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Mouse SNP Summary
Symbol
Name
ID
Rr576631
regulatory region 576631
MGI:8038763

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Showing SNP(s) 1 - 56 of 56

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235099893
MGI SNP Detail
Chr3:52947889 Gm42901 within coordinates of
Rr576631 1987 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31712438
MGI SNP Detail
Chr3:52947986 Gm42901 within coordinates of
Rr576631 1890 bp proximal
SNP C/T C C T C C
rs30514528
MGI SNP Detail
Chr3:52947989 Gm42901 within coordinates of
Rr576631 1887 bp proximal
SNP C/T C C T C C
rs30311911
MGI SNP Detail
Chr3:52947995 Gm42901 within coordinates of
Rr576631 1881 bp proximal
SNP A/C C C A C C
rs262859501
MGI SNP Detail
Chr3:52948117 Gm42901 within coordinates of
Rr576626 within coordinates of
Rr576631 1759 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs219667268
MGI SNP Detail
Chr3:52948186 Gm42901 within coordinates of
Rr576626 within coordinates of
Rr576631 1690 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238122026
MGI SNP Detail
Chr3:52948189 Gm42901 within coordinates of
Rr576626 within coordinates of
Rr576631 1687 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs256402351
MGI SNP Detail
Chr3:52948372 Gm42901 within coordinates of
Rr576626 within coordinates of
Rr576631 1504 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229581634
MGI SNP Detail
Chr3:52948541 Cpgi13160 within coordinates of
Gm42901 within coordinates of
Rr576626 within coordinates of
Rr576631 1335 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254251712
MGI SNP Detail
Chr3:52948577 Cpgi13160 within coordinates of
Gm42901 within coordinates of
Rr576626 within coordinates of
Rr576631 1299 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265788609
MGI SNP Detail
Chr3:52948601 Cpgi13160 within coordinates of
Gm42901 within coordinates of
Rr576626 within coordinates of
Rr576631 1275 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231859282
MGI SNP Detail
Chr3:52948604 Cpgi13160 within coordinates of
Gm42901 within coordinates of
Rr576626 within coordinates of
Rr576631 1272 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257031255
MGI SNP Detail
Chr3:52948652 Cpgi13160 within coordinates of
Gm42901 within coordinates of
Rr576626 within coordinates of
Rr576631 1224 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs6162150
MGI SNP Detail
Chr3:52948804 Cpgi13160 within coordinates of
Gm42901 within coordinates of
Rr576626 within coordinates of
Rr576631 1072 bp proximal
SNP A/G G A
rs231163779
MGI SNP Detail
Chr3:52948872 Cpgi13160 within coordinates of
Gm42901 within coordinates of
Rr576627 within coordinates of
Rr576631 1004 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242743857
MGI SNP Detail
Chr3:52948897 Cpgi13160 within coordinates of
Gm42901 within coordinates of
Rr576627 within coordinates of
Rr576631 979 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs211706393
MGI SNP Detail
Alliance Variant
Chr3:52948977 Cpgi13160 within coordinates of
Gm42901 within coordinates of
Lhfpl6 mRNA-UTR
Rr576627 within coordinates of
Rr576631 899 bp proximal
Tssr29102 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A
rs235179313
MGI SNP Detail
Alliance Variant
Chr3:52949029 Cpgi13160 within coordinates of
Gm42901 within coordinates of
Lhfpl6 mRNA-UTR
Lhfpl6 Noncoding-Transcript-Variant
Rr576628 within coordinates of
Rr576631 847 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581054145
MGI SNP Detail
Alliance Variant
Chr3:52949212 Cpgi13160 within coordinates of
Gm42901 within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576628 within coordinates of
Rr576631 664 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260191996
MGI SNP Detail
Alliance Variant
Chr3:52949347 Cpgi13160 within coordinates of
Gm42901 within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576628 within coordinates of
Rr576631 529 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs225099838
MGI SNP Detail
Alliance Variant
Chr3:52949433 Cpgi13160 within coordinates of
Gm42901 within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576628 within coordinates of
Rr576631 443 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237740315
MGI SNP Detail
Alliance Variant
Chr3:52949487 Cpgi13160 within coordinates of
Gm42901 within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576628 within coordinates of
Rr576631 389 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs262567577
MGI SNP Detail
Alliance Variant
Chr3:52949554 Gm42901 within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576628 within coordinates of
Rr576631 322 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs219697724
MGI SNP Detail
Alliance Variant
Chr3:52949563 Gm42901 within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576629 within coordinates of
Rr576631 313 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs30322604
MGI SNP Detail
Alliance Variant
Chr3:52949642 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576629 within coordinates of
Rr576631 234 bp proximal
SNP A/G G G G G G G G G G G G A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249702207
MGI SNP Detail
Alliance Variant
Chr3:52949673 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576629 within coordinates of
Rr576631 203 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs223493970
MGI SNP Detail
Alliance Variant
Chr3:52949797 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576629 within coordinates of
Rr576631 79 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs250652736
MGI SNP Detail
Alliance Variant
Chr3:52949857 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576629 within coordinates of
Rr576631 19 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263818468
MGI SNP Detail
Alliance Variant
Chr3:52949918 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 21 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs584236198
MGI SNP Detail
Alliance Variant
Chr3:52949942 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 45 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232502721
MGI SNP Detail
Alliance Variant
Chr3:52949966 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 69 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs253111369
MGI SNP Detail
Alliance Variant
Chr3:52950022 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 125 bp distal
SNP C/T T C
rs256073159
MGI SNP Detail
Alliance Variant
Chr3:52950078 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 181 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs225070023
MGI SNP Detail
Alliance Variant
Chr3:52950087 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 190 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242815173
MGI SNP Detail
Alliance Variant
Chr3:52950101 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 204 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs211746132
MGI SNP Detail
Alliance Variant
Chr3:52950330 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 433 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs45733759
MGI SNP Detail
Alliance Variant
Chr3:52950352 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 455 bp distal
SNP C/T C C T
rs233553955
MGI SNP Detail
Alliance Variant
Chr3:52950369 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 472 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49190311
MGI SNP Detail
Alliance Variant
Chr3:52950433 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 536 bp distal
SNP A/G G G A
rs30322606
MGI SNP Detail
Alliance Variant
Chr3:52950443 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 546 bp distal
SNP A/G G G G G G G G G G G G A A
rs49580258
MGI SNP Detail
Alliance Variant
Chr3:52950582 Lhfpl6 mRNA-UTR
Lhfpl6 Noncoding-Transcript-Variant
Lhfpl6 Splice-Site
Rr576631 685 bp distal
SNP A/G G A
rs30322608
MGI SNP Detail
Alliance Variant
Chr3:52950589 Lhfpl6 Intron
Lhfpl6 mRNA-UTR
Lhfpl6 Noncoding-Transcript-Variant
Lhfpl6 Splice-Site
Rr576631 692 bp distal
SNP G/T T T T T T T T T T T T T G T T T G G
rs213502448
MGI SNP Detail
Alliance Variant
Chr3:52950596 Lhfpl6 Intron
Lhfpl6 mRNA-UTR
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 699 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230870546
MGI SNP Detail
Alliance Variant
Chr3:52950597 Lhfpl6 Intron
Lhfpl6 mRNA-UTR
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 700 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs30322610
MGI SNP Detail
Alliance Variant
Chr3:52950790 Lhfpl6 Coding-Synonymous
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 893 bp distal
SNP C/T C C C C C C C T C C
rs223561499
MGI SNP Detail
Alliance Variant
Chr3:52950817 Lhfpl6 Coding-Synonymous
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 920 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs30322612
MGI SNP Detail
Alliance Variant
Chr3:52950886 Lhfpl6 Coding-Synonymous
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 989 bp distal
SNP C/T T T T T T T T T T C C T T C
rs263586843
MGI SNP Detail
Alliance Variant
Chr3:52950931 Lhfpl6 Coding-Synonymous
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 1034 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30323905
MGI SNP Detail
Alliance Variant
Chr3:52951013 Lhfpl6 Coding-Synonymous
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 1116 bp distal
SNP C/T T T T T T T C T
rs247276338
MGI SNP Detail
Alliance Variant
Chr3:52951087 Lhfpl6 Coding-Synonymous
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 1190 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30323908
MGI SNP Detail
Alliance Variant
Chr3:52951168 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 1271 bp distal
SNP A/C A A A A A A A C
rs30323911
MGI SNP Detail
Alliance Variant
Chr3:52951220 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 1323 bp distal
SNP A/G A A A A A A A A G G A
rs30324954
MGI SNP Detail
Alliance Variant
Chr3:52951343 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 1446 bp distal
SNP A/G G G G G G G G G A G G
rs253692802
MGI SNP Detail
Alliance Variant
Chr3:52951559 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 1662 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs234634242
MGI SNP Detail
Alliance Variant
Chr3:52951677 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 1780 bp distal
Rr576632 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs253603670
MGI SNP Detail
Alliance Variant
Chr3:52951838 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576631 1941 bp distal
Rr576632 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
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Showing SNP(s) 1 - 56 of 56

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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory