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Mouse SNP Summary
Symbol
Name
ID
Rr576651
regulatory region 576651
MGI:8038783

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Showing SNP(s) 1 - 100 of 129

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580662217
MGI SNP Detail
Alliance Variant
Chr3:53048033 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1900 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs226419641
MGI SNP Detail
Alliance Variant
Chr3:53048045 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1888 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245191147
MGI SNP Detail
Alliance Variant
Chr3:53048052 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1881 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs213456376
MGI SNP Detail
Alliance Variant
Chr3:53048114 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1819 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30335596
MGI SNP Detail
Alliance Variant
Chr3:53048203 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1730 bp proximal
SNP C/G C C C C C C C C C C G C C C
rs583853594
MGI SNP Detail
Alliance Variant
Chr3:53048224 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1709 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30335599
MGI SNP Detail
Alliance Variant
Chr3:53048240 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1693 bp proximal
SNP A/G A A A G G A G A A G G G G G G A A
rs218058383
MGI SNP Detail
Alliance Variant
Chr3:53048297 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1636 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs233925362
MGI SNP Detail
Alliance Variant
Chr3:53048407 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1526 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs251538510
MGI SNP Detail
Alliance Variant
Chr3:53048433 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1500 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220308443
MGI SNP Detail
Alliance Variant
Chr3:53048442 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1491 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T A T T T T T T T T T T T T
rs30335602
MGI SNP Detail
Alliance Variant
Chr3:53048455 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1478 bp proximal
SNP A/G G G G G G G G G A G G G
rs256908837
MGI SNP Detail
Alliance Variant
Chr3:53048461 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1472 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs220808350
MGI SNP Detail
Alliance Variant
Chr3:53048464 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1469 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs240860657
MGI SNP Detail
Alliance Variant
Chr3:53048473 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1460 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs266056129
MGI SNP Detail
Alliance Variant
Chr3:53048482 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1451 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs222296760
MGI SNP Detail
Alliance Variant
Chr3:53048488 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1445 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs241265989
MGI SNP Detail
Alliance Variant
Chr3:53048499 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1434 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs259044335
MGI SNP Detail
Alliance Variant
Chr3:53048515 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1418 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs226481327
MGI SNP Detail
Alliance Variant
Chr3:53048549 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1384 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs255077664
MGI SNP Detail
Alliance Variant
Chr3:53048567 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1366 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs587446407
MGI SNP Detail
Alliance Variant
Chr3:53048591 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1342 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs261861348
MGI SNP Detail
Alliance Variant
Chr3:53048592 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1341 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs228470622
MGI SNP Detail
Alliance Variant
Chr3:53048595 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1338 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254846526
MGI SNP Detail
Alliance Variant
Chr3:53048604 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1329 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs218213625
MGI SNP Detail
Alliance Variant
Chr3:53048605 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1328 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30328115
MGI SNP Detail
Alliance Variant
Chr3:53048621 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1312 bp proximal
SNP C/T T T T T T T T T T C T T
rs30328118
MGI SNP Detail
Alliance Variant
Chr3:53048673 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1260 bp proximal
SNP C/G G G G G G G G G G G C G G C G
rs581560991
MGI SNP Detail
Alliance Variant
Chr3:53048706 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1227 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs584947474
MGI SNP Detail
Alliance Variant
Chr3:53048711 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1222 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs214773307
MGI SNP Detail
Alliance Variant
Chr3:53048795 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1138 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs578875410
MGI SNP Detail
Alliance Variant
Chr3:53048827 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1106 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs30328121
MGI SNP Detail
Alliance Variant
Chr3:53048930 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1003 bp proximal
SNP C/T T T T T T T T C T C T
rs261716697
MGI SNP Detail
Alliance Variant
Chr3:53048931 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1002 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220747812
MGI SNP Detail
Alliance Variant
Chr3:53048974 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 959 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235999049
MGI SNP Detail
Alliance Variant
Chr3:53048989 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 944 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260697916
MGI SNP Detail
Alliance Variant
Chr3:53049008 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 925 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs222367081
MGI SNP Detail
Alliance Variant
Chr3:53049014 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 919 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs30328964
MGI SNP Detail
Alliance Variant
Chr3:53049069 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 864 bp proximal
SNP A/G A A A A A A A A A G A A G A
rs30328967
MGI SNP Detail
Alliance Variant
Chr3:53049086 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 847 bp proximal
SNP A/T T T T T T T T T T T A T T A T
rs30328970
MGI SNP Detail
Alliance Variant
Chr3:53049155 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 778 bp proximal
SNP C/T C C C C C C C C C C C C C T C
rs220268766
MGI SNP Detail
Alliance Variant
Chr3:53049156 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 777 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs243056531
MGI SNP Detail
Alliance Variant
Chr3:53049178 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 755 bp proximal
SNP A/C/T T T T T T T T T T T T T T T T T T T T C T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs30328973
MGI SNP Detail
Alliance Variant
Chr3:53049187 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 746 bp proximal
SNP C/T C C C C C C C C C C T C C T C
rs30329856
MGI SNP Detail
Alliance Variant
Chr3:53049215 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 718 bp proximal
SNP C/T C C C C C C C C C C T C C T C
rs260405586
MGI SNP Detail
Alliance Variant
Chr3:53049240 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 693 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs259175106
MGI SNP Detail
Alliance Variant
Chr3:53049302 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 631 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227683943
MGI SNP Detail
Alliance Variant
Chr3:53049320 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 613 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs245328992
MGI SNP Detail
Alliance Variant
Chr3:53049390 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 543 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214428030
MGI SNP Detail
Alliance Variant
Chr3:53049436 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 497 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30329859
MGI SNP Detail
Alliance Variant
Chr3:53049464 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 469 bp proximal
SNP A/G G G G G G G G G G G A G G A G
rs30329862
MGI SNP Detail
Alliance Variant
Chr3:53049499 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 434 bp proximal
SNP C/T C C C C C C C C C C C C C T C
rs212629787
MGI SNP Detail
Alliance Variant
Chr3:53049523 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 410 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240573543
MGI SNP Detail
Alliance Variant
Chr3:53049526 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 407 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs264115768
MGI SNP Detail
Alliance Variant
Chr3:53049527 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 406 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216462284
MGI SNP Detail
Alliance Variant
Chr3:53049565 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 368 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs234514498
MGI SNP Detail
Alliance Variant
Chr3:53049628 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 305 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30330665
MGI SNP Detail
Alliance Variant
Chr3:53049735 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 198 bp proximal
SNP C/T T T T T T T T T T T C T T C T
rs219950314
MGI SNP Detail
Alliance Variant
Chr3:53049779 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 154 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs245956026
MGI SNP Detail
Alliance Variant
Chr3:53049823 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 110 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256239048
MGI SNP Detail
Alliance Variant
Chr3:53049829 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 104 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30330668
MGI SNP Detail
Alliance Variant
Chr3:53050009 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 within coordinates of
SNP C/G G G G G G G G G G G C G G C G
rs248205151
MGI SNP Detail
Alliance Variant
Chr3:53050056 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs581173406
MGI SNP Detail
Alliance Variant
Chr3:53050059 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs259269441
MGI SNP Detail
Alliance Variant
Chr3:53050063 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs227738068
MGI SNP Detail
Alliance Variant
Chr3:53050068 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs30370580
MGI SNP Detail
Alliance Variant
Chr3:53050076 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 within coordinates of
SNP A/G A A A A G G G
rs256412464
MGI SNP Detail
Alliance Variant
Chr3:53050117 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs230029933
MGI SNP Detail
Alliance Variant
Chr3:53050159 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254724807
MGI SNP Detail
Alliance Variant
Chr3:53050191 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212391620
MGI SNP Detail
Alliance Variant
Chr3:53050206 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 8 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30330671
MGI SNP Detail
Alliance Variant
Chr3:53050230 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 32 bp distal
SNP A/G A A A A A A A A A G A A G A
rs235654963
MGI SNP Detail
Alliance Variant
Chr3:53050247 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 49 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248281563
MGI SNP Detail
Alliance Variant
Chr3:53050262 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 64 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs216132296
MGI SNP Detail
Alliance Variant
Chr3:53050268 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 70 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30331414
MGI SNP Detail
Alliance Variant
Chr3:53050306 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 108 bp distal
SNP G/T G G G G G G G G G G T G G T G
rs30331417
MGI SNP Detail
Alliance Variant
Chr3:53050467 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 269 bp distal
SNP C/T T T T T T T T T T T C T T C T
rs214124373
MGI SNP Detail
Alliance Variant
Chr3:53050549 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 351 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs235865159
MGI SNP Detail
Alliance Variant
Chr3:53050619 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 421 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261571540
MGI SNP Detail
Alliance Variant
Chr3:53050695 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 497 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs220369392
MGI SNP Detail
Alliance Variant
Chr3:53050712 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 514 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs251200608
MGI SNP Detail
Alliance Variant
Chr3:53050748 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 550 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs252561097
MGI SNP Detail
Alliance Variant
Chr3:53050764 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 566 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs221331133
MGI SNP Detail
Alliance Variant
Chr3:53050770 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 572 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs239439694
MGI SNP Detail
Alliance Variant
Chr3:53050773 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 575 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256481969
MGI SNP Detail
Alliance Variant
Chr3:53050801 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 603 bp distal
SNP A/G/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30331420
MGI SNP Detail
Alliance Variant
Chr3:53050802 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 604 bp distal
SNP C/T T T T T T T T T T T C C T T C T
rs242256370
MGI SNP Detail
Alliance Variant
Chr3:53050877 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 679 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs3675509
MGI SNP Detail
Alliance Variant
Chr3:53050926 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 728 bp distal
SNP A/G A A A G G A G A G G G G G A G G A A A
rs107819389
MGI SNP Detail
Alliance Variant
Chr3:53050933 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 735 bp distal
SNP A/G G G A
rs30332295
MGI SNP Detail
Alliance Variant
Chr3:53050939 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 741 bp distal
SNP G/T G G G G G G G G G T G G G G
rs248353200
MGI SNP Detail
Alliance Variant
Chr3:53050977 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 779 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs216203534
MGI SNP Detail
Alliance Variant
Chr3:53051016 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 818 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227628089
MGI SNP Detail
Alliance Variant
Chr3:53051046 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 848 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246276293
MGI SNP Detail
Alliance Variant
Chr3:53051056 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 858 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs30332298
MGI SNP Detail
Alliance Variant
Chr3:53051098 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 900 bp distal
SNP A/T T T T T T T T T T T A T T T T
rs214500513
MGI SNP Detail
Alliance Variant
Chr3:53051196 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 998 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs237704226
MGI SNP Detail
Alliance Variant
Chr3:53051202 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1004 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249574654
MGI SNP Detail
Alliance Variant
Chr3:53051203 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1005 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs30332301
MGI SNP Detail
Alliance Variant
Chr3:53051209 Lhfpl6 Intron
Lhfpl6 Noncoding-Transcript-Variant
Rr576651 1011 bp distal
SNP A/G G G G G G G G G G G G A G
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Showing SNP(s) 1 - 100 of 129

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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