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Mouse SNP Summary
Symbol
Name
ID 		Rr576616
regulatory region 576616
MGI:8038748

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30317364
MGI SNP Detail
Alliance Variant		 Chr3:52890867 Cog6 Intron
Gm65168 within coordinates of
Rr576616 1985 bp proximal
 SNP C/G G C G G G G G C C G G G G G C C C
rs30317367
MGI SNP Detail
Alliance Variant		 Chr3:52890905 Cog6 Intron
Gm65168 within coordinates of
Rr576616 1947 bp proximal
 SNP C/T T C T T T C C T T T T T C C C
rs263640612
MGI SNP Detail
Alliance Variant		 Chr3:52890913 Cog6 Intron
Gm65168 within coordinates of
Rr576616 1939 bp proximal
 SNP C/G C G
rs30317370
MGI SNP Detail
Alliance Variant		 Chr3:52890932 Cog6 Intron
Gm65168 within coordinates of
Rr576616 1920 bp proximal
 SNP A/G A G A A A A A G G A A A A A G G G
rs218146251
MGI SNP Detail
Alliance Variant		 Chr3:52891001 Cog6 Intron
Gm65168 within coordinates of
Rr576616 1851 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs239077109
MGI SNP Detail
Alliance Variant		 Chr3:52891032 Cog6 Intron
Gm65168 within coordinates of
Rr576616 1820 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs263092628
MGI SNP Detail
Alliance Variant		 Chr3:52891037 Cog6 Intron
Gm65168 within coordinates of
Rr576616 1815 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs223804664
MGI SNP Detail
Alliance Variant		 Chr3:52891047 Cog6 Intron
Gm65168 within coordinates of
Rr576616 1805 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs231691834
MGI SNP Detail
Alliance Variant		 Chr3:52891052 Cog6 Intron
Gm65168 within coordinates of
Rr576616 1800 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs30317373
MGI SNP Detail
Alliance Variant		 Chr3:52891082 Cog6 Intron
Gm65168 within coordinates of
Rr576616 1770 bp proximal
 SNP C/T T T T T T T T C T T T T
rs249148343
MGI SNP Detail
Alliance Variant		 Chr3:52891096 Cog6 Intron
Gm65168 within coordinates of
Rr576616 1756 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30318346
MGI SNP Detail
Alliance Variant		 Chr3:52891335 Cog6 Intron
Gm65168 within coordinates of
Rr576615 within coordinates of
Rr576616 1517 bp proximal
 SNP A/C A A A A A A A A A A A A A C A
rs30318349
MGI SNP Detail
Alliance Variant		 Chr3:52891365 Cog6 Intron
Gm65168 within coordinates of
Rr576615 within coordinates of
Rr576616 1487 bp proximal
 SNP A/G G G G G G G G G G G G G G G A
rs264266021
MGI SNP Detail
Alliance Variant		 Chr3:52891417 Cog6 Intron
Gm65168 within coordinates of
Rr576615 within coordinates of
Rr576616 1435 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30318352
MGI SNP Detail
Alliance Variant		 Chr3:52891471 Cog6 Intron
Gm65168 within coordinates of
Rr576615 within coordinates of
Rr576616 1381 bp proximal
 SNP C/T C C T C C C T C T T C C C C C T T
rs30215920
MGI SNP Detail
Alliance Variant		 Chr3:52891475 Cog6 Intron
Gm65168 within coordinates of
Rr576615 within coordinates of
Rr576616 1377 bp proximal
 SNP G/T G G T T G T
rs30319095
MGI SNP Detail
Alliance Variant		 Chr3:52891522 Cog6 Intron
Gm65168 within coordinates of
Rr576615 within coordinates of
Rr576616 1330 bp proximal
 SNP A/G G G A G G G G A G A A G G G G G G A A
rs237728526
MGI SNP Detail
Alliance Variant		 Chr3:52891631 Cog6 Intron
Gm65168 within coordinates of
Rr576615 within coordinates of
Rr576616 1221 bp proximal
 SNP C/T C T
rs30319098
MGI SNP Detail
Alliance Variant		 Chr3:52891635 Cog6 Intron
Gm65168 within coordinates of
Rr576615 within coordinates of
Rr576616 1217 bp proximal
 SNP C/G C C G C C C C G G G G C C G C C G G G
rs244881458
MGI SNP Detail
Alliance Variant		 Chr3:52891652 Cog6 Intron
Gm65168 within coordinates of
Rr576615 within coordinates of
Rr576616 1200 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256660227
MGI SNP Detail
Alliance Variant		 Chr3:52891679 Cog6 Intron
Gm65168 within coordinates of
Rr576615 within coordinates of
Rr576616 1173 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs30319101
MGI SNP Detail
Alliance Variant		 Chr3:52891687 Cog6 Intron
Gm65168 within coordinates of
Rr576615 within coordinates of
Rr576616 1165 bp proximal
 SNP G/T G G T G G G G T G G G G T T
rs248965396
MGI SNP Detail
Alliance Variant		 Chr3:52891695 Cog6 Intron
Gm65168 within coordinates of
Rr576615 within coordinates of
Rr576616 1157 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218184946
MGI SNP Detail
Alliance Variant		 Chr3:52891707 Cog6 Intron
Gm65168 within coordinates of
Rr576615 within coordinates of
Rr576616 1145 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A C A A A A A A C A A A A A A A A A A A A
rs233224431
MGI SNP Detail
Alliance Variant		 Chr3:52891724 Cog6 Intron
Gm65168 within coordinates of
Rr576615 within coordinates of
Rr576616 1128 bp proximal
 SNP G/T G T G T G G G G G G G G T G G G G G G T T G G T T G G T G G G T T G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30319854
MGI SNP Detail
Alliance Variant		 Chr3:52891744 Cog6 Intron
Gm65168 within coordinates of
Rr576616 1108 bp proximal
 SNP C/G C C C C C C C C C C C C C G C
rs30319857
MGI SNP Detail
Alliance Variant		 Chr3:52891793 Cog6 Intron
Gm65168 within coordinates of
Rr576616 1059 bp proximal
 SNP A/G G G A G G G G A A A G G A G G A A A
rs215656240
MGI SNP Detail
Alliance Variant		 Chr3:52891826 Cog6 Intron
Gm65168 within coordinates of
Rr576616 1026 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T
rs30319860
MGI SNP Detail
Alliance Variant		 Chr3:52891909 Cog6 Intron
Gm65168 within coordinates of
Rr576616 943 bp proximal
 SNP C/G G G C G G G G G C C G G G G G G C C
rs586448153
MGI SNP Detail
Alliance Variant		 Chr3:52891995 Cog6 Intron
Gm65168 within coordinates of
Rr576616 857 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs580361378
MGI SNP Detail
Alliance Variant		 Chr3:52892013 Cog6 Intron
Gm65168 within coordinates of
Rr576616 839 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs249226955
MGI SNP Detail
Alliance Variant		 Chr3:52892054 Cog6 Intron
Gm65168 within coordinates of
Rr576616 798 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs212349982
MGI SNP Detail
Alliance Variant		 Chr3:52892055 Cog6 Intron
Gm65168 within coordinates of
Rr576616 797 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs233804557
MGI SNP Detail
Alliance Variant		 Chr3:52892061 Cog6 Intron
Gm65168 within coordinates of
Rr576616 791 bp proximal
 SNP C/T C T
rs583814346
MGI SNP Detail
Alliance Variant		 Chr3:52892070 Cog6 Intron
Gm65168 within coordinates of
Rr576616 782 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs587360102
MGI SNP Detail
Alliance Variant		 Chr3:52892074 Cog6 Intron
Gm65168 within coordinates of
Rr576616 778 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580069796
MGI SNP Detail
Alliance Variant		 Chr3:52892075 Cog6 Intron
Gm65168 within coordinates of
Rr576616 777 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G
rs30319863
MGI SNP Detail
Alliance Variant		 Chr3:52892096 Cog6 Intron
Gm65168 within coordinates of
Rr576616 756 bp proximal
 SNP C/T T T C T T C C T T T T T C
rs46946276
MGI SNP Detail
Alliance Variant		 Chr3:52892101 Cog6 Intron
Gm65168 within coordinates of
Rr576616 751 bp proximal
 SNP A/G G A G G
rs30320686
MGI SNP Detail
Alliance Variant		 Chr3:52892130 Cog6 Intron
Gm65168 within coordinates of
Rr576616 722 bp proximal
 SNP C/T C T C C T T C C C C C T T
rs47846070
MGI SNP Detail
Alliance Variant		 Chr3:52892131 Cog6 Intron
Gm65168 within coordinates of
Rr576616 721 bp proximal
 SNP A/G A G A G
rs30320689
MGI SNP Detail
Alliance Variant		 Chr3:52892223 Cog6 Intron
Cog6 mRNA-UTR
Gm65168 within coordinates of
Rr576616 629 bp proximal
 SNP C/T T T C T T T T T C C T T T T T T C C
rs220301311
MGI SNP Detail
Alliance Variant		 Chr3:52892299 Cog6 Intron
Cog6 mRNA-UTR
Gm65168 within coordinates of
Rr576616 553 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238827441
MGI SNP Detail
Alliance Variant		 Chr3:52892317 Cog6 Intron
Cog6 mRNA-UTR
Gm65168 within coordinates of
Rr576616 535 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs30320692
MGI SNP Detail
Alliance Variant		 Chr3:52892322 Cog6 Intron
Cog6 mRNA-UTR
Gm65168 within coordinates of
Rr576616 530 bp proximal
 SNP A/G G A G G G G A A A G G G G A A
rs30321535
MGI SNP Detail
Alliance Variant		 Chr3:52892333 Cog6 Coding-Synonymous
Cog6 Intron
Gm65168 within coordinates of
Rr576616 519 bp proximal
 SNP A/T A T A A A A A T T A A A A A A T T
rs218701121
MGI SNP Detail
Alliance Variant		 Chr3:52892419 Cog6 Intron
Gm65168 within coordinates of
Rr576616 433 bp proximal
 SNP C/G G C
rs240670161
MGI SNP Detail
Alliance Variant		 Chr3:52892437 Cog6 Intron
Gm65168 within coordinates of
Rr576616 415 bp proximal
 SNP A/T T A
rs232511852
MGI SNP Detail
Alliance Variant		 Chr3:52892518 Cog6 Intron
Gm65168 within coordinates of
Rr576616 334 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257346915
MGI SNP Detail
Alliance Variant		 Chr3:52892619 Cog6 Intron
Gm65168 within coordinates of
Rr576616 233 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T A T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214840512
MGI SNP Detail
Alliance Variant		 Chr3:52892625 Cog6 Intron
Gm65168 within coordinates of
Rr576616 227 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs30321538
MGI SNP Detail
Alliance Variant		 Chr3:52892665 Cog6 Intron
Gm65168 within coordinates of
Rr576616 187 bp proximal
 SNP A/G G G G G G G G G G G A G G G G
rs30321541
MGI SNP Detail
Alliance Variant		 Chr3:52892682 Cog6 Intron
Gm65168 within coordinates of
Rr576616 170 bp proximal
 SNP A/C A C A A A A C C C A A C A A C C C
rs30322224
MGI SNP Detail
Alliance Variant		 Chr3:52892769 Cog6 Intron
Gm65168 within coordinates of
Rr576616 83 bp proximal
 SNP A/G G G G G G G G G G G G G G A G
rs30322227
MGI SNP Detail
Alliance Variant		 Chr3:52892785 Cog6 Intron
Gm65168 within coordinates of
Rr576616 67 bp proximal
 SNP A/G A A A A A A G A A A G A A A A
rs212386871
MGI SNP Detail
Alliance Variant		 Chr3:52892996 Cog6 Intron
Gm65168 within coordinates of
Rr397670 within coordinates of
Rr576616 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235446995
MGI SNP Detail
Alliance Variant		 Chr3:52893051 Cog6 Intron
Gm65168 within coordinates of
Rr397670 within coordinates of
Rr576616 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31096992
MGI SNP Detail
Alliance Variant		 Chr3:52893064 Cog6 Intron
Gm65168 within coordinates of
Rr397670 within coordinates of
Rr576616 within coordinates of
 SNP C/T T C
rs583525133
MGI SNP Detail
Alliance Variant		 Chr3:52893066 Cog6 Intron
Gm65168 within coordinates of
Rr397670 within coordinates of
Rr576616 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T A T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T
rs30501180
MGI SNP Detail
Alliance Variant		 Chr3:52893071 Cog6 Intron
Gm65168 within coordinates of
Rr397670 within coordinates of
Rr576616 within coordinates of
 SNP A/C C A
rs52347013
MGI SNP Detail
Alliance Variant		 Chr3:52893078 Cog6 Intron
Gm65168 within coordinates of
Rr397670 within coordinates of
Rr576616 within coordinates of
 SNP A A
rs586997601
MGI SNP Detail
Alliance Variant		 Chr3:52893114 Cog6 Intron
Gm65168 within coordinates of
Rr397670 within coordinates of
Rr576616 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580839282
MGI SNP Detail
Alliance Variant		 Chr3:52893117 Cog6 Intron
Gm65168 within coordinates of
Rr397670 within coordinates of
Rr576616 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584035880
MGI SNP Detail
Alliance Variant		 Chr3:52893124 Cog6 Intron
Gm65168 within coordinates of
Rr397670 within coordinates of
Rr576616 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs52390263
MGI SNP Detail
Alliance Variant		 Chr3:52893154 Cog6 Intron
Gm65168 within coordinates of
Rr397670 within coordinates of
Rr576616 within coordinates of
 SNP T T
rs52574186
MGI SNP Detail
Alliance Variant		 Chr3:52893161 Cog6 Intron
Gm65168 within coordinates of
Rr397670 within coordinates of
Rr576616 within coordinates of
 SNP C C
rs586497330
MGI SNP Detail
Alliance Variant		 Chr3:52893171 Cog6 Intron
Gm65168 within coordinates of
Rr397670 within coordinates of
Rr576616 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs52562808
MGI SNP Detail
Alliance Variant		 Chr3:52893181 Cog6 Intron
Gm65168 within coordinates of
Rr397670 within coordinates of
Rr576616 within coordinates of
 SNP C C
rs262740378
MGI SNP Detail
Alliance Variant		 Chr3:52893211 Cog6 Intron
Gm65168 within coordinates of
Rr397670 within coordinates of
Rr576616 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C
rs219961343
MGI SNP Detail
Alliance Variant		 Chr3:52893221 Cog6 Intron
Gm65168 within coordinates of
Rr397670 within coordinates of
Rr576616 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A
rs30322230
MGI SNP Detail
Alliance Variant		 Chr3:52893228 Cog6 Intron
Gm65168 within coordinates of
Rr397670 within coordinates of
Rr576616 within coordinates of
 SNP A/G G A G G G A A A G G A G G A A A
rs231646223
MGI SNP Detail
Alliance Variant		 Chr3:52893240 Cog6 Intron
Gm65168 within coordinates of
Rr397670 within coordinates of
Rr576616 within coordinates of
 SNP C/T C T
rs250782933
MGI SNP Detail
Alliance Variant		 Chr3:52893332 Cog6 Intron
Gm65168 within coordinates of
Rr576616 within coordinates of
 SNP C/T T C
rs30322233
MGI SNP Detail
Alliance Variant		 Chr3:52893333 Cog6 Intron
Gm65168 within coordinates of
Rr576616 within coordinates of
 SNP A/G G A G G G G A A G G G G G G A A
rs237407435
MGI SNP Detail
Alliance Variant		 Chr3:52893358 Cog6 Intron
Gm65168 within coordinates of
Rr576616 8 bp distal
 SNP C/T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30323226
MGI SNP Detail
Alliance Variant		 Chr3:52893514 Cog6 Intron
Gm65168 within coordinates of
Rr576616 164 bp distal
 SNP A/G A A A A A A G A A A G A A G A
rs30323229
MGI SNP Detail
Alliance Variant		 Chr3:52893574 Cog6 Intron
Gm65168 within coordinates of
Rr576616 224 bp distal
 SNP A/G G A G G G G A A G G G G G A A
rs30323232
MGI SNP Detail
Alliance Variant		 Chr3:52893630 Cog6 Intron
Gm65168 within coordinates of
Rr576616 280 bp distal
 SNP A/G G A G G G G A A G G G G G A A
rs245473015
MGI SNP Detail
Alliance Variant		 Chr3:52893683 Cog6 Intron
Gm65168 within coordinates of
Rr576616 333 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs256436470
MGI SNP Detail
Alliance Variant		 Chr3:52893691 Cog6 Intron
Gm65168 within coordinates of
Rr576616 341 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G
rs225349077
MGI SNP Detail
Alliance Variant		 Chr3:52893703 Cog6 Intron
Gm65168 within coordinates of
Rr576616 353 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs243117421
MGI SNP Detail
Alliance Variant		 Chr3:52893741 Cog6 Intron
Gm65168 within coordinates of
Rr576616 391 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254254563
MGI SNP Detail
Alliance Variant		 Chr3:52893771 Cog6 Intron
Gm65168 within coordinates of
Rr576616 421 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs229524715
MGI SNP Detail
Alliance Variant		 Chr3:52893787 Cog6 Intron
Gm65168 within coordinates of
Rr576616 437 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259503864
MGI SNP Detail
Alliance Variant		 Chr3:52893801 Cog6 Intron
Gm65168 within coordinates of
Rr576616 451 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs30324065
MGI SNP Detail
Alliance Variant		 Chr3:52893918 Cog6 Intron
Gm65168 within coordinates of
Rr576616 568 bp distal
 SNP C/T C C C C C C C C C C C C C C T
rs30324068
MGI SNP Detail
Alliance Variant		 Chr3:52893940 Cog6 Intron
Gm65168 within coordinates of
Rr576616 590 bp distal
 SNP A/G A G A A A A G G G A A G A A G G G
rs30179567
MGI SNP Detail
Alliance Variant		 Chr3:52894050 Cog6 Intron
Gm65168 within coordinates of
Rr576616 700 bp distal
 SNP C/T T T C T T T T C C C T T C T T C C C
rs214157301
MGI SNP Detail
Alliance Variant		 Chr3:52894057 Cog6 Intron
Gm65168 within coordinates of
Rr576616 707 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs231292889
MGI SNP Detail
Alliance Variant		 Chr3:52894090 Cog6 Intron
Gm65168 within coordinates of
Rr576616 740 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs585113603
MGI SNP Detail
Alliance Variant		 Chr3:52894223 Cog6 Intron
Gm65168 within coordinates of
Rr576616 873 bp distal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579038325
MGI SNP Detail
Alliance Variant		 Chr3:52894224 Cog6 Intron
Gm65168 within coordinates of
Rr576616 874 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs582512931
MGI SNP Detail
Alliance Variant		 Chr3:52894236 Cog6 Intron
Gm65168 within coordinates of
Rr576616 886 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs250065348
MGI SNP Detail
Alliance Variant		 Chr3:52894288 Cog6 Intron
Gm65168 within coordinates of
Rr576616 938 bp distal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs218140186
MGI SNP Detail
Alliance Variant		 Chr3:52894291 Cog6 Intron
Gm65168 within coordinates of
Rr576616 941 bp distal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs219582325
MGI SNP Detail
Alliance Variant		 Chr3:52894306 Cog6 Intron
Gm65168 within coordinates of
Rr576616 956 bp distal
 SNP A/T T A
rs239583612
MGI SNP Detail
Alliance Variant		 Chr3:52894308 Cog6 Intron
Gm65168 within coordinates of
Rr576616 958 bp distal
 SNP A/G A G
rs248043292
MGI SNP Detail
Alliance Variant		 Chr3:52894343 Cog6 Intron
Gm65168 within coordinates of
Rr576616 993 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs256542314
MGI SNP Detail
Alliance Variant		 Chr3:52894353 Cog6 Intron
Gm65168 within coordinates of
Rr576616 1003 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs219489984
MGI SNP Detail
Alliance Variant		 Chr3:52894418 Cog6 Intron
Gm65168 within coordinates of
Rr576616 1068 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A A A A
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Showing SNP(s) 1 - 100 of 117
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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