Rr577289 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr577289
regulatory region 577289
MGI:8039421

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Showing SNP(s) 1 - 100 of 112

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs30100089 MGI SNP Detail Alliance Variant	Chr3:58788334	Clrn1 Intron Rr577289 1956 bp proximal	SNP	G/T		T				T															T														G	T				T		G												T
rs30100088 MGI SNP Detail Alliance Variant	Chr3:58788341	Clrn1 Intron Rr577289 1949 bp proximal	SNP	C/T		T				T		C		C			C								T					C				C		C				T				C		T								C				T
rs249786378 MGI SNP Detail Alliance Variant	Chr3:58788356	Clrn1 Intron Rr577289 1934 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs227070248 MGI SNP Detail Alliance Variant	Chr3:58788382	Clrn1 Intron Rr577289 1908 bp proximal	SNP	A																																A																		A
rs225711031 MGI SNP Detail Alliance Variant	Chr3:58788411	Clrn1 Intron Rr577289 1879 bp proximal	SNP	C/T	C	C	C		C	C	C							C	C	C	C	C	C	C	C		C	C			C		C		C		C		C	C			C				C		C		T		C		C		C	C
rs30113260 MGI SNP Detail Alliance Variant	Chr3:58788421	Clrn1 Intron Rr577289 1869 bp proximal	SNP	C/G				G	C											G
rs265364501 MGI SNP Detail Alliance Variant	Chr3:58788423	Clrn1 Intron Rr577289 1867 bp proximal	SNP	C/G	G	G	G		G	G	G							G	G	G	G	G	G	G	G		G	G			G				G		G		C	G			G				G	C	G		G		G		C		G	G
rs225547629 MGI SNP Detail Alliance Variant	Chr3:58788425	Clrn1 Intron Rr577289 1865 bp proximal	SNP	C/T	T	T	T		T	T	T	C	C	C	C		C	T	T	T	T	T	T	T	T	C	T	C	C	C	T	C		C	T	C	T	C	C	T	C	C	T	C	C		C	C	T	C	C	C	T	C	C	C	T	T	C
rs243255323 MGI SNP Detail Alliance Variant	Chr3:58788467	Clrn1 Intron Rr577289 1823 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs254021116 MGI SNP Detail Alliance Variant	Chr3:58788485	Clrn1 Intron Rr577289 1805 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs229368842 MGI SNP Detail Alliance Variant	Chr3:58788498	Clrn1 Intron Rr577289 1792 bp proximal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		G	C	C	C	C	C	C	C	C	C	C	C	C
rs259309537 MGI SNP Detail Alliance Variant	Chr3:58788538	Clrn1 Intron Rr577289 1752 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		G	A	A	A	A	A	A	A	A	A	A	A	A
rs216774544 MGI SNP Detail Alliance Variant	Chr3:58788622	Clrn1 Intron Rr577289 1668 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs30100087 MGI SNP Detail Alliance Variant	Chr3:58788633	Clrn1 Intron Rr577289 1657 bp proximal	SNP	A/G		A		A	G	A				G			G			A					A					G						G			G	A				G		G								G				A
rs30101848 MGI SNP Detail Alliance Variant	Chr3:58788653	Clrn1 Intron Rr577289 1637 bp proximal	SNP	C/T				T	C											T										C
rs30996247 MGI SNP Detail Alliance Variant	Chr3:58788657	Clrn1 Intron Rr577289 1633 bp proximal	SNP	A/G				A	G											A										G
rs30157437 MGI SNP Detail Alliance Variant	Chr3:58788662	Clrn1 Intron Rr577289 1628 bp proximal	SNP	A/G				G	A											G										A
rs30100086 MGI SNP Detail Alliance Variant	Chr3:58788669	Clrn1 Intron Rr577289 1621 bp proximal	SNP	C/T					C	T															T						C									T						T
rs30100085 MGI SNP Detail Alliance Variant	Chr3:58788715	Clrn1 Intron Rr577289 1575 bp proximal	SNP	A/G		G				G		G		G			G								G					G				G					G	G				G		G												A
rs30100084 MGI SNP Detail Alliance Variant	Chr3:58788737	Clrn1 Intron Rr577289 1553 bp proximal	SNP	A/G		A				A		A		A			A								A					A				A					A	A				A		G												A
rs217231317 MGI SNP Detail Alliance Variant	Chr3:58788761	Clrn1 Intron Rr577289 1529 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs30099243 MGI SNP Detail Alliance Variant	Chr3:58788824	Clrn1 Intron Rr577289 1466 bp proximal	SNP	C/T		T		T	T	T		C		C			C								T					C				C		C			C	T				C		C								C				T
rs263187445 MGI SNP Detail Alliance Variant	Chr3:58788863	Clrn1 Intron Rr577289 1427 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs223866037 MGI SNP Detail Alliance Variant	Chr3:58788887	Clrn1 Intron Rr577289 1403 bp proximal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		T	A	A	A	A	A	A	A	A	A	A	A	A
rs248406759 MGI SNP Detail Alliance Variant	Chr3:58788890	Clrn1 Intron Rr577289 1400 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs30099242 MGI SNP Detail Alliance Variant	Chr3:58788914	Clrn1 Intron Rr577289 1376 bp proximal	SNP	A/T		A		A		A		T		T			T								A					T				T		T			A	A				T		A								T				A
rs30099241 MGI SNP Detail Alliance Variant	Chr3:58788992	Clrn1 Intron Rr577289 1298 bp proximal	SNP	A/G		A		A		A		G		G			G								A					G				G		G			G	A				G		G								G				A
rs237005922 MGI SNP Detail Alliance Variant	Chr3:58789012	Clrn1 Intron Rr577289 1278 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs49888555 MGI SNP Detail Alliance Variant	Chr3:58789031	Clrn1 Intron Rr577289 1259 bp proximal	SNP	C/T				T																						C						C																		C
rs235225728 MGI SNP Detail Alliance Variant	Chr3:58789052	Clrn1 Intron Rr577289 1238 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A		G	A	A	A	A
rs247589651 MGI SNP Detail Alliance Variant	Chr3:58789122	Clrn1 Intron Rr577289 1168 bp proximal	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs49558273 MGI SNP Detail Alliance Variant	Chr3:58789239	Clrn1 Intron Rr577289 1051 bp proximal	SNP	A/G				G	G																					A						G																		A
rs51100456 MGI SNP Detail Alliance Variant	Chr3:58789252	Clrn1 Intron Rr577289 1038 bp proximal	SNP	C/T				T	T																					C						T																		C
rs49928369 MGI SNP Detail Alliance Variant	Chr3:58789259	Clrn1 Intron Rr577289 1031 bp proximal	SNP	G/T				G	G																					T
rs50608606 MGI SNP Detail Alliance Variant	Chr3:58789267	Clrn1 Intron Rr577289 1023 bp proximal	SNP	C/T					T																					C
rs224934633 MGI SNP Detail Alliance Variant	Chr3:58789291	Clrn1 Intron Rr577289 999 bp proximal	SNP	A/G	A	A	A		A	A	A	G	G	G	G	G	G	A	A	A	A	A	A	A	A	G	A	A	G	G	A	G	G	G	A	G	A	G	G	A	G	G	A	G	G		A	G	A	G	G	G	A	G	A	G	A	A	G
rs243455726 MGI SNP Detail Alliance Variant	Chr3:58789293	Clrn1 Intron Rr577289 997 bp proximal	SNP	C/T	C	C	C		C	C	C	T	T	T	T	T	T	C	C	C	C	C	C	C	C	T	C	C	T	T	C	T	T	T	C	T	C	T	T	C	T	T	C	T	T		C	T	C	T	T	T	C	T	C	T	C	C	T
rs217285099 MGI SNP Detail Alliance Variant	Chr3:58789294	Clrn1 Intron Rr577289 996 bp proximal	SNP	A/G	A	A	A		A	A	A	G	G	G	G		G	A	A	A	A	A	A	A	A	G	A	A	G	G	A	G	G	G	A	G	A	G	G	A	G	G	A	G	G		A	G	A	G	G	G	A	G	A	G	A	A	G
rs49404731 MGI SNP Detail Alliance Variant	Chr3:58789325	Clrn1 Intron Rr577289 965 bp proximal	SNP	C/T					C																					T
rs582741690 MGI SNP Detail Alliance Variant	Chr3:58789332	Clrn1 Intron Rr577289 958 bp proximal	SNP	C/T	T	T	T		T	T	T	C	C	C	C	C	C	T	T	T	T	T	T	T	T	C	T	T	C	C	T	C	C	C	T	C	T	C	C	T	C	C	T	C	C		T	C	T	C	C	C	T	C	T	C	T	T	C
rs578472733 MGI SNP Detail Alliance Variant	Chr3:58789335	Clrn1 Intron Rr577289 955 bp proximal	SNP	C/T	C	C	C		C	C	C	T	T	T		T	T	C	C	C	C	C	C	C	C	T	C	C	T	T	C	T	C	T	C		C	T	C	C	T	T	C		T		C	T	C	T	T	T	C		C	T	C	C
rs581826480 MGI SNP Detail Alliance Variant	Chr3:58789337	Clrn1 Intron Rr577289 953 bp proximal	SNP	C/T	C	C	C		C	C	C	T	T	T		T	T	C	C	C	C	C	C	C	C		C	C	T		C	T	T		C		C	T		C	T	T	C		T		C	T	C	T	T	T	C		C	T	C	C
rs49111628 MGI SNP Detail Alliance Variant	Chr3:58789342	Clrn1 Intron Rr577289 948 bp proximal	SNP	A/C				A	A																					C						C																		A
rs241819657 MGI SNP Detail Alliance Variant	Chr3:58789398	Clrn1 Intron Rr577289 892 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs30099240 MGI SNP Detail Alliance Variant	Chr3:58789467	Clrn1 Intron Rr577289 823 bp proximal	SNP	A/G		G			G	G		A		A			A								G					A				A		A				G				A										A				G
rs30099239 MGI SNP Detail Alliance Variant	Chr3:58789470	Clrn1 Intron Rr577289 820 bp proximal	SNP	A/G		G				G															G					G									A	G						A												G
rs30099238 MGI SNP Detail Alliance Variant	Chr3:58789518	Clrn1 Intron Rr577289 772 bp proximal	SNP	A/T		A			A	A		T		T			T								A					T				T		T			T	A				T		A								T				A
rs51608140 MGI SNP Detail Alliance Variant	Chr3:58789532	Clrn1 Intron Rr577289 758 bp proximal	SNP	A/G					A																					G						G																		G
rs50320818 MGI SNP Detail Alliance Variant	Chr3:58789553	Clrn1 Intron Rr577289 737 bp proximal	SNP	A/G					G																					A						A																		A
rs48109739 MGI SNP Detail Alliance Variant	Chr3:58789585	Clrn1 Intron Rr577289 705 bp proximal	SNP	A/G				G	G																					A						A																		A
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs50576679 MGI SNP Detail Alliance Variant	Chr3:58789595	Clrn1 Intron Rr577289 695 bp proximal	SNP	C/T				C	C																					T
rs46526400 MGI SNP Detail Alliance Variant	Chr3:58789598	Clrn1 Intron Rr577289 692 bp proximal	SNP	G/T				T	T																					G
rs30099237 MGI SNP Detail Alliance Variant	Chr3:58789613	Clrn1 Intron Rr577289 677 bp proximal	SNP	C/T		C			C	C				T			T								C					T						T				C				T		C								T				C
rs30099236 MGI SNP Detail Alliance Variant	Chr3:58789656	Clrn1 Intron Rr577289 634 bp proximal	SNP	A/G		A				A		G		G			G								A					G				G		G			A	A				G		A								G				A
rs263692965 MGI SNP Detail Alliance Variant	Chr3:58789709	Clrn1 Intron Rr577289 581 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs585897781 MGI SNP Detail Alliance Variant	Chr3:58789737	Clrn1 Intron Rr577289 553 bp proximal	SNP	C/T	T	T	T		T	T	T	C	C	C	C	C	C	T	T	T	T	T	T	T	T	C	T	T	C	C	T	C	C	C	T	C	T	C	C	T	C	C	T	C	C		T	C	T	C	C	C	T	C	T	C	T	T	C
rs30099235 MGI SNP Detail Alliance Variant	Chr3:58789800	Clrn1 Intron Rr577289 490 bp proximal	SNP	A/G		G				G		A		A			A								G					A				A		A			G	G				A		A								A				G
rs227127124 MGI SNP Detail Alliance Variant	Chr3:58789903	Clrn1 Intron Rr375038 within coordinates of Rr577289 387 bp proximal	SNP	T																																T																		T
rs48590648 MGI SNP Detail Alliance Variant	Chr3:58789910	Clrn1 Intron Rr375038 within coordinates of Rr577289 380 bp proximal	SNP	A/G				G	G																					A						A																		A
rs30099234 MGI SNP Detail Alliance Variant	Chr3:58789972	Clrn1 Intron Rr375038 within coordinates of Rr577289 318 bp proximal	SNP	C/T		C		C	C	C		T		T			T								C					T				T		T			C	C				T		C								T				C
rs579857070 MGI SNP Detail Alliance Variant	Chr3:58789996	Clrn1 Intron Rr375038 within coordinates of Rr577289 294 bp proximal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs243465439 MGI SNP Detail Alliance Variant	Chr3:58790025	Clrn1 Intron Rr375038 within coordinates of Rr577289 265 bp proximal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs266105568 MGI SNP Detail Alliance Variant	Chr3:58790044	Clrn1 Intron Rr375038 within coordinates of Rr577289 246 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		T	C	C	C	C	C	C	C	C	C	C	C	C
rs50981759 MGI SNP Detail Alliance Variant	Chr3:58790070	Clrn1 Intron Rr375038 within coordinates of Rr577289 220 bp proximal	SNP	G/T				T	G																					G						G																		G
rs30098323 MGI SNP Detail Alliance Variant	Chr3:58790186	Clrn1 Intron Rr375038 within coordinates of Rr577289 104 bp proximal	SNP	A/G		A			A	A				G											A					G	A			G		G				A														G				A
rs30098322 MGI SNP Detail Alliance Variant	Chr3:58790231	Clrn1 Intron Rr375038 within coordinates of Rr577289 59 bp proximal	SNP	C/T		T			T	T		C		C			C								T					C	T			C		C				T				C		C								C				T
rs30098321 MGI SNP Detail Alliance Variant	Chr3:58790323	Clrn1 Intron Rr375038 within coordinates of Rr577289 within coordinates of	SNP	A/T		A			A	A		A		A			A								A					A	A			A					T	A				A		A												A
rs238791887 MGI SNP Detail Alliance Variant	Chr3:58790336	Clrn1 Intron Rr375038 within coordinates of Rr577289 within coordinates of	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs243558663 MGI SNP Detail Alliance Variant	Chr3:58790358	Clrn1 Intron Rr375038 within coordinates of Rr577289 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs212521670 MGI SNP Detail Alliance Variant	Chr3:58790375	Clrn1 Intron Rr375038 within coordinates of Rr577289 within coordinates of	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs231049700 MGI SNP Detail Alliance Variant	Chr3:58790395	Clrn1 Intron Rr375038 within coordinates of Rr577289 within coordinates of	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs248501866 MGI SNP Detail Alliance Variant	Chr3:58790445	Clrn1 Intron Rr375038 within coordinates of Rr577289 within coordinates of	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		T	C	C	C	C	C	C	C	C	C	C	C	C
rs227519663 MGI SNP Detail Alliance Variant	Chr3:58790496	Clrn1 Intron Rr375038 within coordinates of Rr577289 within coordinates of	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs239810277 MGI SNP Detail Alliance Variant	Chr3:58790718	Clrn1 Intron Rr375038 within coordinates of Rr577289 within coordinates of	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs263503804 MGI SNP Detail Alliance Variant	Chr3:58790742	Clrn1 Intron Rr375038 within coordinates of Rr577289 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G		G	G	G	G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs30098320 MGI SNP Detail Alliance Variant	Chr3:58790797	Clrn1 Intron Rr375038 within coordinates of Rr577289 49 bp distal	SNP	A/G		G		G	G	G		A		A			A			G					G					A	G			A		A			G	G				A		G								A				G
rs30098319 MGI SNP Detail Alliance Variant	Chr3:58790820	Clrn1 Intron Rr375038 within coordinates of Rr577289 72 bp distal	SNP	A/G		G			G	G		G		G			G								G					G	G			G					G	G				G		A												G
rs30098318 MGI SNP Detail Alliance Variant	Chr3:58790848	Clrn1 Intron Rr375038 within coordinates of Rr577289 100 bp distal	SNP	A/G		A			A	A		G		G			G								A					G	A			G		G			A	A				G		A								G				A
rs49982248 MGI SNP Detail Alliance Variant	Chr3:58790860	Clrn1 Intron Rr375038 within coordinates of Rr577289 112 bp distal	SNP	A/G				G	G																					A						A																		A
rs237189126 MGI SNP Detail Alliance Variant	Chr3:58790972	Clrn1 Intron Rr375038 within coordinates of Rr577289 224 bp distal Rr577290 within coordinates of	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G		T	G	G	G	G
rs30098317 MGI SNP Detail Alliance Variant	Chr3:58791061	Clrn1 Intron Rr375038 within coordinates of Rr577289 313 bp distal Rr577290 within coordinates of	SNP	A/C		A		A	A	A		C					C								A					C	A			C		C			A	A				C		A								C				A
rs30098316 MGI SNP Detail Alliance Variant	Chr3:58791063	Clrn1 Intron Rr375038 within coordinates of Rr577289 315 bp distal Rr577290 within coordinates of	SNP	C/T		C			C	C		C		C			C								C					C	C			C					C	C				C		T												C
rs30098315 MGI SNP Detail Alliance Variant	Chr3:58791168	Clrn1 Intron Rr375038 within coordinates of Rr577289 420 bp distal Rr577290 within coordinates of	SNP	C/T		C		C	C	C		T		T			T			C					C					T	C			T		T			C	C				T		C								T				C
rs30098314 MGI SNP Detail Alliance Variant	Chr3:58791221	Clrn1 Intron Rr375038 within coordinates of Rr577289 473 bp distal	SNP	C/T		C		C	C	C		T		T			T			C					C					T	C			T		T			C	C				T		C								T				C
rs265468912 MGI SNP Detail Alliance Variant	Chr3:58791379	Clrn1 Intron Rr577289 631 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs225889961 MGI SNP Detail Alliance Variant	Chr3:58791384	Clrn1 Intron Rr577289 636 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs30097123 MGI SNP Detail Alliance Variant	Chr3:58791505	Clrn1 Intron Rr577289 757 bp distal	SNP	A/G		G			A	G		A		A			A			G					A					A				A		A				G				A		A								A				A
rs30097122 MGI SNP Detail Alliance Variant	Chr3:58791518	Clrn1 Intron Rr577289 770 bp distal	SNP	C/T		C			C	C		T					T								C					T	C			T		T			C	C				T		C								T				C
rs229620676 MGI SNP Detail Alliance Variant	Chr3:58791544	Clrn1 Intron Rr577289 796 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs30097121 MGI SNP Detail Alliance Variant	Chr3:58791585	Clrn1 Intron Rr577289 837 bp distal	SNP	G/T		T			T	T		G		G			G								T					G	T			G		G			T	T				G		T								G				T
rs219799741 MGI SNP Detail Alliance Variant	Chr3:58791609	Clrn1 Intron Rr577289 861 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs242537237 MGI SNP Detail Alliance Variant	Chr3:58791722	Clrn1 Intron Rr577289 974 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs241252689 MGI SNP Detail Alliance Variant	Chr3:58791750	Clrn1 Intron Rr577289 1002 bp distal	SNP	C/T																																C																		T
rs250888412 MGI SNP Detail Alliance Variant	Chr3:58791758	Clrn1 Intron Rr577289 1010 bp distal	SNP	C/T																																T																		C
rs233071197 MGI SNP Detail Alliance Variant	Chr3:58791782	Clrn1 Intron Rr577289 1034 bp distal	SNP	C/G	C	C	C		C	C	C	G	G	G	G		G	C	C	C	C	C	C	C	C	G	C	C	G	G	C	G		G	C	G	C	G		C	G	G	C	G	G		C	G	C	G	C		C	G	G	G	C	C
rs251350174 MGI SNP Detail Alliance Variant	Chr3:58791809	Clrn1 Intron Rr577289 1061 bp distal	SNP	A/C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	A	G	G	G	C	G	G	G
rs221093649 MGI SNP Detail Alliance Variant	Chr3:58791910	Clrn1 Intron Rr577289 1162 bp distal	SNP	C																																C																		C
rs240373983 MGI SNP Detail Alliance Variant	Chr3:58791913	Clrn1 Intron Rr577289 1165 bp distal	SNP	C																																C																		C
rs30097120 MGI SNP Detail Alliance Variant	Chr3:58791954	Clrn1 Intron Rr577289 1206 bp distal	SNP	A/T		A			A	A		A		A			A								T					A	A			A					A	A				A		A												A
rs30097119 MGI SNP Detail Alliance Variant	Chr3:58791992	Clrn1 Intron Rr577289 1244 bp distal	SNP	A/G		G			G	G		A					A								G					A	G			A		A			G	G				A		G								A				G

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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