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Mouse SNP Summary
Symbol
Name
ID 		Rr577171
regulatory region 577171
MGI:8039303

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30756820
MGI SNP Detail
Alliance Variant		 Chr3:57753741 Pfn2 Intron
Rr577168 within coordinates of
Rr577171 1794 bp proximal
 SNP G/T T G T G T G
rs30428879
MGI SNP Detail
Alliance Variant		 Chr3:57753930 Pfn2 Intron
Rr577171 1605 bp proximal
 SNP A/G G A G A
rs230806426
MGI SNP Detail
Alliance Variant		 Chr3:57753976 Pfn2 Intron
Rr577171 1559 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31147191
MGI SNP Detail
Alliance Variant		 Chr3:57754074 Pfn2 Intron
Rr577171 1461 bp proximal
 SNP C/T T C C T C
rs29974860
MGI SNP Detail
Alliance Variant		 Chr3:57754104 Pfn2 Intron
Rr577171 1431 bp proximal
 SNP A/T A T ? A T
rs250436051
MGI SNP Detail
Alliance Variant		 Chr3:57754122 Pfn2 Intron
Rr577171 1413 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263672817
MGI SNP Detail
Alliance Variant		 Chr3:57754305 Cpgi13199 within coordinates of
Pfn2 Intron
Pfn2 mRNA-UTR
Rr577171 1230 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224053069
MGI SNP Detail
Alliance Variant		 Chr3:57754309 Cpgi13199 within coordinates of
Pfn2 Intron
Pfn2 mRNA-UTR
Rr577171 1226 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs239555455
MGI SNP Detail
Alliance Variant		 Chr3:57754354 Cpgi13199 within coordinates of
Pfn2 Intron
Pfn2 mRNA-UTR
Rr577171 1181 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31283304
MGI SNP Detail
Alliance Variant		 Chr3:57754384 Cpgi13199 within coordinates of
Pfn2 Intron
Pfn2 mRNA-UTR
Rr577171 1151 bp proximal
 SNP C/T C T C
rs224981851
MGI SNP Detail
Alliance Variant		 Chr3:57754460 Cpgi13199 within coordinates of
Pfn2 Intron
Pfn2 mRNA-UTR
Rr577171 1075 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs237145581
MGI SNP Detail
Alliance Variant		 Chr3:57754602 Cpgi13199 within coordinates of
Pfn2 Intron
Rr577169 within coordinates of
Rr577171 933 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs266063215
MGI SNP Detail
Alliance Variant		 Chr3:57754627 Cpgi13199 within coordinates of
Pfn2 Intron
Rr577169 within coordinates of
Rr577171 908 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232810942
MGI SNP Detail
Alliance Variant		 Chr3:57754648 Cpgi13199 within coordinates of
Pfn2 Intron
Rr577169 within coordinates of
Rr577171 887 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs257975293
MGI SNP Detail
Alliance Variant		 Chr3:57754916 Cpgi13199 within coordinates of
Pfn2 mRNA-UTR
Rr577169 within coordinates of
Rr577171 619 bp proximal
Tssr33340 within coordinates of
 SNP C/T C C T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C T T C C C T C C
rs215356710
MGI SNP Detail
Alliance Variant		 Chr3:57755169 Cpgi13199 within coordinates of
Pfn2 mRNA-UTR
Rr577169 within coordinates of
Rr577171 366 bp proximal
Tssr33342 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs583404327
MGI SNP Detail
Alliance Variant		 Chr3:57755376 Cpgi13199 within coordinates of
Gm66316 within coordinates of
Pfn2 mRNA-UTR
Rr577169 within coordinates of
Rr577171 159 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs232478651
MGI SNP Detail
Alliance Variant		 Chr3:57755405 Cpgi13199 within coordinates of
Gm66316 within coordinates of
Pfn2 mRNA-UTR
Rr577169 within coordinates of
Rr577171 130 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs244772364
MGI SNP Detail
Alliance Variant		 Chr3:57755429 Cpgi13199 within coordinates of
Gm66316 within coordinates of
Pfn2 mRNA-UTR
Rr577169 within coordinates of
Rr577171 106 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs213894678
MGI SNP Detail
Alliance Variant		 Chr3:57755441 Cpgi13199 within coordinates of
Gm66316 within coordinates of
Pfn2 mRNA-UTR
Rr577169 within coordinates of
Rr577171 94 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A G A A A A
rs231071443
MGI SNP Detail
Alliance Variant		 Chr3:57755449 Cpgi13199 within coordinates of
Gm66316 within coordinates of
Pfn2 mRNA-UTR
Rr577169 within coordinates of
Rr577171 86 bp proximal
 SNP A/C/T C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C A C C C C C C A C C C C C C C T C C C C
rs248528535
MGI SNP Detail		 Chr3:57755537 Cpgi13199 within coordinates of
Gm66316 within coordinates of
Rr577171 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219240527
MGI SNP Detail		 Chr3:57755564 Cpgi13199 within coordinates of
Gm66316 within coordinates of
Rr577171 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs263469790
MGI SNP Detail		 Chr3:57755678 Cpgi13199 within coordinates of
Gm66316 within coordinates of
Rr577171 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs224344257
MGI SNP Detail		 Chr3:57755687 Cpgi13199 within coordinates of
Gm66316 within coordinates of
Rr577171 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239874484
MGI SNP Detail		 Chr3:57755707 Gm66316 within coordinates of
Rr577171 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs251135037
MGI SNP Detail		 Chr3:57755733 Gm66316 within coordinates of
Rr577171 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs218747640
MGI SNP Detail		 Chr3:57755786 Gm66316 within coordinates of
Rr577171 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs237209869
MGI SNP Detail		 Chr3:57755893 Gm66316 within coordinates of
Rr577171 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs264393124
MGI SNP Detail		 Chr3:57756022 Gm66316 within coordinates of
Rr577171 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233681738
MGI SNP Detail		 Chr3:57756121 Gm66316 within coordinates of
Rr577171 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245922413
MGI SNP Detail		 Chr3:57756124 Gm66316 within coordinates of
Rr577171 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs265448101
MGI SNP Detail		 Chr3:57756134 Gm66316 within coordinates of
Rr577171 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs225902997
MGI SNP Detail		 Chr3:57756207 Gm66316 within coordinates of
Rr577171 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs243594876
MGI SNP Detail		 Chr3:57756344 Gm66316 within coordinates of
Rr577171 112 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213953295
MGI SNP Detail		 Chr3:57756367 Gm66316 within coordinates of
Rr577171 135 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224695053
MGI SNP Detail		 Chr3:57756388 Gm66316 within coordinates of
Rr577171 156 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs580109805
MGI SNP Detail		 Chr3:57756418 Gm66316 within coordinates of
Rr577171 186 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242668768
MGI SNP Detail		 Chr3:57756699 Gm66316 within coordinates of
Rr577171 467 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219713620
MGI SNP Detail		 Chr3:57756741 Gm66316 within coordinates of
Rr577171 509 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs242198158
MGI SNP Detail		 Chr3:57756768 Gm66316 within coordinates of
Rr577171 536 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs587364623
MGI SNP Detail		 Chr3:57756858 Gm66316 within coordinates of
Rr577171 626 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs259573173
MGI SNP Detail		 Chr3:57756912 Gm66316 within coordinates of
Rr577171 680 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs216231639
MGI SNP Detail		 Chr3:57756925 Gm66316 within coordinates of
Rr577171 693 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs233130499
MGI SNP Detail		 Chr3:57757031 Gm66316 within coordinates of
Rr577171 799 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251366179
MGI SNP Detail		 Chr3:57757157 Gm66316 within coordinates of
Rr577171 925 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30842894
MGI SNP Detail		 Chr3:57757185 Gm66316 within coordinates of
Rr577171 953 bp distal
 SNP A/G G A G A G A
rs237022336
MGI SNP Detail		 Chr3:57757204 Gm66316 within coordinates of
Rr577171 972 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264216163
MGI SNP Detail		 Chr3:57757261 Gm66316 within coordinates of
Rr577171 1029 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225698630
MGI SNP Detail		 Chr3:57757265 Gm66316 within coordinates of
Rr577171 1033 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248889911
MGI SNP Detail		 Chr3:57757340 Gm66316 within coordinates of
Rr577171 1108 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs263029356
MGI SNP Detail		 Chr3:57757441 Gm66316 within coordinates of
Rr577171 1209 bp distal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs219783565
MGI SNP Detail		 Chr3:57757475 Gm66316 within coordinates of
Rr577171 1243 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs580852608
MGI SNP Detail		 Chr3:57757497 Gm66316 within coordinates of
Rr577171 1265 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A A A A A A A A A A A A A
rs583054127
MGI SNP Detail		 Chr3:57757508 Gm66316 within coordinates of
Rr577171 1276 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs586999119
MGI SNP Detail		 Chr3:57757537 Gm66316 within coordinates of
Rr577171 1305 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T T T T T T T A T T T T T T T A T T T T
rs581192486
MGI SNP Detail		 Chr3:57757541 Gm66316 within coordinates of
Rr577171 1309 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A G A A A A A A A G A A A A
rs584488687
MGI SNP Detail		 Chr3:57757547 Gm66316 within coordinates of
Rr577171 1315 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G G
rs237334300
MGI SNP Detail		 Chr3:57757583 Gm66316 within coordinates of
Rr577171 1351 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A G A A A A A A A A A A A A
rs579089391
MGI SNP Detail		 Chr3:57757610 Gm66316 within coordinates of
Rr577171 1378 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C C C C C C C C C C C C
rs581293088
MGI SNP Detail		 Chr3:57757613 Gm66316 within coordinates of
Rr577171 1381 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C C C C C C C C C C C C
rs584879350
MGI SNP Detail		 Chr3:57757697 Gm66316 within coordinates of
Rr577171 1465 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254401478
MGI SNP Detail		 Chr3:57757859 Gm66316 within coordinates of
Rr577171 1627 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31390313
MGI SNP Detail		 Chr3:57757958 Gm66316 within coordinates of
Rr577171 1726 bp distal
 SNP A/G A A G A A A A G G G A A G A A G A
rs249330633
MGI SNP Detail		 Chr3:57758003 Gm66316 within coordinates of
Rr577171 1771 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30002778
MGI SNP Detail		 Chr3:57758004 Gm66316 within coordinates of
Rr577171 1772 bp distal
 SNP G/T G T T G T
rs233489986
MGI SNP Detail		 Chr3:57758063 Gm66316 within coordinates of
Rr577171 1831 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49572356
MGI SNP Detail		 Chr3:57758069 Gm66316 within coordinates of
Rr577171 1837 bp distal
 SNP C/G G G G G G G C G G G C G G G
rs215294976
MGI SNP Detail		 Chr3:57758158 Gm66316 within coordinates of
Rr577171 1926 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
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Showing SNP(s) 1 - 69 of 69
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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