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Mouse SNP Summary
Symbol
Name
ID 		Rr578046
regulatory region 578046
MGI:8040178

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239653460
MGI SNP Detail
Alliance Variant		 Chr3:68515366 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1999 bp proximal
Schip1 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A G A A A A A A A A A A A A
rs256855448
MGI SNP Detail
Alliance Variant		 Chr3:68515376 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1989 bp proximal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C T C C C C C C C T C C C C
rs581011054
MGI SNP Detail
Alliance Variant		 Chr3:68515461 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1904 bp proximal
Schip1 Intron
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs585033107
MGI SNP Detail
Alliance Variant		 Chr3:68515462 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1903 bp proximal
Schip1 Intron
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs228969918
MGI SNP Detail
Alliance Variant		 Chr3:68515484 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1881 bp proximal
Schip1 Intron
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs578922652
MGI SNP Detail
Alliance Variant		 Chr3:68515490 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1875 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs253704665
MGI SNP Detail
Alliance Variant		 Chr3:68515513 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1852 bp proximal
Schip1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T C T T T T T T C T T T T T T T T T T T T
rs264809359
MGI SNP Detail
Alliance Variant		 Chr3:68515519 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1846 bp proximal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs227483414
MGI SNP Detail
Alliance Variant		 Chr3:68515547 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1818 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256146989
MGI SNP Detail
Alliance Variant		 Chr3:68515567 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1798 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs213587223
MGI SNP Detail
Alliance Variant		 Chr3:68515619 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1746 bp proximal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs234756019
MGI SNP Detail
Alliance Variant		 Chr3:68515674 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1691 bp proximal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246502287
MGI SNP Detail
Alliance Variant		 Chr3:68515713 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1652 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217482559
MGI SNP Detail
Alliance Variant		 Chr3:68515727 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1638 bp proximal
Schip1 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs242223241
MGI SNP Detail
Alliance Variant		 Chr3:68515772 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1593 bp proximal
Schip1 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs256433635
MGI SNP Detail
Alliance Variant		 Chr3:68515793 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1572 bp proximal
Schip1 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G T G T T G G G G G G G G G G G G G G G T G G G G G G G G G G
rs212485092
MGI SNP Detail
Alliance Variant		 Chr3:68515901 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1464 bp proximal
Schip1 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237231302
MGI SNP Detail
Alliance Variant		 Chr3:68515960 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1405 bp proximal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249980783
MGI SNP Detail
Alliance Variant		 Chr3:68515995 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1370 bp proximal
Schip1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs221649197
MGI SNP Detail
Alliance Variant		 Chr3:68515997 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1368 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs239588787
MGI SNP Detail
Alliance Variant		 Chr3:68516009 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1356 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253549365
MGI SNP Detail
Alliance Variant		 Chr3:68516034 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1331 bp proximal
Schip1 Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs226272967
MGI SNP Detail
Alliance Variant		 Chr3:68516041 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1324 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249772047
MGI SNP Detail
Alliance Variant		 Chr3:68516045 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1320 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261812008
MGI SNP Detail
Alliance Variant		 Chr3:68516071 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1294 bp proximal
Schip1 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs227877386
MGI SNP Detail
Alliance Variant		 Chr3:68516087 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1278 bp proximal
Schip1 Intron
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs243919094
MGI SNP Detail
Alliance Variant		 Chr3:68516102 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1263 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs257422615
MGI SNP Detail
Alliance Variant		 Chr3:68516110 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1255 bp proximal
Schip1 Intron
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs228040155
MGI SNP Detail
Alliance Variant		 Chr3:68516112 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1253 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246425312
MGI SNP Detail
Alliance Variant		 Chr3:68516121 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1244 bp proximal
Schip1 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs217414867
MGI SNP Detail
Alliance Variant		 Chr3:68516153 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 1212 bp proximal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs233154560
MGI SNP Detail
Alliance Variant		 Chr3:68516172 Gm57836 within coordinates of
Iqschfp Intron
Rr578045 within coordinates of
Rr578046 1193 bp proximal
Schip1 Intron
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs254312504
MGI SNP Detail
Alliance Variant		 Chr3:68516174 Gm57836 within coordinates of
Iqschfp Intron
Rr578045 within coordinates of
Rr578046 1191 bp proximal
Schip1 Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs212154106
MGI SNP Detail
Alliance Variant		 Chr3:68516181 Gm57836 within coordinates of
Iqschfp Intron
Rr578045 within coordinates of
Rr578046 1184 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs239183955
MGI SNP Detail
Alliance Variant		 Chr3:68516268 Gm57836 within coordinates of
Iqschfp Intron
Rr578045 within coordinates of
Rr578046 1097 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249912602
MGI SNP Detail
Alliance Variant		 Chr3:68516313 Gm57836 within coordinates of
Iqschfp Intron
Rr578045 within coordinates of
Rr578046 1052 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs216170165
MGI SNP Detail
Alliance Variant		 Chr3:68516349 Gm57836 within coordinates of
Iqschfp Intron
Rr578045 within coordinates of
Rr578046 1016 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G
rs233121820
MGI SNP Detail
Alliance Variant		 Chr3:68516360 Gm57836 within coordinates of
Iqschfp Intron
Rr578045 within coordinates of
Rr578046 1005 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G
rs253492888
MGI SNP Detail
Alliance Variant		 Chr3:68516394 Gm57836 within coordinates of
Iqschfp Intron
Rr578045 within coordinates of
Rr578046 971 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G A G G G G
rs244523409
MGI SNP Detail
Alliance Variant		 Chr3:68516455 Gm57836 within coordinates of
Iqschfp Intron
Rr578045 within coordinates of
Rr578046 910 bp proximal
Schip1 Intron
 SNP C/T C C C C C C C C T C C C C C C C C C C C C C C C C T C C C C C C C C T C C C C C C C T C C C C C C C T C C
rs246947308
MGI SNP Detail
Alliance Variant		 Chr3:68516459 Gm57836 within coordinates of
Iqschfp Intron
Rr578045 within coordinates of
Rr578046 906 bp proximal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs261284975
MGI SNP Detail
Alliance Variant		 Chr3:68516460 Gm57836 within coordinates of
Iqschfp Intron
Rr578045 within coordinates of
Rr578046 905 bp proximal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs220036380
MGI SNP Detail
Alliance Variant		 Chr3:68516523 Gm57836 within coordinates of
Iqschfp Intron
Rr578045 within coordinates of
Rr578046 842 bp proximal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs239475489
MGI SNP Detail
Alliance Variant		 Chr3:68516559 Gm57836 within coordinates of
Iqschfp Intron
Rr578045 within coordinates of
Rr578046 806 bp proximal
Schip1 Intron
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs257361400
MGI SNP Detail
Alliance Variant		 Chr3:68516569 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 796 bp proximal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs227979638
MGI SNP Detail
Alliance Variant		 Chr3:68516630 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 735 bp proximal
Schip1 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs240423741
MGI SNP Detail
Alliance Variant		 Chr3:68516649 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 716 bp proximal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs264393033
MGI SNP Detail
Alliance Variant		 Chr3:68516658 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 707 bp proximal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs234050825
MGI SNP Detail
Alliance Variant		 Chr3:68516713 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 652 bp proximal
Schip1 Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs249920858
MGI SNP Detail
Alliance Variant		 Chr3:68516734 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 631 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212319118
MGI SNP Detail
Alliance Variant		 Chr3:68516739 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 626 bp proximal
Schip1 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs231002404
MGI SNP Detail
Alliance Variant		 Chr3:68516755 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 610 bp proximal
Schip1 Intron
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs243975045
MGI SNP Detail
Alliance Variant		 Chr3:68516800 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 565 bp proximal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs216109656
MGI SNP Detail
Alliance Variant		 Chr3:68516829 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 536 bp proximal
Schip1 Intron
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T A T T T T T T A T T T T T T T T T T T T
rs233067600
MGI SNP Detail
Alliance Variant		 Chr3:68516831 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 534 bp proximal
Schip1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T C T T T T T T C T T T T T T T T T T T T
rs582676431
MGI SNP Detail
Alliance Variant		 Chr3:68516885 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 480 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs586211957
MGI SNP Detail
Alliance Variant		 Chr3:68516906 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 459 bp proximal
Schip1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T C T T T T T T T T T T T T
rs247717135
MGI SNP Detail
Alliance Variant		 Chr3:68516918 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 447 bp proximal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs578411189
MGI SNP Detail
Alliance Variant		 Chr3:68516945 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 420 bp proximal
Schip1 Intron
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T G T T T T T T T T T T T T
rs218513325
MGI SNP Detail
Alliance Variant		 Chr3:68516991 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 374 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237537450
MGI SNP Detail
Alliance Variant		 Chr3:68517138 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 227 bp proximal
Schip1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255895665
MGI SNP Detail
Alliance Variant		 Chr3:68517141 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 224 bp proximal
Schip1 Intron
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs219678819
MGI SNP Detail
Alliance Variant		 Chr3:68517158 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 207 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232433538
MGI SNP Detail
Alliance Variant		 Chr3:68517178 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 187 bp proximal
Schip1 Intron
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T T T T T T A T T T T T T A T T T T T T T A T T T T
rs250985351
MGI SNP Detail
Alliance Variant		 Chr3:68517196 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 169 bp proximal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs221599524
MGI SNP Detail
Alliance Variant		 Chr3:68517202 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 163 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs240353013
MGI SNP Detail
Alliance Variant		 Chr3:68517209 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 156 bp proximal
Schip1 Intron
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A C A A A C A A A A A A C A A A C A A A C A A A C
rs266103802
MGI SNP Detail
Alliance Variant		 Chr3:68517215 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 150 bp proximal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs225672131
MGI SNP Detail
Alliance Variant		 Chr3:68517216 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 149 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs244978061
MGI SNP Detail
Alliance Variant		 Chr3:68517236 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 129 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs261504907
MGI SNP Detail
Alliance Variant		 Chr3:68517254 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 111 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs226123992
MGI SNP Detail
Alliance Variant		 Chr3:68517258 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 107 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs243913957
MGI SNP Detail
Alliance Variant		 Chr3:68517327 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 38 bp proximal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258250654
MGI SNP Detail
Alliance Variant		 Chr3:68517330 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 35 bp proximal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs226996598
MGI SNP Detail
Alliance Variant		 Chr3:68517524 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 within coordinates of
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247661956
MGI SNP Detail
Alliance Variant		 Chr3:68517525 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 within coordinates of
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218438610
MGI SNP Detail
Alliance Variant		 Chr3:68517526 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 within coordinates of
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs235707633
MGI SNP Detail
Alliance Variant		 Chr3:68517576 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 within coordinates of
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253339165
MGI SNP Detail
Alliance Variant		 Chr3:68517586 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 within coordinates of
Schip1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs215212620
MGI SNP Detail
Alliance Variant		 Chr3:68517623 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 within coordinates of
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs232357306
MGI SNP Detail
Alliance Variant		 Chr3:68517635 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 within coordinates of
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs250921903
MGI SNP Detail
Alliance Variant		 Chr3:68517643 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 within coordinates of
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs221530048
MGI SNP Detail
Alliance Variant		 Chr3:68517700 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 3 bp distal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs582036736
MGI SNP Detail
Alliance Variant		 Chr3:68517787 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 90 bp distal
Schip1 Intron
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs585480329
MGI SNP Detail
Alliance Variant		 Chr3:68517792 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 95 bp distal
Schip1 Intron
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs386839559
MGI SNP Detail
Alliance Variant		 Chr3:68517886 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 189 bp distal
Schip1 Intron
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs387260075
MGI SNP Detail
Alliance Variant		 Chr3:68517890 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 193 bp distal
Schip1 Intron
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs233593950
MGI SNP Detail
Alliance Variant		 Chr3:68518023 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 326 bp distal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs260738514
MGI SNP Detail
Alliance Variant		 Chr3:68518028 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 331 bp distal
Schip1 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs226012892
MGI SNP Detail
Alliance Variant		 Chr3:68518045 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 348 bp distal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs242068814
MGI SNP Detail
Alliance Variant		 Chr3:68518046 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 349 bp distal
Schip1 Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs264635283
MGI SNP Detail
Alliance Variant		 Chr3:68518146 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 449 bp distal
Schip1 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220024436
MGI SNP Detail
Alliance Variant		 Chr3:68518161 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 464 bp distal
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237613399
MGI SNP Detail
Alliance Variant		 Chr3:68518179 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 482 bp distal
Schip1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T T T C T C T T T C T T T T T T C T T T C T T T C T T T C
rs258183651
MGI SNP Detail
Alliance Variant		 Chr3:68518247 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 550 bp distal
Schip1 Intron
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs226934118
MGI SNP Detail
Alliance Variant		 Chr3:68518262 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 565 bp distal
Schip1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260366933
MGI SNP Detail
Alliance Variant		 Chr3:68518276 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 579 bp distal
Schip1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs264124080
MGI SNP Detail
Alliance Variant		 Chr3:68518294 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 597 bp distal
Rr578047 within coordinates of
Schip1 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs229548782
MGI SNP Detail
Alliance Variant		 Chr3:68518326 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 629 bp distal
Rr578047 within coordinates of
Schip1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs249381191
MGI SNP Detail
Alliance Variant		 Chr3:68518361 Gm57836 within coordinates of
Iqschfp Intron
Rr578046 664 bp distal
Rr578047 within coordinates of
Schip1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 135
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory