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Mouse SNP Summary
Symbol
Name
ID
Rr576644
regulatory region 576644
MGI:8038776

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254364506
MGI SNP Detail
Alliance Variant
Chr3:53007758 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576643 within coordinates of
Rr576644 1973 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs218108958
MGI SNP Detail
Alliance Variant
Chr3:53007765 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576643 within coordinates of
Rr576644 1966 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs234745544
MGI SNP Detail
Alliance Variant
Chr3:53007995 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1736 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs252759577
MGI SNP Detail
Alliance Variant
Chr3:53007996 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1735 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C G G
rs214284998
MGI SNP Detail
Alliance Variant
Chr3:53008015 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1716 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A
rs231524726
MGI SNP Detail
Alliance Variant
Chr3:53008016 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1715 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T C C
rs261669938
MGI SNP Detail
Alliance Variant
Chr3:53008018 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1713 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220622173
MGI SNP Detail
Alliance Variant
Chr3:53008063 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1668 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30330101
MGI SNP Detail
Alliance Variant
Chr3:53008064 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1667 bp proximal
SNP A/G G G G G G G G G A
rs260327857
MGI SNP Detail
Alliance Variant
Chr3:53008074 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1657 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221713799
MGI SNP Detail
Alliance Variant
Chr3:53008101 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1630 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs239609427
MGI SNP Detail
Alliance Variant
Chr3:53008146 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1585 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs256684973
MGI SNP Detail
Alliance Variant
Chr3:53008154 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1577 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs225619856
MGI SNP Detail
Alliance Variant
Chr3:53008230 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1501 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs242461325
MGI SNP Detail
Alliance Variant
Chr3:53008240 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1491 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T C C
rs264811460
MGI SNP Detail
Alliance Variant
Chr3:53008276 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1455 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C C
rs227385972
MGI SNP Detail
Alliance Variant
Chr3:53008326 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1405 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242160205
MGI SNP Detail
Alliance Variant
Chr3:53008368 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1363 bp proximal
SNP A/G G A
rs216395540
MGI SNP Detail
Alliance Variant
Chr3:53008392 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1339 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227780245
MGI SNP Detail
Alliance Variant
Chr3:53008411 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1320 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246468726
MGI SNP Detail
Alliance Variant
Chr3:53008416 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1315 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs212786792
MGI SNP Detail
Alliance Variant
Chr3:53008417 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1314 bp proximal
SNP A/G A G
rs578308965
MGI SNP Detail
Alliance Variant
Chr3:53008437 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1294 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs30330934
MGI SNP Detail
Alliance Variant
Chr3:53008469 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1262 bp proximal
SNP C/T C C C T T C
rs249744730
MGI SNP Detail
Alliance Variant
Chr3:53008532 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1199 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212524200
MGI SNP Detail
Alliance Variant
Chr3:53008577 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1154 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240485415
MGI SNP Detail
Alliance Variant
Chr3:53008611 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1120 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs263827943
MGI SNP Detail
Alliance Variant
Chr3:53008619 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1112 bp proximal
SNP A/C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221488000
MGI SNP Detail
Alliance Variant
Chr3:53008632 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1099 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232893714
MGI SNP Detail
Alliance Variant
Chr3:53008649 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1082 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs30330937
MGI SNP Detail
Alliance Variant
Chr3:53008682 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1049 bp proximal
SNP A/G A A A G
rs219677470
MGI SNP Detail
Alliance Variant
Chr3:53008805 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 926 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245380622
MGI SNP Detail
Alliance Variant
Chr3:53008817 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 914 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30330940
MGI SNP Detail
Alliance Variant
Chr3:53008842 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 889 bp proximal
SNP A/G A A A G
rs219866312
MGI SNP Detail
Alliance Variant
Chr3:53008884 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 847 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30330943
MGI SNP Detail
Alliance Variant
Chr3:53008971 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 760 bp proximal
SNP C/G C C C G G G
rs260427575
MGI SNP Detail
Alliance Variant
Chr3:53009061 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 670 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227839195
MGI SNP Detail
Alliance Variant
Chr3:53009076 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 655 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs246149417
MGI SNP Detail
Alliance Variant
Chr3:53009121 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 610 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs258335374
MGI SNP Detail
Alliance Variant
Chr3:53009141 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 590 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229901646
MGI SNP Detail
Alliance Variant
Chr3:53009160 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 571 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs254083196
MGI SNP Detail
Alliance Variant
Chr3:53009161 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 570 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs211943461
MGI SNP Detail
Alliance Variant
Chr3:53009196 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 535 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A G G
rs582909819
MGI SNP Detail
Alliance Variant
Chr3:53009211 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 520 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs585181339
MGI SNP Detail
Alliance Variant
Chr3:53009215 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 516 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242849388
MGI SNP Detail
Alliance Variant
Chr3:53009261 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 470 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T C C
rs246875758
MGI SNP Detail
Alliance Variant
Chr3:53009397 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 334 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216055570
MGI SNP Detail
Alliance Variant
Chr3:53009430 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 301 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G A A
rs232951178
MGI SNP Detail
Alliance Variant
Chr3:53009431 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 300 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs250530113
MGI SNP Detail
Alliance Variant
Chr3:53009448 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 283 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219731144
MGI SNP Detail
Alliance Variant
Chr3:53009475 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 256 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs235777504
MGI SNP Detail
Alliance Variant
Chr3:53009476 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 255 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A
rs261158696
MGI SNP Detail
Alliance Variant
Chr3:53009600 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 131 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234206725
MGI SNP Detail
Alliance Variant
Chr3:53009624 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 107 bp proximal
SNP C/T T C
rs227059595
MGI SNP Detail
Alliance Variant
Chr3:53009633 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 98 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs250459792
MGI SNP Detail
Alliance Variant
Chr3:53009650 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 81 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs260474817
MGI SNP Detail
Alliance Variant
Chr3:53009672 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 59 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs221563069
MGI SNP Detail
Alliance Variant
Chr3:53009677 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 54 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs240246271
MGI SNP Detail
Alliance Variant
Chr3:53009678 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 53 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258018607
MGI SNP Detail
Alliance Variant
Chr3:53009764 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs229749851
MGI SNP Detail
Alliance Variant
Chr3:53009996 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T C C
rs30331766
MGI SNP Detail
Alliance Variant
Chr3:53010032 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 within coordinates of
SNP C/T C C C T T C
rs264637618
MGI SNP Detail
Alliance Variant
Chr3:53010229 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233756370
MGI SNP Detail
Alliance Variant
Chr3:53010255 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A G G
rs246570724
MGI SNP Detail
Alliance Variant
Chr3:53010287 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 24 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T C C
rs216116170
MGI SNP Detail
Alliance Variant
Chr3:53010344 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 81 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T
rs226984537
MGI SNP Detail
Alliance Variant
Chr3:53010357 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 94 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244657397
MGI SNP Detail
Alliance Variant
Chr3:53010414 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 151 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G G
rs30323166
MGI SNP Detail
Alliance Variant
Chr3:53010415 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 152 bp distal
SNP A/G G G G A G A G
rs237325387
MGI SNP Detail
Alliance Variant
Chr3:53010427 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 164 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30323169
MGI SNP Detail
Alliance Variant
Chr3:53010441 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 178 bp distal
SNP A/G G G G G G G G G G A
rs219556558
MGI SNP Detail
Alliance Variant
Chr3:53010486 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 223 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A G G
rs235859091
MGI SNP Detail
Alliance Variant
Chr3:53010506 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 243 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T
rs253859358
MGI SNP Detail
Alliance Variant
Chr3:53010533 C130075A20Rik within coordinates of
Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 270 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221625462
MGI SNP Detail
Alliance Variant
Chr3:53010681 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 418 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240309202
MGI SNP Detail
Alliance Variant
Chr3:53010697 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 434 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251733570
MGI SNP Detail
Alliance Variant
Chr3:53010743 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 480 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A
rs30323172
MGI SNP Detail
Alliance Variant
Chr3:53010829 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 566 bp distal
SNP A/G G G A A G
rs244589831
MGI SNP Detail
Alliance Variant
Chr3:53010919 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 656 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261509782
MGI SNP Detail
Alliance Variant
Chr3:53010925 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 662 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs234932286
MGI SNP Detail
Alliance Variant
Chr3:53010966 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 703 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs240759190
MGI SNP Detail
Alliance Variant
Chr3:53010974 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 711 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T
rs257952183
MGI SNP Detail
Alliance Variant
Chr3:53010985 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 722 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A
rs226683033
MGI SNP Detail
Alliance Variant
Chr3:53010987 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 724 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A
rs244735222
MGI SNP Detail
Alliance Variant
Chr3:53010991 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 728 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C T T
rs214368823
MGI SNP Detail
Alliance Variant
Chr3:53011019 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 756 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T
rs228913883
MGI SNP Detail
Alliance Variant
Chr3:53011066 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 803 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs30324135
MGI SNP Detail
Alliance Variant
Chr3:53011136 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 873 bp distal
SNP A/G A A A G
rs30324138
MGI SNP Detail
Alliance Variant
Chr3:53011235 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 972 bp distal
SNP A/G G G G G G G G A
rs235935512
MGI SNP Detail
Alliance Variant
Chr3:53011283 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1020 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253911279
MGI SNP Detail
Alliance Variant
Chr3:53011320 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1057 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs215449546
MGI SNP Detail
Alliance Variant
Chr3:53011334 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1071 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A T T
rs253000438
MGI SNP Detail
Alliance Variant
Chr3:53011371 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1108 bp distal
SNP C/T C T
rs233165765
MGI SNP Detail
Alliance Variant
Chr3:53011372 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1109 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs257659460
MGI SNP Detail
Alliance Variant
Chr3:53011382 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1119 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30324141
MGI SNP Detail
Alliance Variant
Chr3:53011405 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1142 bp distal
SNP A/G A G G A
rs241842947
MGI SNP Detail
Alliance Variant
Chr3:53011406 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1143 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs260618607
MGI SNP Detail
Alliance Variant
Chr3:53011413 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1150 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222704479
MGI SNP Detail
Alliance Variant
Chr3:53011426 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1163 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240819784
MGI SNP Detail
Alliance Variant
Chr3:53011442 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576644 1179 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 100 of 127

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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