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Mouse SNP Summary
Symbol
Name
ID
Rr576312
regulatory region 576312
MGI:8038444

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245113441
MGI SNP Detail
Alliance Variant
Chr3:51314438 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1988 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs255604887
MGI SNP Detail
Alliance Variant
Chr3:51314522 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1904 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C A C C C C
rs227357887
MGI SNP Detail
Alliance Variant
Chr3:51314590 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1836 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247698115
MGI SNP Detail
Alliance Variant
Chr3:51314609 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1817 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs260168006
MGI SNP Detail
Alliance Variant
Chr3:51314616 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1810 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A
rs227657791
MGI SNP Detail
Alliance Variant
Chr3:51314629 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1797 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240046185
MGI SNP Detail
Alliance Variant
Chr3:51314631 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1795 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257911675
MGI SNP Detail
Alliance Variant
Chr3:51314645 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1781 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229352738
MGI SNP Detail
Alliance Variant
Chr3:51314646 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1780 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs253553947
MGI SNP Detail
Alliance Variant
Chr3:51314684 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1742 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs211771730
MGI SNP Detail
Alliance Variant
Chr3:51314714 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1712 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30090921
MGI SNP Detail
Alliance Variant
Chr3:51314747 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1679 bp proximal
SNP A/C C C C C C C A C C C C C C C C
rs246512521
MGI SNP Detail
Alliance Variant
Chr3:51314765 Ndufc1 mRNA-UTR
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1661 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs215765449
MGI SNP Detail
Alliance Variant
Chr3:51314826 Ndufc1 Coding-NonSynonymous
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1600 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232748568
MGI SNP Detail
Alliance Variant
Chr3:51314874 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1552 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs250411120
MGI SNP Detail
Alliance Variant
Chr3:51314918 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1508 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580521272
MGI SNP Detail
Alliance Variant
Chr3:51314929 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1497 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs214164677
MGI SNP Detail
Alliance Variant
Chr3:51314933 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1493 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs585269315
MGI SNP Detail
Alliance Variant
Chr3:51314947 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1479 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs235460368
MGI SNP Detail
Alliance Variant
Chr3:51315083 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1343 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260938373
MGI SNP Detail
Alliance Variant
Chr3:51315244 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1182 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579249794
MGI SNP Detail
Alliance Variant
Chr3:51315285 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1141 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226815596
MGI SNP Detail
Alliance Variant
Chr3:51315295 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1131 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs242137646
MGI SNP Detail
Alliance Variant
Chr3:51315330 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1096 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs253777664
MGI SNP Detail
Alliance Variant
Chr3:51315337 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1089 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30090920
MGI SNP Detail
Alliance Variant
Chr3:51315375 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 1051 bp proximal
SNP A/G G G G G G G A G G G G G G G G
rs239982836
MGI SNP Detail
Alliance Variant
Chr3:51315482 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 944 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs257849268
MGI SNP Detail
Alliance Variant
Chr3:51315493 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 933 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs221522885
MGI SNP Detail
Alliance Variant
Chr3:51315516 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 910 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241684168
MGI SNP Detail
Alliance Variant
Chr3:51315526 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 900 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T C T C T T T T T T T T T T T T
rs264467258
MGI SNP Detail
Alliance Variant
Chr3:51315556 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 870 bp proximal
SNP A/C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C A C C C C C C C G C C C C
rs233566911
MGI SNP Detail
Alliance Variant
Chr3:51315557 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr576312 869 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G C G G G G
rs30090919
MGI SNP Detail
Alliance Variant
Chr3:51315602 Ndufc1 Coding-Synonymous
Ndufc1 Noncoding-Transcript-Variant
Rr576312 824 bp proximal
SNP C/T T T T T T T C T T T C T C C T
rs257851842
MGI SNP Detail
Alliance Variant
Chr3:51315681 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr374943 within coordinates of
Rr576312 745 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226669414
MGI SNP Detail
Alliance Variant
Chr3:51315809 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr374943 within coordinates of
Rr576312 617 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs244442985
MGI SNP Detail
Alliance Variant
Chr3:51315828 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr374943 within coordinates of
Rr576312 598 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs213649320
MGI SNP Detail
Alliance Variant
Chr3:51315836 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr374943 within coordinates of
Rr576312 590 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs237208990
MGI SNP Detail
Alliance Variant
Chr3:51315872 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr374943 within coordinates of
Rr576312 554 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C T C T C C C C C C C C C C C C
rs249134016
MGI SNP Detail
Alliance Variant
Chr3:51315944 Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr374943 within coordinates of
Rr576312 482 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219138188
MGI SNP Detail
Alliance Variant
Chr3:51316058 Cpgi13138 within coordinates of
Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr374943 within coordinates of
Rr576312 368 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs235596095
MGI SNP Detail
Alliance Variant
Chr3:51316080 Cpgi13138 within coordinates of
Ndufc1 Intron
Ndufc1 Noncoding-Transcript-Variant
Rr374943 within coordinates of
Rr576312 346 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30090918
MGI SNP Detail
Alliance Variant
Chr3:51316144 Cpgi13138 within coordinates of
Ndufc1 Intron
Rr374943 within coordinates of
Rr576312 282 bp proximal
SNP C/T T T T T T T C T T T C T C C T
rs30090917
MGI SNP Detail
Alliance Variant
Chr3:51316161 Cpgi13138 within coordinates of
Ndufc1 Intron
Rr374943 within coordinates of
Rr576312 265 bp proximal
SNP A/G G G G G G G G G G G A G G G G
rs221148267
MGI SNP Detail
Alliance Variant
Chr3:51316220 Cpgi13138 within coordinates of
Ndufc1 Intron
Rr374943 within coordinates of
Rr576312 206 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30090916
MGI SNP Detail
Alliance Variant
Chr3:51316232 Cpgi13138 within coordinates of
Ndufc1 Intron
Rr374943 within coordinates of
Rr576312 194 bp proximal
SNP C/G G G G G G G G G G G C G G G G
rs233105806
MGI SNP Detail
Alliance Variant
Chr3:51316334 Cpgi13138 within coordinates of
Ndufc1 Coding-Synonymous
Rr374943 within coordinates of
Rr576312 92 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30090915
MGI SNP Detail
Alliance Variant
Chr3:51316357 Cpgi13138 within coordinates of
Ndufc1 mRNA-UTR
Rr374943 within coordinates of
Rr576310 within coordinates of
Rr576312 69 bp proximal
Tssr33211 within coordinates of
SNP C/T T T T T T T C T T T C T T T T
rs222006711
MGI SNP Detail
Alliance Variant
Chr3:51316399 Cpgi13138 within coordinates of
Ndufc1 mRNA-UTR
Rr374943 within coordinates of
Rr576311 within coordinates of
Rr576312 27 bp proximal
Tssr33211 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs244441503
MGI SNP Detail
Alliance Variant
Chr3:51316440 Cpgi13138 within coordinates of
Ndufc1 mRNA-UTR
Rr374943 within coordinates of
Rr576311 within coordinates of
Rr576312 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578895508
MGI SNP Detail
Alliance Variant
Chr3:51316494 Cpgi13138 within coordinates of
Ndufc1 mRNA-UTR
Rr374943 within coordinates of
Rr576311 within coordinates of
Rr576312 47 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264606503
MGI SNP Detail
Alliance Variant
Chr3:51316539 Ndufc1 mRNA-UTR
Rr374943 within coordinates of
Rr576311 within coordinates of
Rr576312 92 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs222331038
MGI SNP Detail
Alliance Variant
Chr3:51316563 Ndufc1 Intron
Rr374943 within coordinates of
Rr576311 within coordinates of
Rr576312 116 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240504762
MGI SNP Detail
Alliance Variant
Chr3:51316705 Ndufc1 Intron
Rr374943 within coordinates of
Rr576311 within coordinates of
Rr576312 258 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs30090914
MGI SNP Detail
Alliance Variant
Chr3:51316735 Ndufc1 Intron
Rr374943 within coordinates of
Rr576311 within coordinates of
Rr576312 288 bp distal
SNP A/G A A A A A A G A A A A A A A A
rs226609231
MGI SNP Detail
Alliance Variant
Chr3:51316745 Ndufc1 Intron
Rr374943 within coordinates of
Rr576311 within coordinates of
Rr576312 298 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs244389086
MGI SNP Detail
Alliance Variant
Chr3:51316873 Ndufc1 Intron
Rr374943 within coordinates of
Rr576311 within coordinates of
Rr576312 426 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs582239620
MGI SNP Detail
Alliance Variant
Chr3:51316913 Ndufc1 Intron
Rr374943 within coordinates of
Rr576312 466 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs265030328
MGI SNP Detail
Alliance Variant
Chr3:51316932 Ndufc1 Intron
Rr374943 within coordinates of
Rr576312 485 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G T G G G G G G G G G G G G
rs228622183
MGI SNP Detail
Alliance Variant
Chr3:51316965 Ndufc1 Intron
Rr374943 within coordinates of
Rr576312 518 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252462737
MGI SNP Detail
Alliance Variant
Chr3:51316970 Ndufc1 Intron
Rr374943 within coordinates of
Rr576312 523 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219145459
MGI SNP Detail
Alliance Variant
Chr3:51316980 Ndufc1 Intron
Rr374943 within coordinates of
Rr576312 533 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C A C A C C C C C C C A C C C C
rs235542502
MGI SNP Detail
Alliance Variant
Chr3:51316989 Ndufc1 Intron
Rr374943 within coordinates of
Rr576312 542 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs247288717
MGI SNP Detail
Alliance Variant
Chr3:51317053 Ndufc1 Intron
Rr374943 within coordinates of
Rr576312 606 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs215276252
MGI SNP Detail
Alliance Variant
Chr3:51317080 Ndufc1 Intron
Rr374943 within coordinates of
Rr576312 633 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A G A G A A A A A A A G A A A A
rs234948539
MGI SNP Detail
Alliance Variant
Chr3:51317167 Ndufc1 Intron
Rr374943 within coordinates of
Rr576312 720 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264396591
MGI SNP Detail
Alliance Variant
Chr3:51317235 Ndufc1 Intron
Rr576312 788 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs222263987
MGI SNP Detail
Alliance Variant
Chr3:51317242 Ndufc1 Intron
Rr576312 795 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A T A A A A A A T A A A A A A A T A A A A
rs212795843
MGI SNP Detail
Alliance Variant
Chr3:51317243 Ndufc1 Intron
Rr576312 796 bp distal
SNP A/T T A
rs585297950
MGI SNP Detail
Alliance Variant
Chr3:51317257 Ndufc1 Intron
Rr576312 810 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs251629547
MGI SNP Detail
Alliance Variant
Chr3:51317263 Ndufc1 Intron
Rr576312 816 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs220474958
MGI SNP Detail
Alliance Variant
Chr3:51317291 Ndufc1 Intron
Rr576312 844 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246562385
MGI SNP Detail
Alliance Variant
Chr3:51317343 Ndufc1 Intron
Rr576312 896 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262258592
MGI SNP Detail
Alliance Variant
Chr3:51317397 Ndufc1 Intron
Rr576312 950 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs229013025
MGI SNP Detail
Alliance Variant
Chr3:51317496 Ndufc1 Intron
Rr576312 1049 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs240994585
MGI SNP Detail
Alliance Variant
Chr3:51317552 Ndufc1 Intron
Rr576312 1105 bp distal
SNP A/G/T A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs266111864
MGI SNP Detail
Alliance Variant
Chr3:51317614 Ndufc1 Intron
Rr576312 1167 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228514806
MGI SNP Detail
Alliance Variant
Chr3:51317626 Ndufc1 Intron
Rr576312 1179 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247235754
MGI SNP Detail
Alliance Variant
Chr3:51317628 Ndufc1 Intron
Rr576312 1181 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T C T C T T T T T T T C T T T T
rs215215923
MGI SNP Detail
Alliance Variant
Chr3:51317667 Ndufc1 Intron
Rr576312 1220 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs226634808
MGI SNP Detail
Alliance Variant
Chr3:51317668 Ndufc1 Intron
Rr576312 1221 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs255409966
MGI SNP Detail
Alliance Variant
Chr3:51317669 Ndufc1 Intron
Rr576312 1222 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs212998386
MGI SNP Detail
Alliance Variant
Chr3:51317679 Ndufc1 Intron
Rr576312 1232 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs236516939
MGI SNP Detail
Alliance Variant
Chr3:51317712 Ndufc1 Intron
Rr576312 1265 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261084291
MGI SNP Detail
Alliance Variant
Chr3:51317729 Ndufc1 Intron
Rr576312 1282 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs216939514
MGI SNP Detail
Alliance Variant
Chr3:51317755 Ndufc1 Intron
Rr576312 1308 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233877412
MGI SNP Detail
Alliance Variant
Chr3:51317790 Ndufc1 Intron
Rr576312 1343 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T A T A A T T T T A T A T A T A
rs251577568
MGI SNP Detail
Alliance Variant
Chr3:51317799 Ndufc1 Intron
Rr576312 1352 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs220418839
MGI SNP Detail
Alliance Variant
Chr3:51317826 Ndufc1 Intron
Rr576312 1379 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs243733157
MGI SNP Detail
Alliance Variant
Chr3:51317829 Ndufc1 Intron
Rr576312 1382 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs261847018
MGI SNP Detail
Alliance Variant
Chr3:51317894 Ndufc1 Intron
Rr576312 1447 bp distal
SNP A/C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G C G C G G G G G G G A G G G G
rs221173617
MGI SNP Detail
Alliance Variant
Chr3:51317945 Ndufc1 Intron
Rr576312 1498 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243760483
MGI SNP Detail
Alliance Variant
Chr3:51317971 Ndufc1 Intron
Rr576312 1524 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261143971
MGI SNP Detail
Alliance Variant
Chr3:51318004 Ndufc1 Intron
Rr576312 1557 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228481273
MGI SNP Detail
Alliance Variant
Chr3:51318057 Ndufc1 Intron
Rr576312 1610 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241202028
MGI SNP Detail
Alliance Variant
Chr3:51318074 Ndufc1 Intron
Rr576312 1627 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259064960
MGI SNP Detail
Alliance Variant
Chr3:51318102 Ndufc1 Intron
Rr576312 1655 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231191029
MGI SNP Detail
Alliance Variant
Chr3:51318147 Ndufc1 Intron
Rr576312 1700 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs250770674
MGI SNP Detail
Alliance Variant
Chr3:51318231 Ndufc1 Intron
Rr576312 1784 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C T T C C C C C C C C C C C C
rs213388895
MGI SNP Detail
Alliance Variant
Chr3:51318251 Ndufc1 Intron
Rr576312 1804 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227840361
MGI SNP Detail
Alliance Variant
Chr3:51318278 Ndufc1 Intron
Rr576312 1831 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A T A T A A A A A A A T A A A A
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Showing SNP(s) 1 - 100 of 103

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory