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Mouse SNP Summary
Symbol
Name
ID 		Rr577222
regulatory region 577222
MGI:8039354

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Showing SNP(s) 1 - 31 of 31

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30760489
MGI SNP Detail		 Chr3:58320590 Gm65073 within coordinates of
Rr577222 1936 bp proximal
 SNP C/T T T T T T C T T T C T T C T
rs30760491
MGI SNP Detail		 Chr3:58320666 Gm65073 within coordinates of
Rr577222 1860 bp proximal
 SNP G/T T T T T T T T G T T G T
rs226094322
MGI SNP Detail		 Chr3:58320904 Gm65073 within coordinates of
Rr577222 1622 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246088401
MGI SNP Detail		 Chr3:58320925 Gm65073 within coordinates of
Rr577222 1601 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256974510
MGI SNP Detail		 Chr3:58320987 Gm65073 within coordinates of
Rr577222 1539 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219745472
MGI SNP Detail		 Chr3:58321288 Gm65073 within coordinates of
Rr577222 1238 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237203424
MGI SNP Detail		 Chr3:58321290 Gm65073 within coordinates of
Rr577222 1236 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A T A A A A A A A A A A A A
rs254357461
MGI SNP Detail		 Chr3:58321401 Gm65073 within coordinates of
Rr577222 1125 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs229277770
MGI SNP Detail		 Chr3:58321405 Gm65073 within coordinates of
Rr577222 1121 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253454840
MGI SNP Detail		 Chr3:58321524 Gm65073 within coordinates of
Rr577222 1002 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs264557071
MGI SNP Detail		 Chr3:58321777 Cpgi13200 within coordinates of
Gm65073 within coordinates of
Rr577221 within coordinates of
Rr577222 749 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234411437
MGI SNP Detail		 Chr3:58321905 Cpgi13200 within coordinates of
Gm65073 within coordinates of
Rr577221 within coordinates of
Rr577222 621 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247364255
MGI SNP Detail		 Chr3:58321996 Cpgi13200 within coordinates of
Gm65073 within coordinates of
Rr577221 within coordinates of
Rr577222 530 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs215364588
MGI SNP Detail		 Chr3:58322070 Cpgi13200 within coordinates of
Gm65073 within coordinates of
Rr577221 within coordinates of
Rr577222 456 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232907674
MGI SNP Detail		 Chr3:58322101 Cpgi13200 within coordinates of
Rr577221 within coordinates of
Rr577222 425 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs245048365
MGI SNP Detail
Alliance Variant		 Chr3:58322510 Cpgi13200 within coordinates of
Rr577222 16 bp proximal
Tsc22d2 mRNA-UTR
Tsc22d2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs213393887
MGI SNP Detail
Alliance Variant		 Chr3:58322964 Cpgi13200 within coordinates of
Rr577222 417 bp distal
Tsc22d2 mRNA-UTR
Tsc22d2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234642686
MGI SNP Detail
Alliance Variant		 Chr3:58322992 Cpgi13200 within coordinates of
Rr577222 445 bp distal
Tsc22d2 mRNA-UTR
Tsc22d2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs264230767
MGI SNP Detail
Alliance Variant		 Chr3:58323142 Cpgi13200 within coordinates of
Rr577222 595 bp distal
Tsc22d2 Coding-Synonymous
Tsc22d2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225586419
MGI SNP Detail
Alliance Variant		 Chr3:58323154 Cpgi13200 within coordinates of
Rr577222 607 bp distal
Tsc22d2 Coding-Synonymous
Tsc22d2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240877132
MGI SNP Detail
Alliance Variant		 Chr3:58323409 Cpgi13200 within coordinates of
Rr577222 862 bp distal
Tsc22d2 Coding-Synonymous
Tsc22d2 Noncoding-Transcript-Variant
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs250992186
MGI SNP Detail
Alliance Variant		 Chr3:58323951 Cpgi13200 within coordinates of
Rr577222 1404 bp distal
Tsc22d2 Coding-NonSynonymous
Tsc22d2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs219853606
MGI SNP Detail
Alliance Variant		 Chr3:58323964 Cpgi13200 within coordinates of
Rr577222 1417 bp distal
Tsc22d2 Coding-Synonymous
Tsc22d2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237321673
MGI SNP Detail
Alliance Variant		 Chr3:58324030 Cpgi13200 within coordinates of
Rr577222 1483 bp distal
Tsc22d2 Coding-Synonymous
Tsc22d2 Noncoding-Transcript-Variant
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A C A A A A
rs254317919
MGI SNP Detail
Alliance Variant		 Chr3:58324046 Cpgi13200 within coordinates of
Rr577222 1499 bp distal
Tsc22d2 Coding-NonSynonymous
Tsc22d2 Noncoding-Transcript-Variant
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219758255
MGI SNP Detail
Alliance Variant		 Chr3:58324063 Cpgi13200 within coordinates of
Rr577222 1516 bp distal
Tsc22d2 Coding-Synonymous
Tsc22d2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241606565
MGI SNP Detail
Alliance Variant		 Chr3:58324144 Cpgi13200 within coordinates of
Rr577222 1597 bp distal
Tsc22d2 Coding-Synonymous
Tsc22d2 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A G A A A A
rs266245213
MGI SNP Detail
Alliance Variant		 Chr3:58324154 Cpgi13200 within coordinates of
Rr577222 1607 bp distal
Tsc22d2 Coding-NonSynonymous
Tsc22d2 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs387851593
MGI SNP Detail
Alliance Variant		 Chr3:58324180 Cpgi13200 within coordinates of
Rr577222 1633 bp distal
Tsc22d2 Coding-Synonymous
Tsc22d2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C T C C C C C C C C C C C C C C C T C C C C C C T C C
rs233335595
MGI SNP Detail
Alliance Variant		 Chr3:58324207 Cpgi13200 within coordinates of
Rr577222 1660 bp distal
Tsc22d2 Coding-Synonymous
Tsc22d2 Noncoding-Transcript-Variant
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C G C C C C
rs241536177
MGI SNP Detail
Alliance Variant		 Chr3:58324349 Cpgi13200 within coordinates of
Rr577222 1802 bp distal
Tsc22d2 Coding-NonSynonymous
Tsc22d2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 31 of 31
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory