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Mouse SNP Summary
Symbol
Name
ID
Rr576960
regulatory region 576960
MGI:8039092

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30593303
MGI SNP Detail
Alliance Variant
Chr3:55437271 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1915 bp proximal
SNP A/G A A A A A A A A A A G A A G A
rs244620437
MGI SNP Detail
Alliance Variant
Chr3:55437281 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1905 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs30594145
MGI SNP Detail
Alliance Variant
Chr3:55437300 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1886 bp proximal
SNP A/G G G G G G G G G G G A G G A G
rs30594147
MGI SNP Detail
Alliance Variant
Chr3:55437334 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1852 bp proximal
SNP A/G G G G G G G G G G G G G G A G
rs30594149
MGI SNP Detail
Alliance Variant
Chr3:55437350 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1836 bp proximal
SNP C/T T T T T T T T T T T C T T C T
rs30594151
MGI SNP Detail
Alliance Variant
Chr3:55437412 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1774 bp proximal
SNP A/G G G G G G G G G G G A G G A G
rs226829241
MGI SNP Detail
Alliance Variant
Chr3:55437426 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1760 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244501640
MGI SNP Detail
Alliance Variant
Chr3:55437464 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1722 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214168668
MGI SNP Detail
Alliance Variant
Chr3:55437536 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1650 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236316488
MGI SNP Detail
Alliance Variant
Chr3:55437699 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1487 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs30594153
MGI SNP Detail
Alliance Variant
Chr3:55437719 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1467 bp proximal
SNP A/G A A A A A A A A A A G A A G A
rs212219903
MGI SNP Detail
Alliance Variant
Chr3:55437747 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1439 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30595085
MGI SNP Detail
Alliance Variant
Chr3:55437755 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1431 bp proximal
SNP A/G A A A A A A A A A G A A G A
rs30595087
MGI SNP Detail
Alliance Variant
Chr3:55437776 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1410 bp proximal
SNP A/G G G G A G G G A A A G G A A G A A A
rs222095659
MGI SNP Detail
Alliance Variant
Chr3:55437796 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1390 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30595089
MGI SNP Detail
Alliance Variant
Chr3:55437823 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1363 bp proximal
SNP A/G G G G G G G G G G G A G G G G
rs30595091
MGI SNP Detail
Alliance Variant
Chr3:55437832 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1354 bp proximal
SNP A/G G G G G G G G G G G G G G A G
rs222605362
MGI SNP Detail
Alliance Variant
Chr3:55437909 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1277 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241841323
MGI SNP Detail
Alliance Variant
Chr3:55437939 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1247 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264470967
MGI SNP Detail
Alliance Variant
Chr3:55437999 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1187 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229044012
MGI SNP Detail
Alliance Variant
Chr3:55438071 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1115 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30595093
MGI SNP Detail
Alliance Variant
Chr3:55438074 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1112 bp proximal
SNP A/G A A A A A A G A A A G A A A
rs30595995
MGI SNP Detail
Alliance Variant
Chr3:55438091 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1095 bp proximal
SNP A/G G G A G G G G A A G G G A G G A A
rs30595997
MGI SNP Detail
Alliance Variant
Chr3:55438129 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1057 bp proximal
SNP A/T A A A A A A T A A A T A A T A
rs586276400
MGI SNP Detail
Alliance Variant
Chr3:55438146 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1040 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30595999
MGI SNP Detail
Alliance Variant
Chr3:55438166 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1020 bp proximal
SNP A/G A A A A A A G A A A G A A G A
rs30596001
MGI SNP Detail
Alliance Variant
Chr3:55438189 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 997 bp proximal
SNP C/T C C C C C C T C C C T C C T C
rs229171779
MGI SNP Detail
Alliance Variant
Chr3:55438224 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 962 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs30596003
MGI SNP Detail
Alliance Variant
Chr3:55438241 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 945 bp proximal
SNP A/G G G G G G G G G G G A G G A G
rs212290367
MGI SNP Detail
Alliance Variant
Chr3:55438254 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 932 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs236570966
MGI SNP Detail
Alliance Variant
Chr3:55438283 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 903 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254653673
MGI SNP Detail
Alliance Variant
Chr3:55438485 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 701 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs216071822
MGI SNP Detail
Alliance Variant
Chr3:55438504 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 682 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234295657
MGI SNP Detail
Alliance Variant
Chr3:55438581 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 605 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262591733
MGI SNP Detail
Alliance Variant
Chr3:55438623 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 563 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30596765
MGI SNP Detail
Alliance Variant
Chr3:55438666 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 520 bp proximal
SNP A/G G G G G G G G G G G A G G A G
rs237515841
MGI SNP Detail
Alliance Variant
Chr3:55438768 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576959 within coordinates of
Rr576960 418 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs30596767
MGI SNP Detail
Alliance Variant
Chr3:55438777 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576959 within coordinates of
Rr576960 409 bp proximal
SNP A/C C C C C C C A C C C C C C C C
rs222332743
MGI SNP Detail
Alliance Variant
Chr3:55438817 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576959 within coordinates of
Rr576960 369 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs240506411
MGI SNP Detail
Alliance Variant
Chr3:55438818 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576959 within coordinates of
Rr576960 368 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30596769
MGI SNP Detail
Alliance Variant
Chr3:55438851 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576959 within coordinates of
Rr576960 335 bp proximal
SNP A/C C C C C C C C C C C A C C A C
rs220536620
MGI SNP Detail
Alliance Variant
Chr3:55438879 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576959 within coordinates of
Rr576960 307 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs30596770
MGI SNP Detail
Alliance Variant
Chr3:55438897 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576959 within coordinates of
Rr576960 289 bp proximal
SNP C/G C C C G C C C G G C C G G C G G G
rs30596772
MGI SNP Detail
Alliance Variant
Chr3:55438918 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576959 within coordinates of
Rr576960 268 bp proximal
SNP A/T T T T A T T T A A A T T A A T A A A
rs228738425
MGI SNP Detail
Alliance Variant
Chr3:55439003 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576959 within coordinates of
Rr576960 183 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs252462987
MGI SNP Detail
Alliance Variant
Chr3:55439008 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576959 within coordinates of
Rr576960 178 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30597704
MGI SNP Detail
Alliance Variant
Chr3:55439040 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576959 within coordinates of
Rr576960 146 bp proximal
SNP A/G G G G A G G G A A A G G A A G A A A
rs30597706
MGI SNP Detail
Alliance Variant
Chr3:55439090 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 96 bp proximal
SNP A/G G G A G G G A A A G G A A G A A
rs248076302
MGI SNP Detail
Alliance Variant
Chr3:55439119 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 67 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs30597708
MGI SNP Detail
Alliance Variant
Chr3:55439127 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 59 bp proximal
SNP A/G A A G A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216103631
MGI SNP Detail
Alliance Variant
Chr3:55439129 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 57 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs30597710
MGI SNP Detail
Alliance Variant
Chr3:55439130 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 56 bp proximal
SNP A/T T T T T T T A A T T A T A A
rs49561374
MGI SNP Detail
Alliance Variant
Chr3:55439137 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 49 bp proximal
SNP A/G G G A G A
rs214477417
MGI SNP Detail
Alliance Variant
Chr3:55439185 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235794930
MGI SNP Detail
Alliance Variant
Chr3:55439186 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261234329
MGI SNP Detail
Alliance Variant
Chr3:55439199 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs223078493
MGI SNP Detail
Alliance Variant
Chr3:55439207 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234020995
MGI SNP Detail
Alliance Variant
Chr3:55439212 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251631397
MGI SNP Detail
Alliance Variant
Chr3:55439216 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220568044
MGI SNP Detail
Alliance Variant
Chr3:55439223 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246562284
MGI SNP Detail
Alliance Variant
Chr3:55439244 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs30597712
MGI SNP Detail
Alliance Variant
Chr3:55439247 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 within coordinates of
SNP A/G G G G A G G G A G G G A G G A
rs48185172
MGI SNP Detail
Alliance Variant
Chr3:55439250 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 within coordinates of
SNP C/T C C T C T
rs241003467
MGI SNP Detail
Alliance Variant
Chr3:55439260 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs30598534
MGI SNP Detail
Alliance Variant
Chr3:55439303 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 2 bp distal
SNP A/C C C C C C C C C C C C C C C A
rs30598536
MGI SNP Detail
Alliance Variant
Chr3:55439419 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 118 bp distal
SNP A/G A A A G A A A G G G A A G G A G G G
rs248108111
MGI SNP Detail
Alliance Variant
Chr3:55439567 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 266 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs259963029
MGI SNP Detail
Alliance Variant
Chr3:55439579 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 278 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs231819569
MGI SNP Detail
Alliance Variant
Chr3:55439683 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 382 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30598538
MGI SNP Detail
Alliance Variant
Chr3:55439702 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 401 bp distal
SNP A/G G G G G G G A G G G G G G G G
rs214021357
MGI SNP Detail
Alliance Variant
Chr3:55439797 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 496 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229617295
MGI SNP Detail
Alliance Variant
Chr3:55439814 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 513 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs30598540
MGI SNP Detail
Alliance Variant
Chr3:55439827 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 526 bp distal
SNP A/G A A A G A A A G G A A G G A G G G
rs217613611
MGI SNP Detail
Alliance Variant
Chr3:55439925 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 624 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs234712539
MGI SNP Detail
Alliance Variant
Chr3:55439930 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 629 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251664725
MGI SNP Detail
Alliance Variant
Chr3:55440075 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 774 bp distal
Rr576961 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214829706
MGI SNP Detail
Alliance Variant
Chr3:55440174 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 873 bp distal
Rr576961 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236660494
MGI SNP Detail
Alliance Variant
Chr3:55440175 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 874 bp distal
Rr576961 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs261910494
MGI SNP Detail
Alliance Variant
Chr3:55440182 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 881 bp distal
Rr576961 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs221188607
MGI SNP Detail
Alliance Variant
Chr3:55440189 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 888 bp distal
Rr576961 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs243891018
MGI SNP Detail
Alliance Variant
Chr3:55440228 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 927 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs255110577
MGI SNP Detail
Alliance Variant
Chr3:55440233 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 932 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs222661594
MGI SNP Detail
Alliance Variant
Chr3:55440236 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 935 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs241205107
MGI SNP Detail
Alliance Variant
Chr3:55440260 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 959 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30598542
MGI SNP Detail
Alliance Variant
Chr3:55440361 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1060 bp distal
SNP A/G A A A A A A G A A A G A A G A
rs232286296
MGI SNP Detail
Alliance Variant
Chr3:55440442 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1141 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs244204088
MGI SNP Detail
Alliance Variant
Chr3:55440544 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1243 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265127137
MGI SNP Detail
Alliance Variant
Chr3:55440555 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1254 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs228984269
MGI SNP Detail
Alliance Variant
Chr3:55440567 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1266 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs242593174
MGI SNP Detail
Alliance Variant
Chr3:55440586 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1285 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs217480250
MGI SNP Detail
Alliance Variant
Chr3:55440690 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1389 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228843419
MGI SNP Detail
Alliance Variant
Chr3:55440708 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1407 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30599294
MGI SNP Detail
Alliance Variant
Chr3:55440731 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1430 bp distal
SNP C/T T T T T T T C T T T T T T T T
rs216162029
MGI SNP Detail
Alliance Variant
Chr3:55440734 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1433 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30599296
MGI SNP Detail
Alliance Variant
Chr3:55440867 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1566 bp distal
SNP A/T A A A A A A A A A A T A A T A
rs30503224
MGI SNP Detail
Alliance Variant
Chr3:55440882 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1581 bp distal
SNP G/T G G G T G T
rs213012357
MGI SNP Detail
Alliance Variant
Chr3:55440900 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1599 bp distal
SNP A/C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs229725176
MGI SNP Detail
Alliance Variant
Chr3:55440950 Dclk1 Intron
Dclk1 Noncoding-Transcript-Variant
Rr576960 1649 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255152982
MGI SNP Detail
Alliance Variant
Chr3:55441101 Dclk1 Coding-Synonymous
Dclk1 mRNA-UTR
Dclk1 Noncoding-Transcript-Variant
Rr576960 1800 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs222492611
MGI SNP Detail
Alliance Variant
Chr3:55441271 Dclk1 mRNA-UTR
Dclk1 Noncoding-Transcript-Variant
Rr576960 1970 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
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Showing SNP(s) 1 - 100 of 100

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory