Rr576663 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr576663
regulatory region 576663
MGI:8038795

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs30353568 MGI SNP Detail Alliance Variant	Chr3:53131104	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1980 bp proximal	SNP	C/T		C			C	C		C					C								T									C					C	C				C		T
rs234628474 MGI SNP Detail Alliance Variant	Chr3:53131147	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1937 bp proximal	SNP	C/T																																C																		T
rs30353571 MGI SNP Detail Alliance Variant	Chr3:53131225	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1859 bp proximal	SNP	A/G						A		A					A								A									A					G	A				A		A
rs220721526 MGI SNP Detail Alliance Variant	Chr3:53131266	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1818 bp proximal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs232060967 MGI SNP Detail Alliance Variant	Chr3:53131271	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1813 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs255058444 MGI SNP Detail Alliance Variant	Chr3:53131313	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1771 bp proximal	SNP	C/T																																C																		T
rs30354254 MGI SNP Detail Alliance Variant	Chr3:53131351	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1733 bp proximal	SNP	A/G						A		A					A								A									A					G	A				A		A
rs265614150 MGI SNP Detail Alliance Variant	Chr3:53131376	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1708 bp proximal	SNP	C/G																																C																		G
rs30354257 MGI SNP Detail Alliance Variant	Chr3:53131384	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1700 bp proximal	SNP	C/T						C		C					C								T									C		C			C	C				C		T								T
rs244093310 MGI SNP Detail Alliance Variant	Chr3:53131392	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1692 bp proximal	SNP	C/T																																C																		T
rs214540176 MGI SNP Detail Alliance Variant	Chr3:53131418	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1666 bp proximal	SNP	C/T																																C																		T
rs230170891 MGI SNP Detail Alliance Variant	Chr3:53131459	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1625 bp proximal	SNP	A/G																																A																		G
rs254429404 MGI SNP Detail Alliance Variant	Chr3:53131470	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1614 bp proximal	SNP	G/T																																G																		T
rs30354260 MGI SNP Detail Alliance Variant	Chr3:53131485	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1599 bp proximal	SNP	A/G					G	G		G		G			G								G									G					G	G				G		A
rs226946584 MGI SNP Detail Alliance Variant	Chr3:53131527	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1557 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs585202850 MGI SNP Detail Alliance Variant	Chr3:53131566	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1518 bp proximal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T	T	T	T	G	T	T	T	T	T	G	T	T	T	T	T	T		G	T	T	T	T	T	T	T	T	T	T	T	T
rs30345365 MGI SNP Detail Alliance Variant	Chr3:53131583	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1501 bp proximal	SNP	C/T					T	T		T		T			T																	T					C	T				T		C
rs262091966 MGI SNP Detail Alliance Variant	Chr3:53131596	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1488 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A		G	A	A	A	A	A	A	A	A	A	A	A	A
rs228568465 MGI SNP Detail Alliance Variant	Chr3:53131599	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1485 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs248980304 MGI SNP Detail Alliance Variant	Chr3:53131612	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1472 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T		C	T	T	T	T	T	T	T	T	T	T	T	T
rs30345368 MGI SNP Detail Alliance Variant	Chr3:53131619	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1465 bp proximal	SNP	C/G						C		C					C								C									C					G	C				C		C
rs30345371 MGI SNP Detail Alliance Variant	Chr3:53131623	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1461 bp proximal	SNP	A/G					G	G		G					G								G									G					G	G				G		A
rs218795839 MGI SNP Detail Alliance Variant	Chr3:53131680	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1404 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	T	C	C	C	T	C
rs228035673 MGI SNP Detail Alliance Variant	Chr3:53131683	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1401 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs245684230 MGI SNP Detail Alliance Variant	Chr3:53131696	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1388 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	A	G	G	G	A	G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs214828337 MGI SNP Detail Alliance Variant	Chr3:53131699	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1385 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G	T	T	G	G	G	G	T	G	T	G	G	G	T	G	G	G	G	G	G		T	G	G	G	G	G	G	T	T	G	G	T	T
rs232119746 MGI SNP Detail Alliance Variant	Chr3:53131705	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1379 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	G	G	A	A	A	A	G	A	G	A	A	A	G	A	A	A	A	A	A		G	A	A	A	A	A	A	G	G	A	A	G	G
rs249633285 MGI SNP Detail Alliance Variant	Chr3:53131708	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1376 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs218098110 MGI SNP Detail Alliance Variant	Chr3:53131716	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1368 bp proximal	SNP	A/G																																G																		A
rs212726399 MGI SNP Detail Alliance Variant	Chr3:53131783	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1301 bp proximal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	G	C	C	C	C
rs243188429 MGI SNP Detail Alliance Variant	Chr3:53131790	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1294 bp proximal	SNP	C/T																																C																		T
rs261048928 MGI SNP Detail Alliance Variant	Chr3:53131794	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1290 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T	T	T	T	C	T	T	T	T	T	C	T	T	T	T	T	T		C	T	T	T	T	T	T	T	C	T	T	T	T
rs226385160 MGI SNP Detail Alliance Variant	Chr3:53131809	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1275 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs258615178 MGI SNP Detail Alliance Variant	Chr3:53131844	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1240 bp proximal	SNP	A/G																																G																		A
rs252920586 MGI SNP Detail Alliance Variant	Chr3:53131852	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1232 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs220311805 MGI SNP Detail Alliance Variant	Chr3:53131853	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1231 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A	A	A	A	G	A	A	A	A	A	G	A	A	A	A	A	A		G	A	A	A	A	A	A	A	G	A	A	A	A
rs108678144 MGI SNP Detail Alliance Variant	Chr3:53131856	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1228 bp proximal	SNP	A/G				G	G																					G						A																		G
rs264952615 MGI SNP Detail Alliance Variant	Chr3:53131862	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1222 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs228047436 MGI SNP Detail Alliance Variant	Chr3:53131864	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1220 bp proximal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T	T	T	T	G	T	T	T	T	T	G	T	T	T	T	T	T		G	T	T	T	T	T	T	T	G	T	T	T	T
rs251728039 MGI SNP Detail Alliance Variant	Chr3:53131901	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1183 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G	G	G	G	A	G	G	G	G	G	A	G	G	G	G	G	G		A	G	G	G	G	G	G	G	A	G	G	G	G
rs579128495 MGI SNP Detail Alliance Variant	Chr3:53132052	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 1032 bp proximal	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs30346264 MGI SNP Detail Alliance Variant	Chr3:53132140	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 944 bp proximal	SNP	A/G		A			A	A		A		A			A								G					A	A			A					G	A				A		G												A
rs231507251 MGI SNP Detail Alliance Variant	Chr3:53132179	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 905 bp proximal	SNP	C/G																																C																		G
rs251946840 MGI SNP Detail Alliance Variant	Chr3:53132203	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 881 bp proximal	SNP	A/G																																G																		A
rs214895715 MGI SNP Detail Alliance Variant	Chr3:53132205	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 879 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs225777092 MGI SNP Detail Alliance Variant	Chr3:53132244	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 840 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs30346267 MGI SNP Detail Alliance Variant	Chr3:53132278	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 806 bp proximal	SNP	A/G		G			G	G		G		G			G								G					G	G			G		G			G	G				G		G								A				A
rs241906861 MGI SNP Detail Alliance Variant	Chr3:53132317	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 767 bp proximal	SNP	A/G																																A																		G
rs30346270 MGI SNP Detail Alliance Variant	Chr3:53132354	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 730 bp proximal	SNP	A/C		C			C	A				C											A					C	C			A		A			A					A										C
rs30346273 MGI SNP Detail Alliance Variant	Chr3:53132367	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 717 bp proximal	SNP	G/T		T			T					T			G								T					T	T					G			T	G														T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs247465996 MGI SNP Detail Alliance Variant	Chr3:53132372	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 712 bp proximal	SNP	C/T																																T																		C
rs30347206 MGI SNP Detail Alliance Variant	Chr3:53132377	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 707 bp proximal	SNP	C/T		T			T	C				T											C					T	T			C		C			C	C				C										C				C
rs252992016 MGI SNP Detail Alliance Variant	Chr3:53132380	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 704 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs220368083 MGI SNP Detail Alliance Variant	Chr3:53132390	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 694 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs30347209 MGI SNP Detail Alliance Variant	Chr3:53132401	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 683 bp proximal	SNP	C/T		C			C	C		C		C			C								C					C				C					C	C				C		T												C
rs30347212 MGI SNP Detail Alliance Variant	Chr3:53132478	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 606 bp proximal	SNP	C/T		T			T	T		T		T			T													T	T			T		T			C	T				T										C
rs30348005 MGI SNP Detail Alliance Variant	Chr3:53132521	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 563 bp proximal	SNP	A/T		A			A	A		A		A			A													A	A			A						A				A		T
rs220544768 MGI SNP Detail Alliance Variant	Chr3:53132522	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 562 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs30348008 MGI SNP Detail Alliance Variant	Chr3:53132531	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 553 bp proximal	SNP	C/G		G			G	G		G		G			G								C					G	G			G		G				G				G		G								C				C
rs265999708 MGI SNP Detail Alliance Variant	Chr3:53132552	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 532 bp proximal	SNP	A/C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs221598953 MGI SNP Detail Alliance Variant	Chr3:53132563	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 521 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs239817621 MGI SNP Detail Alliance Variant	Chr3:53132564	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 520 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	G	G	A	A	A	A	G	A		A	A	A	G	A	A	A	A	A	A		G	A	A	A	A	A	A	G	A	A	A	G	A
rs256948421 MGI SNP Detail Alliance Variant	Chr3:53132567	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 517 bp proximal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G	C	C	G	G	G	G	C	G		G	G	G	C	G	G	G	G	G	G		C	G	G	G	G	G	G	C	G	G	G	C	G
rs225845555 MGI SNP Detail Alliance Variant	Chr3:53132573	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 511 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	T	T	C	C	C	C	T	C		C	C	C	T	C	C	C	C	C	C		T	C	C	C	C	C	C	T	T	C	C	T	C
rs256604945 MGI SNP Detail Alliance Variant	Chr3:53132586	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 498 bp proximal	SNP	A/G																																A																		G
rs261956569 MGI SNP Detail Alliance Variant	Chr3:53132601	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 483 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs30348011 MGI SNP Detail Alliance Variant	Chr3:53132602	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 482 bp proximal	SNP	C/T		C			C	C		C		C			C								C					C	C			C					T	C				C		T												C
rs254653478 MGI SNP Detail Alliance Variant	Chr3:53132613	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 471 bp proximal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	G	C	C	C	C
rs223759257 MGI SNP Detail Alliance Variant	Chr3:53132653	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 431 bp proximal	SNP	A/G																																G																		A
rs250057648 MGI SNP Detail Alliance Variant	Chr3:53132665	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 419 bp proximal	SNP	C/T																																C																		T
rs218378381 MGI SNP Detail Alliance Variant	Chr3:53132686	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 398 bp proximal	SNP	C/T																																C																		T
rs30348774 MGI SNP Detail Alliance Variant	Chr3:53132727	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 357 bp proximal	SNP	A/G		A			A	A		A		A			A								G					A	A			A		A				A				A		G								G				G
rs30348777 MGI SNP Detail Alliance Variant	Chr3:53132742	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 342 bp proximal	SNP	C/T		C			C	C		C		C			C								T					C	C			C		C			T	C				C		T								T				T
rs30348780 MGI SNP Detail Alliance Variant	Chr3:53132774	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 310 bp proximal	SNP	A/C		A			A	A		A		A			A								C					A	A			A		A			A	A				A		A								C				C
rs220459814 MGI SNP Detail Alliance Variant	Chr3:53132792	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 292 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs243519634 MGI SNP Detail Alliance Variant	Chr3:53132806	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 278 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs260533806 MGI SNP Detail Alliance Variant	Chr3:53132807	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 277 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs231725857 MGI SNP Detail Alliance Variant	Chr3:53132858	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 226 bp proximal	SNP	A/G																																A																		G
rs30348783 MGI SNP Detail Alliance Variant	Chr3:53132859	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 225 bp proximal	SNP	A/C/G		C			C	C				C																C	C			C		A			C	C						G								C				C
rs257020858 MGI SNP Detail Alliance Variant	Chr3:53132860	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 224 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs30349696 MGI SNP Detail Alliance Variant	Chr3:53132886	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 198 bp proximal	SNP	A/G		G			G	G		G		G			G								G					G	G			G		G			G	G				G		G								A				A
rs30349699 MGI SNP Detail Alliance Variant	Chr3:53132892	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 192 bp proximal	SNP	A/G		G			G	G		G		G			G								G					G	G			G					G	G				G		A												G
rs242805874 MGI SNP Detail Alliance Variant	Chr3:53132920	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 164 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs264779738 MGI SNP Detail Alliance Variant	Chr3:53132961	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 123 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs227231669 MGI SNP Detail Alliance Variant	Chr3:53132978	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 106 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs30349702 MGI SNP Detail Alliance Variant	Chr3:53133085	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 within coordinates of	SNP	A/G		G			G	G		G		G			G								A					G	G			G					G	G				G														G
rs260600707 MGI SNP Detail Alliance Variant	Chr3:53133142	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 within coordinates of	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs30350525 MGI SNP Detail Alliance Variant	Chr3:53133144	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 within coordinates of	SNP	C/T		C			C	C		C		C			C								T					C	C			C					C	C				C		C												C
rs246341835 MGI SNP Detail Alliance Variant	Chr3:53133200	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs214228974 MGI SNP Detail Alliance Variant	Chr3:53133275	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 within coordinates of	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs30350528 MGI SNP Detail Alliance Variant	Chr3:53133384	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 within coordinates of	SNP	C/G		G			G	G		G		G			G								C					G	G			G					C	G				G		G												G
rs30350531 MGI SNP Detail Alliance Variant	Chr3:53133479	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 within coordinates of	SNP	A/C		A			A	C		C		A			C													A	A			C		C				C				C		C								C				C
rs30351274 MGI SNP Detail Alliance Variant	Chr3:53133521	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 within coordinates of	SNP	A/G		A			A	A		A		A			A								G					A	A			A					G	A				A		A												A
rs240367361 MGI SNP Detail Alliance Variant	Chr3:53133579	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs579868953 MGI SNP Detail Alliance Variant	Chr3:53133635	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 within coordinates of	SNP	A/T	T	T	T		T	A	T	A	A	T	A	A	A	T	T	T	T	T	T	T	A	A	A	A	T	T	T	T	A	A	A	A	T	T	A	A	A	A	A	A	T		A	A	T	A	A	T	T			A	T	A	A
rs252907457 MGI SNP Detail Alliance Variant	Chr3:53133676	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs216265556 MGI SNP Detail Alliance Variant	Chr3:53133766	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs233143177 MGI SNP Detail Alliance Variant	Chr3:53133790	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs260036372 MGI SNP Detail Alliance Variant	Chr3:53133806	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 within coordinates of	SNP	A/C																																C																		A
rs226879529 MGI SNP Detail Alliance Variant	Chr3:53133808	Lhfpl6 Intron Lhfpl6 Noncoding-Transcript-Variant Rr576663 within coordinates of	SNP	G																																G																		G

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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