Rr578096 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr578096
regulatory region 578096
MGI:8040228

<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 105

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.

Show only selected strains with alleles Show all selected strains
Drag columns to re-order.

Column order is reset with Filter or Show option change.

Export:

SNPs to Text File

SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs225839703 MGI SNP Detail Alliance Variant	Chr3:68841004	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1997 bp proximal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	C	G	G	G	G
rs247336168 MGI SNP Detail Alliance Variant	Chr3:68841028	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1973 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs587417438 MGI SNP Detail Alliance Variant	Chr3:68841055	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1946 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs263258961 MGI SNP Detail Alliance Variant	Chr3:68841085	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1916 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs235113021 MGI SNP Detail Alliance Variant	Chr3:68841108	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1893 bp proximal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T
rs254112425 MGI SNP Detail Alliance Variant	Chr3:68841169	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1832 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs213531541 MGI SNP Detail Alliance Variant	Chr3:68841191	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1810 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs234960572 MGI SNP Detail Alliance Variant	Chr3:68841218	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1783 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs244882942 MGI SNP Detail Alliance Variant	Chr3:68841227	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1774 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T
rs580758390 MGI SNP Detail Alliance Variant	Chr3:68841256	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1745 bp proximal	SNP	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T		T	T	T	T
rs583067907 MGI SNP Detail Alliance Variant	Chr3:68841270	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1731 bp proximal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs214034387 MGI SNP Detail Alliance Variant	Chr3:68841290	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1711 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs231111208 MGI SNP Detail Alliance Variant	Chr3:68841293	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1708 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs251623819 MGI SNP Detail Alliance Variant	Chr3:68841355	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1646 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs223919645 MGI SNP Detail Alliance Variant	Chr3:68841367	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1634 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs242730254 MGI SNP Detail Alliance Variant	Chr3:68841488	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1513 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G		A	G	G	G	G
rs260048243 MGI SNP Detail Alliance Variant	Chr3:68841515	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1486 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs220907388 MGI SNP Detail Alliance Variant	Chr3:68841567	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1434 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C	C		C	C	C		T	C	C	C	C
rs237117658 MGI SNP Detail Alliance Variant	Chr3:68841659	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1342 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs30973576 MGI SNP Detail Alliance Variant	Chr3:68841676	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1325 bp proximal	SNP	C/T		T			T	T		T		T			T													T	T			T					C	T				T		C												T
rs219577523 MGI SNP Detail Alliance Variant	Chr3:68841679	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1322 bp proximal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T
rs30973578 MGI SNP Detail Alliance Variant	Chr3:68841719	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1282 bp proximal	SNP	A/G		A			A	A		A		A			A								G					A	A			A					G	A				A		G												A
rs30973580 MGI SNP Detail Alliance Variant	Chr3:68841745	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1256 bp proximal	SNP	C/T		C			C	C		C		C			C								T					C	C			C					C	C				C		C												C
rs30973582 MGI SNP Detail Alliance Variant	Chr3:68841756	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1245 bp proximal	SNP	A/C		A			A	A		A		A			A								A					A	A			A					A	A				A		C												A
rs233941059 MGI SNP Detail Alliance Variant	Chr3:68841773	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1228 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs250330781 MGI SNP Detail Alliance Variant	Chr3:68841777	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1224 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs262053536 MGI SNP Detail Alliance Variant	Chr3:68841789	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1212 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A
rs223720160 MGI SNP Detail Alliance Variant	Chr3:68841848	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1153 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs244827007 MGI SNP Detail Alliance Variant	Chr3:68841854	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1147 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs213926117 MGI SNP Detail Alliance Variant	Chr3:68841855	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1146 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs227877887 MGI SNP Detail Alliance Variant	Chr3:68841877	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1124 bp proximal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	C	G	G	G	G
rs252706358 MGI SNP Detail Alliance Variant	Chr3:68841894	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1107 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs215719019 MGI SNP Detail Alliance Variant	Chr3:68841895	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1106 bp proximal	SNP	A/C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs240023132 MGI SNP Detail Alliance Variant	Chr3:68841908	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1093 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs30974464 MGI SNP Detail Alliance Variant	Chr3:68841949	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1052 bp proximal	SNP	A/G		G			G	G				G											A					G	G			G					G	G				G														G
rs212633814 MGI SNP Detail Alliance Variant	Chr3:68841950	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1051 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A		G	A	A	A	A	A	A	A	A	A	A	A	A
rs229799111 MGI SNP Detail Alliance Variant	Chr3:68842172	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 829 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs251862932 MGI SNP Detail Alliance Variant	Chr3:68842176	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 825 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs219473303 MGI SNP Detail Alliance Variant	Chr3:68842197	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 804 bp proximal	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs241201630 MGI SNP Detail Alliance Variant	Chr3:68842240	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 761 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs258626555 MGI SNP Detail Alliance Variant	Chr3:68842251	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 750 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs227241026 MGI SNP Detail Alliance Variant	Chr3:68842272	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 729 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs247572963 MGI SNP Detail Alliance Variant	Chr3:68842280	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 721 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs47867606 MGI SNP Detail Alliance Variant	Chr3:68842363	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 638 bp proximal	SNP	G/T				G	G																					T
rs30974466 MGI SNP Detail Alliance Variant	Chr3:68842395	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 606 bp proximal	SNP	A/G		A			A	A		A		A			A													A	A			A					G	A				A		G												A
rs30974468 MGI SNP Detail Alliance Variant	Chr3:68842401	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 600 bp proximal	SNP	C/T		T			T	T		T		T			T								C					T	T			T					T	T				T		T												T
rs30974470 MGI SNP Detail Alliance Variant	Chr3:68842427	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 574 bp proximal	SNP	A/G		G			G	G		G		G			G								G					G	G			G					A	G				G		A												G
rs238578499 MGI SNP Detail Alliance Variant	Chr3:68842432	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 569 bp proximal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	G	C	C	C	C
rs255654336 MGI SNP Detail Alliance Variant	Chr3:68842447	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 554 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs30974472 MGI SNP Detail Alliance Variant	Chr3:68842448	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 553 bp proximal	SNP	A/G		A			A	A		A		A			A								G					A	A			A					G	A				A		G												A
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs257720895 MGI SNP Detail Alliance Variant	Chr3:68842635	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 366 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T		C	T	T	T	T	T	T	T	T	T	T	T	T
rs30506541 MGI SNP Detail Alliance Variant	Chr3:68842728	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 273 bp proximal	SNP	A/G				A	G											A										G						G																		A
rs580998796 MGI SNP Detail Alliance Variant	Chr3:68842775	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 226 bp proximal	SNP	A/G	G	G			G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G		G	G		G	G	G	G	G	G	G	G	G		G	G	G	G			G	G	G	G	G	G	G
rs30975374 MGI SNP Detail Alliance Variant	Chr3:68842858	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 143 bp proximal	SNP	A/G		A			A	A		A		A			A								A					A	A			A					G	A				A		G												A
rs219834878 MGI SNP Detail Alliance Variant	Chr3:68842902	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 99 bp proximal	SNP	A/G	A	A			A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A		G	A	A	A	A
rs234569615 MGI SNP Detail Alliance Variant	Chr3:68842943	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 58 bp proximal	SNP	C/T	T	T			T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs253663118 MGI SNP Detail Alliance Variant	Chr3:68842951	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 50 bp proximal	SNP	C/T	C	C			C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C	C	C	C	T	C	C	C	C	C	T	C	C	C	C	C	C		T	C	C	C	C	C	C	C	T	C	C	C	C
rs212563060 MGI SNP Detail Alliance Variant	Chr3:68842997	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 4 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs229728669 MGI SNP Detail Alliance Variant	Chr3:68843028	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 6 bp distal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		G	T	T	T	T	T	T	T	T	T	T	T	T
rs251789255 MGI SNP Detail Alliance Variant	Chr3:68843037	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 15 bp distal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs213493064 MGI SNP Detail Alliance Variant	Chr3:68843050	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 28 bp distal Rr578097 within coordinates of	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs234690355 MGI SNP Detail Alliance Variant	Chr3:68843072	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 50 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		G	A	A	A	A	A	A	A	A	A	A	A	A
rs262886384 MGI SNP Detail Alliance Variant	Chr3:68843154	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 132 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		T	C	C	C	C	C	C	C	C	C	C	C	C
rs30975376 MGI SNP Detail Alliance Variant	Chr3:68843166	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 144 bp distal	SNP	G/T		G			G	G		G		G			G								G					G	G			G					T	G				G														G
rs250237091 MGI SNP Detail Alliance Variant	Chr3:68843368	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 346 bp distal	SNP	A/G	G	G			G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G		G		G	G	A	G	G	G	G
rs30975378 MGI SNP Detail Alliance Variant	Chr3:68843496	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 474 bp distal	SNP	A/T		T			T	T		T		A			T								T					T	T			T					T	T				T		T												T
rs256324327 MGI SNP Detail Alliance Variant	Chr3:68843545	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 523 bp distal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	G	C	C	C	C
rs30975380 MGI SNP Detail Alliance Variant	Chr3:68843559	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 537 bp distal	SNP	C/T		T			T	T		T		T			T								C					T	T			T					T	T				T		T												T
rs30975382 MGI SNP Detail Alliance Variant	Chr3:68843604	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 582 bp distal	SNP	A/C		A			A	A		A		A			A								C					A	A			A					A	A				A		A												A
rs255642014 MGI SNP Detail Alliance Variant	Chr3:68843634	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 612 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs221621357 MGI SNP Detail Alliance Variant	Chr3:68843635	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 613 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs245692824 MGI SNP Detail Alliance Variant	Chr3:68843656	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 634 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T
rs30976094 MGI SNP Detail Alliance Variant	Chr3:68843690	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 668 bp distal	SNP	A/G		G			G	G		G		G			G								A					G	G			G					G	G				G		G												G
rs233435234 MGI SNP Detail Alliance Variant	Chr3:68843759	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 737 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs30976096 MGI SNP Detail Alliance Variant	Chr3:68843761	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 739 bp distal	SNP	C/T		T			T	T		T		T			T								C					T	T			T					C	T				T		C												T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs256423774 MGI SNP Detail Alliance Variant	Chr3:68843789	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 767 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs223921056 MGI SNP Detail Alliance Variant	Chr3:68843808	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 786 bp distal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T
rs6246859 MGI SNP Detail Alliance Variant	Chr3:68843954	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 932 bp distal	SNP	A/T																T								A
rs213481292 MGI SNP Detail Alliance Variant	Chr3:68844001	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 979 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		T	C	C	C	C	C	C	C	C	C	C	C	C
rs240832807 MGI SNP Detail Alliance Variant	Chr3:68844046	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1024 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs252181812 MGI SNP Detail Alliance Variant	Chr3:68844048	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1026 bp distal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs218962079 MGI SNP Detail Alliance Variant	Chr3:68844093	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1071 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C		T	C	C	C	C	C	C	C	C	C	C	C	C
rs239417156 MGI SNP Detail Alliance Variant	Chr3:68844096	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1074 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	G	G	A	A	A	A	G	A	G	A	A	A	G	A	A	A	A	A	A		G	A	A	A	G	A	G	A	G	A	A	A	G
rs248905151 MGI SNP Detail Alliance Variant	Chr3:68844144	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1122 bp distal	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs218021515 MGI SNP Detail Alliance Variant	Chr3:68844208	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1186 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T	T	T	T	C	T	T	T	T	T	C	T	T	T	T	T	T		C	T	T	T	T	T	T	T	C	T	T	T	T
rs232240979 MGI SNP Detail Alliance Variant	Chr3:68844217	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1195 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs249856642 MGI SNP Detail Alliance Variant	Chr3:68844223	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1201 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G	G	G	G	A	G	G	G	G	G	A	G	G	G	G	G	G		A	G	G	G	G	G	G	G	A	G	G	G	G
rs30976098 MGI SNP Detail Alliance Variant	Chr3:68844226	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1204 bp distal	SNP	A/C		C			C			C		C											A						C								A							A
rs30976100 MGI SNP Detail Alliance Variant	Chr3:68844236	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1214 bp distal	SNP	A/G		A			A	A		A		A			A								G					A	A			A						A				A		G												A
rs248031338 MGI SNP Detail Alliance Variant	Chr3:68844270	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1248 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C	C	C	C	T	C	C	C	C	C	T	C	C	C	C	C	C		T	C	C	C	C	C	C	C	T	C	C	C	C
rs264546133 MGI SNP Detail Alliance Variant	Chr3:68844303	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1281 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	A	G	G	G	G
rs226519518 MGI SNP Detail Alliance Variant	Chr3:68844351	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1329 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs242563780 MGI SNP Detail Alliance Variant	Chr3:68844474	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1452 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs256412641 MGI SNP Detail Alliance Variant	Chr3:68844514	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1492 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	G	G	A	A	A	A	G	A	G	A	A	A	A	A	A	A	A	A	A		G	A	A	A	G	A	G	A	G	A	A	A	G
rs223912050 MGI SNP Detail Alliance Variant	Chr3:68844569	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1547 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs245462608 MGI SNP Detail Alliance Variant	Chr3:68844656	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1634 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs257308037 MGI SNP Detail Alliance Variant	Chr3:68844660	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1638 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs232142933 MGI SNP Detail Alliance Variant	Chr3:68844675	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1653 bp distal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs256978851 MGI SNP Detail Alliance Variant	Chr3:68844703	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1681 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A	A	A	A	G	A	A	A	A	A	G	A	A	A	A	A	A		G	A	A	A	A	A	A	A	G	A	A	A	A
rs218946157 MGI SNP Detail Alliance Variant	Chr3:68844827	Ift80 Intron Ift80 Noncoding-Transcript-Variant Rr578096 1805 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T

<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 105

Filter

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 03/25/2025 MGI 6.24