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Mouse SNP Summary
Symbol
Name
ID
Rr577248
regulatory region 577248
MGI:8039380

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579342944
MGI SNP Detail
Alliance Variant
Chr3:58431126 Rr577248 1881 bp proximal
Serp1 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246445101
MGI SNP Detail
Alliance Variant
Chr3:58431381 Rr577248 1626 bp proximal
Serp1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs582763708
MGI SNP Detail
Alliance Variant
Chr3:58431421 Rr577248 1586 bp proximal
Serp1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs259411925
MGI SNP Detail
Alliance Variant
Chr3:58431495 Rr577248 1512 bp proximal
Serp1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs232751797
MGI SNP Detail
Alliance Variant
Chr3:58431524 Rr577248 1483 bp proximal
Serp1 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs257764586
MGI SNP Detail
Alliance Variant
Chr3:58431563 Rr577248 1444 bp proximal
Serp1 Intron
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G G G G G G G G C G G G G G G G C G G G G
rs215033512
MGI SNP Detail
Alliance Variant
Chr3:58431625 Rr577248 1382 bp proximal
Serp1 Intron
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A A A A A A A A C A A A A A A A C A A A A
rs238460182
MGI SNP Detail
Alliance Variant
Chr3:58431677 Rr577248 1330 bp proximal
Serp1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs244404004
MGI SNP Detail
Alliance Variant
Chr3:58431692 Rr577248 1315 bp proximal
Serp1 Intron
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs212289149
MGI SNP Detail
Alliance Variant
Chr3:58431693 Rr577248 1314 bp proximal
Serp1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs30761399
MGI SNP Detail
Alliance Variant
Chr3:58431829 Rr577248 1178 bp proximal
Serp1 Intron
SNP A/C C C A C
rs236450065
MGI SNP Detail
Alliance Variant
Chr3:58431956 Rr577248 1051 bp proximal
Serp1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs254537176
MGI SNP Detail
Alliance Variant
Chr3:58431971 Rr577248 1036 bp proximal
Serp1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs30761401
MGI SNP Detail
Alliance Variant
Chr3:58432005 Rr577248 1002 bp proximal
Serp1 Intron
SNP C/T T C
rs237827162
MGI SNP Detail
Alliance Variant
Chr3:58432067 Rr577248 940 bp proximal
Serp1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs262441608
MGI SNP Detail
Alliance Variant
Chr3:58432156 Rr577248 851 bp proximal
Serp1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs49055117
MGI SNP Detail
Alliance Variant
Chr3:58432257 Rr577248 750 bp proximal
Serp1 Intron
SNP A/T A T T T
rs236612757
MGI SNP Detail
Alliance Variant
Chr3:58432320 Rr577248 687 bp proximal
Serp1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253692510
MGI SNP Detail
Alliance Variant
Chr3:58432457 Rr577248 550 bp proximal
Serp1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs222491789
MGI SNP Detail
Alliance Variant
Chr3:58432582 Cpgi13201 within coordinates of
Rr577248 425 bp proximal
Serp1 Intron
Serp1 Splice-Site
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs240488610
MGI SNP Detail
Alliance Variant
Chr3:58432666 Cpgi13201 within coordinates of
Rr577248 341 bp proximal
Serp1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263393176
MGI SNP Detail
Alliance Variant
Chr3:58432693 Cpgi13201 within coordinates of
Rr577248 314 bp proximal
Serp1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T C C C C C C T C C C C C C C T C C C C
rs231756969
MGI SNP Detail
Alliance Variant
Chr3:58432747 Cpgi13201 within coordinates of
Rr577248 260 bp proximal
Serp1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs245743516
MGI SNP Detail
Alliance Variant
Chr3:58432749 Cpgi13201 within coordinates of
Rr577248 258 bp proximal
Serp1 Intron
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs265391150
MGI SNP Detail
Alliance Variant
Chr3:58432763 Cpgi13201 within coordinates of
Rr577247 within coordinates of
Rr577248 244 bp proximal
Serp1 Intron
SNP A/G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs226049132
MGI SNP Detail
Alliance Variant
Chr3:58432794 Cpgi13201 within coordinates of
Rr577247 within coordinates of
Rr577248 213 bp proximal
Serp1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs244570381
MGI SNP Detail
Alliance Variant
Chr3:58432915 Cpgi13201 within coordinates of
Rr577247 within coordinates of
Rr577248 92 bp proximal
Serp1 mRNA-UTR
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T C T T T T T T T C T T T
rs212229276
MGI SNP Detail
Alliance Variant
Chr3:58432932 Cpgi13201 within coordinates of
Rr577247 within coordinates of
Rr577248 75 bp proximal
Serp1 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C
rs13465384
MGI SNP Detail
Alliance Variant
Chr3:58433040 Cpgi13201 within coordinates of
Rr577247 within coordinates of
Rr577248 12 bp distal
Serp1 mRNA-UTR
SNP C/G C G C G G G
rs13465383
MGI SNP Detail
Alliance Variant
Chr3:58433107 Cpgi13201 within coordinates of
Rr577247 within coordinates of
Rr577248 79 bp distal
Serp1 mRNA-UTR
SNP A/C C C C A A A
rs216738871
MGI SNP Detail
Alliance Variant
Chr3:58433332 Cpgi13201 within coordinates of
Eif2a mRNA-UTR
Rr397681 within coordinates of
Rr577248 304 bp distal
Rr577249 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240067886
MGI SNP Detail
Alliance Variant
Chr3:58433393 Cpgi13201 within coordinates of
Eif2a mRNA-UTR
Rr397681 within coordinates of
Rr577248 365 bp distal
Rr577249 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257833477
MGI SNP Detail
Alliance Variant
Chr3:58433559 Cpgi13201 within coordinates of
Eif2a Intron
Rr577248 531 bp distal
Rr577249 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs214224607
MGI SNP Detail
Alliance Variant
Chr3:58433832 Eif2a Intron
Eif2a mRNA-UTR
Rr577248 804 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs230584555
MGI SNP Detail
Alliance Variant
Chr3:58433843 Eif2a Intron
Eif2a mRNA-UTR
Rr577248 815 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31424567
MGI SNP Detail
Alliance Variant
Chr3:58433861 Eif2a Intron
Eif2a Splice-Site
Rr577248 833 bp distal
SNP A/G A G G G
rs222574774
MGI SNP Detail
Alliance Variant
Chr3:58433932 Eif2a Intron
Rr577248 904 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240578258
MGI SNP Detail
Alliance Variant
Chr3:58433991 Eif2a Intron
Rr577248 963 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T T G T T T T T T T T T T T T
rs31089707
MGI SNP Detail
Alliance Variant
Chr3:58434052 Eif2a Intron
Rr577248 1024 bp distal
SNP A/G G G A A A
rs223863446
MGI SNP Detail
Alliance Variant
Chr3:58434055 Eif2a Intron
Rr577248 1027 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246543749
MGI SNP Detail
Alliance Variant
Chr3:58434121 Eif2a Intron
Rr577248 1093 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs262958542
MGI SNP Detail
Alliance Variant
Chr3:58434133 Eif2a Intron
Rr577248 1105 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs226181449
MGI SNP Detail
Alliance Variant
Chr3:58434173 Eif2a Intron
Rr577248 1145 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs238326873
MGI SNP Detail
Alliance Variant
Chr3:58434185 Eif2a Intron
Rr577248 1157 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs256258766
MGI SNP Detail
Alliance Variant
Chr3:58434241 Eif2a Intron
Rr577248 1213 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G A G G G G G G A G G G G G G G A G G G G
rs229488469
MGI SNP Detail
Alliance Variant
Chr3:58434299 Eif2a Intron
Rr577248 1271 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254038735
MGI SNP Detail
Alliance Variant
Chr3:58434314 Eif2a Intron
Rr577248 1286 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217424691
MGI SNP Detail
Alliance Variant
Chr3:58434315 Eif2a Intron
Rr577248 1287 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs231710925
MGI SNP Detail
Alliance Variant
Chr3:58434359 6720482G16Rik within coordinates of
Eif2a Intron
Rr577248 1331 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs256407196
MGI SNP Detail
Alliance Variant
Chr3:58434424 6720482G16Rik within coordinates of
Eif2a Intron
Rr577248 1396 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213705294
MGI SNP Detail
Alliance Variant
Chr3:58434459 6720482G16Rik within coordinates of
Eif2a Intron
Rr577248 1431 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs585396130
MGI SNP Detail
Alliance Variant
Chr3:58434483 6720482G16Rik within coordinates of
Eif2a Intron
Rr577248 1455 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30499469
MGI SNP Detail
Alliance Variant
Chr3:58434487 6720482G16Rik within coordinates of
Eif2a Intron
Rr577248 1459 bp distal
SNP A/G G G G A A A
rs217203103
MGI SNP Detail
Alliance Variant
Chr3:58434557 6720482G16Rik within coordinates of
Eif2a Intron
Rr577248 1529 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs234180178
MGI SNP Detail
Alliance Variant
Chr3:58434576 6720482G16Rik within coordinates of
Eif2a Intron
Rr577248 1548 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs259187683
MGI SNP Detail
Alliance Variant
Chr3:58434644 6720482G16Rik within coordinates of
Eif2a Intron
Rr577248 1616 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223962081
MGI SNP Detail
Alliance Variant
Chr3:58434726 6720482G16Rik within coordinates of
Eif2a Intron
Rr577248 1698 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C
rs243714939
MGI SNP Detail
Alliance Variant
Chr3:58434772 6720482G16Rik within coordinates of
Eif2a Intron
Rr577248 1744 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs261846129
MGI SNP Detail
Alliance Variant
Chr3:58434815 6720482G16Rik within coordinates of
Eif2a Intron
Rr577248 1787 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs218594272
MGI SNP Detail
Alliance Variant
Chr3:58434864 6720482G16Rik within coordinates of
Eif2a Intron
Rr577248 1836 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238413045
MGI SNP Detail
Alliance Variant
Chr3:58434877 6720482G16Rik within coordinates of
Eif2a Intron
Rr577248 1849 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T G T T T T T T T T T T T T
rs256389301
MGI SNP Detail
Alliance Variant
Chr3:58434963 6720482G16Rik within coordinates of
Eif2a Intron
Rr577248 1935 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs223707609
MGI SNP Detail
Alliance Variant
Chr3:58435008 6720482G16Rik within coordinates of
Eif2a Intron
Rr577248 1980 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs250551939
MGI SNP Detail
Alliance Variant
Chr3:58435018 6720482G16Rik within coordinates of
Eif2a Intron
Rr577248 1990 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 64 of 64

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory