A	G	G	G	A
rs3162672 MGI SNP Detail	Chr3:47625199	Rr576075 1506 bp distal	SNP	C/T	T			T		T	C	C		C	T	T	C	C	T
rs47275845 MGI SNP Detail	Chr3:47625302	Rr576075 1609 bp distal	SNP	A			A				A			A				A
rs47167404 MGI SNP Detail	Chr3:47625323	Rr576075 1630 bp distal	SNP	C			C				C			C				C
rs30037864 MGI SNP Detail	Chr3:47625378	Rr576075 1685 bp distal	SNP	C/T	C		T	C		C	T	T		T	T	C	T	T
rs30037063 MGI SNP Detail	Chr3:47625430	Rr576075 1737 bp distal	SNP	C/G	G		G	G		C		G	G		G	G	G		C
rs30037062 MGI SNP Detail	Chr3:47625450	Rr576075 1757 bp distal	SNP	C/T	C			C		C		C			T	C	C		C
rs30037061 MGI SNP Detail	Chr3:47625472	Rr576075 1779 bp distal	SNP	C/T	C		T	C		T	T	T		T		C		T	T
rs30037060 MGI SNP Detail	Chr3:47625482	Rr576075 1789 bp distal	SNP	C/T	T		C	T		T	C	C		C	C	T		C
rs46533543 MGI SNP Detail	Chr3:47625532	Rr576075 1839 bp distal	SNP	G			G				G			G				G
rs30037059 MGI SNP Detail	Chr3:47625565	Rr576075 1872 bp distal	SNP	C/T	C		T	C		C	T	T		T	C	C	T	T
rs30037058 MGI SNP Detail	Chr3:47625588	Rr576075 1895 bp distal	SNP	A/T	A		T	A		A	T	T	T	T	A	A	T	T
rs30037057 MGI SNP Detail	Chr3:47625606	Rr576075 1913 bp distal	SNP	C/T	C		T	C		C	T	T	C	T	C	C	C	T	C

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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