About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Rr577315
regulatory region 577315
MGI:8039447

<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 119

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213201060
MGI SNP Detail
Alliance Variant
Chr3:59007237 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1995 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A C A A A A A A A A A A C A A A C A A A A A A A A
rs230261672
MGI SNP Detail
Alliance Variant
Chr3:59007249 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1983 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs253392854
MGI SNP Detail
Alliance Variant
Chr3:59007337 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1895 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A G A A A A A A A A A G A A A G A G G A A A G
rs226406362
MGI SNP Detail
Alliance Variant
Chr3:59007346 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1886 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A G A A A A A A A A A G A A A G A G G A A A G
rs246615837
MGI SNP Detail
Alliance Variant
Chr3:59007351 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1881 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T C T T T T T T C T T T C T C C T T T C
rs262970788
MGI SNP Detail
Alliance Variant
Chr3:59007376 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1856 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223481879
MGI SNP Detail
Alliance Variant
Chr3:59007445 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1787 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238874129
MGI SNP Detail
Alliance Variant
Chr3:59007459 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1773 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs256771368
MGI SNP Detail
Alliance Variant
Chr3:59007482 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1750 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs224153910
MGI SNP Detail
Alliance Variant
Chr3:59007507 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1725 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242646194
MGI SNP Detail
Alliance Variant
Chr3:59007579 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1653 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs260489936
MGI SNP Detail
Alliance Variant
Chr3:59007594 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1638 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G C G G G C G G G G G G C G G G C G G G G G G G G
rs232858810
MGI SNP Detail
Alliance Variant
Chr3:59007597 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1635 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G A G G G A G G G G G G A G G G A G G G G G G G G
rs51890628
MGI SNP Detail
Alliance Variant
Chr3:59007617 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1615 bp proximal
SNP C/G G G G G G G G G G G C G G G G
rs214788671
MGI SNP Detail
Alliance Variant
Chr3:59007657 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1575 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229421946
MGI SNP Detail
Alliance Variant
Chr3:59007658 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1574 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs52039974
MGI SNP Detail
Alliance Variant
Chr3:59007660 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1572 bp proximal
SNP A/G A A A A A A A A A A G A A G A
rs213262549
MGI SNP Detail
Alliance Variant
Chr3:59007690 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1542 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230303257
MGI SNP Detail
Alliance Variant
Chr3:59007693 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1539 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs247741349
MGI SNP Detail
Alliance Variant
Chr3:59007698 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1534 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs578524834
MGI SNP Detail
Alliance Variant
Chr3:59007808 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1424 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218418831
MGI SNP Detail
Alliance Variant
Chr3:59007820 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1412 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T G T T T T T T T T T T T
rs581714962
MGI SNP Detail
Alliance Variant
Chr3:59007829 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1403 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241345537
MGI SNP Detail
Alliance Variant
Chr3:59007889 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1343 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258802054
MGI SNP Detail
Alliance Variant
Chr3:59007900 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1332 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223314152
MGI SNP Detail
Alliance Variant
Chr3:59007906 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1326 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs231866665
MGI SNP Detail
Alliance Variant
Chr3:59007925 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1307 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250465041
MGI SNP Detail
Alliance Variant
Chr3:59007961 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1271 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs218141125
MGI SNP Detail
Alliance Variant
Chr3:59007962 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1270 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242724049
MGI SNP Detail
Alliance Variant
Chr3:59008050 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1182 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs49248099
MGI SNP Detail
Alliance Variant
Chr3:59008105 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1127 bp proximal
SNP C/T T T T T T T T T T T C T T T T
rs265903064
MGI SNP Detail
Alliance Variant
Chr3:59008139 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1093 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs52060166
MGI SNP Detail
Alliance Variant
Chr3:59008220 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1012 bp proximal
SNP A/T A A A A A A A A A A T A A A
rs224833516
MGI SNP Detail
Alliance Variant
Chr3:59008226 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1006 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G A G G G A G G G G G G A G G G A G G G G G G G G
rs247569584
MGI SNP Detail
Alliance Variant
Chr3:59008227 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1005 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585870262
MGI SNP Detail
Alliance Variant
Chr3:59008289 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 943 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262673849
MGI SNP Detail
Alliance Variant
Chr3:59008308 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 924 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225006528
MGI SNP Detail
Alliance Variant
Chr3:59008312 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 920 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs49972978
MGI SNP Detail
Alliance Variant
Chr3:59008421 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 811 bp proximal
SNP G/T T T T T T T T T T T G T T T T
rs242773345
MGI SNP Detail
Alliance Variant
Chr3:59008561 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577314 within coordinates of
Rr577315 671 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253602961
MGI SNP Detail
Alliance Variant
Chr3:59008634 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577314 within coordinates of
Rr577315 598 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs223921438
MGI SNP Detail
Alliance Variant
Chr3:59008673 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577314 within coordinates of
Rr577315 559 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs247774422
MGI SNP Detail
Alliance Variant
Chr3:59008706 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577314 within coordinates of
Rr577315 526 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48675399
MGI SNP Detail
Alliance Variant
Chr3:59008720 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577314 within coordinates of
Rr577315 512 bp proximal
SNP A/C C C C C C C C C C A C C C
rs47781976
MGI SNP Detail
Alliance Variant
Chr3:59008746 Gpr171 Intron
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577314 within coordinates of
Rr577315 486 bp proximal
SNP C/T C C C C C C C C C C T C C C C
rs218493509
MGI SNP Detail
Alliance Variant
Chr3:59009056 Gpr171 mRNA-UTR
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577314 within coordinates of
Rr577315 176 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs47074574
MGI SNP Detail
Alliance Variant
Chr3:59009079 Gpr171 mRNA-UTR
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577314 within coordinates of
Rr577315 153 bp proximal
SNP C/T C C C C C C C C C C T C C C C
rs238977867
MGI SNP Detail
Alliance Variant
Chr3:59009101 Gpr171 mRNA-UTR
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577314 within coordinates of
Rr577315 131 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs257569098
MGI SNP Detail
Alliance Variant
Chr3:59009107 Gpr171 mRNA-UTR
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577314 within coordinates of
Rr577315 125 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214951620
MGI SNP Detail
Alliance Variant
Chr3:59009115 Gpr171 mRNA-UTR
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577314 within coordinates of
Rr577315 117 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A C A A A A A A A A A A C A A A C A C A C A A A C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231916094
MGI SNP Detail
Alliance Variant
Chr3:59009130 Gpr171 mRNA-UTR
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577314 within coordinates of
Rr577315 102 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250555352
MGI SNP Detail
Alliance Variant
Chr3:59009150 Gpr171 mRNA-UTR
Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577314 within coordinates of
Rr577315 82 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs218216837
MGI SNP Detail
Alliance Variant
Chr3:59009276 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C T C C C C C C C C C C T C C C T C T C T C C C T
rs50700203
MGI SNP Detail
Alliance Variant
Chr3:59009359 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 within coordinates of
SNP C/T C C C C C C C C C C T C C C C
rs236384881
MGI SNP Detail
Alliance Variant
Chr3:59009390 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T T T T T T T C T T T C T C T T T T C
rs260224327
MGI SNP Detail
Alliance Variant
Chr3:59009436 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G A G G G G G G G G G A G G G A G A A G G G A
rs225122347
MGI SNP Detail
Alliance Variant
Chr3:59009465 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A T A A A A A A A A A T A A A T T A A A
rs245091027
MGI SNP Detail
Alliance Variant
Chr3:59009479 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs387801595
MGI SNP Detail
Alliance Variant
Chr3:59009509 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 within coordinates of
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A T A A
rs265241390
MGI SNP Detail
Alliance Variant
Chr3:59009601 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T T T T T T T C T T T C C T C T T T C
rs219219660
MGI SNP Detail
Alliance Variant
Chr3:59009605 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T T T T T T T C T T T C C T C T T T C
rs50652568
MGI SNP Detail
Alliance Variant
Chr3:59009691 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 within coordinates of
SNP C/T T T T T T T T T T T C T T T T
rs47776062
MGI SNP Detail
Alliance Variant
Chr3:59009794 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 62 bp distal
SNP C/T T T T T T T T T T T C T T T T
rs253642432
MGI SNP Detail
Alliance Variant
Chr3:59009800 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 68 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs228924508
MGI SNP Detail
Alliance Variant
Chr3:59009831 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 99 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs258811630
MGI SNP Detail
Alliance Variant
Chr3:59009845 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 113 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs264222828
MGI SNP Detail
Alliance Variant
Chr3:59009895 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 163 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A G A A A A A A G A A A A A A A A A A A A
rs233507263
MGI SNP Detail
Alliance Variant
Chr3:59009957 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 225 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A G A A A A A A A A A A G A A A G A G A G A A A G
rs252569545
MGI SNP Detail
Alliance Variant
Chr3:59009958 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 226 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T T T T T T T C T T T C T C T T T T T C
rs215481218
MGI SNP Detail
Alliance Variant
Chr3:59010035 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 303 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs225995966
MGI SNP Detail
Alliance Variant
Chr3:59010045 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 313 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244420912
MGI SNP Detail
Alliance Variant
Chr3:59010129 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 397 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C T C C C C C C C C C C T C C C T C T C C C C C T
rs48161053
MGI SNP Detail
Alliance Variant
Chr3:59010142 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 410 bp distal
SNP C/G C C C C C C C C C C G C C C C
rs48298952
MGI SNP Detail
Alliance Variant
Chr3:59010171 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 439 bp distal
SNP A/G G G G G G G G G G G G G G A G
rs236475592
MGI SNP Detail
Alliance Variant
Chr3:59010173 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 441 bp distal
SNP A/C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs51717923
MGI SNP Detail
Alliance Variant
Chr3:59010234 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 502 bp distal
SNP A/G G G G G G G G G G G A G G A G
rs216653670
MGI SNP Detail
Alliance Variant
Chr3:59010248 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 516 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G T G G G G
rs239927097
MGI SNP Detail
Alliance Variant
Chr3:59010270 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 538 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs257788657
MGI SNP Detail
Alliance Variant
Chr3:59010426 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 694 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs219255384
MGI SNP Detail
Alliance Variant
Chr3:59010433 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 701 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G A G G G G G G A G G G G G G G A G G G G
rs236496750
MGI SNP Detail
Alliance Variant
Chr3:59010445 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 713 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A G A A A A A A G A A A A A A A A A A A
rs247979923
MGI SNP Detail
Alliance Variant
Chr3:59010453 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 721 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C T C C C C C C T C C C C C C C T C C C C
rs222439769
MGI SNP Detail
Alliance Variant
Chr3:59010695 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 963 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs246990513
MGI SNP Detail
Alliance Variant
Chr3:59010755 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1023 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs265618143
MGI SNP Detail
Alliance Variant
Chr3:59010765 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1033 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46201996
MGI SNP Detail
Alliance Variant
Chr3:59010793 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1061 bp distal
SNP C/T C C C C C C C C C C T C C C C
rs50215510
MGI SNP Detail
Alliance Variant
Chr3:59010837 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1105 bp distal
SNP A/C C C C C C C C C C C A C C A C
rs49642136
MGI SNP Detail
Alliance Variant
Chr3:59010869 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1137 bp distal
SNP C/T T T T T T T T T T T C T T C T
rs49782928
MGI SNP Detail
Alliance Variant
Chr3:59010886 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1154 bp distal
SNP C/G C C C C C C C C C C G C C G C
rs226035273
MGI SNP Detail
Alliance Variant
Chr3:59010920 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1188 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs244509578
MGI SNP Detail
Alliance Variant
Chr3:59010943 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1211 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs51012752
MGI SNP Detail
Alliance Variant
Chr3:59010948 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1216 bp distal
SNP A/G A A A A A A A A A A G A A G A
rs235102326
MGI SNP Detail
Alliance Variant
Chr3:59010955 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1223 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254029469
MGI SNP Detail
Alliance Variant
Chr3:59010958 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1226 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs217250959
MGI SNP Detail
Alliance Variant
Chr3:59010961 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1229 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G G G G G G
rs237884067
MGI SNP Detail
Alliance Variant
Chr3:59010977 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1245 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs262430771
MGI SNP Detail
Alliance Variant
Chr3:59010984 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1252 bp distal
Tssr29227 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs213584032
MGI SNP Detail
Alliance Variant
Chr3:59011017 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1285 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs230619668
MGI SNP Detail
Alliance Variant
Chr3:59011050 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1318 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs48606817
MGI SNP Detail
Alliance Variant
Chr3:59011104 Med12l Intron
Med12l Noncoding-Transcript-Variant
Rr577315 1372 bp distal
SNP A/G A A A A A A A A A A G A A G A
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 119

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
07/22/2025
MGI 6.24
The Jackson Laboratory

Building initial tooltip...