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Mouse SNP Summary
Symbol
Name
ID
Rr578549
regulatory region 578549
MGI:8040681

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258512308
MGI SNP Detail
Alliance Variant
Chr3:79472999 Fnip2 Intron
Rr578549 1980 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs218260056
MGI SNP Detail
Alliance Variant
Chr3:79473047 Fnip2 Intron
Rr578549 1932 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235302680
MGI SNP Detail
Alliance Variant
Chr3:79473050 Fnip2 Intron
Rr578549 1929 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242393236
MGI SNP Detail
Alliance Variant
Chr3:79473065 Fnip2 Intron
Rr578549 1914 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs212925136
MGI SNP Detail
Alliance Variant
Chr3:79473103 Fnip2 Intron
Rr578549 1876 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230716780
MGI SNP Detail
Alliance Variant
Chr3:79473189 Fnip2 Intron
Rr578549 1790 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31239530
MGI SNP Detail
Alliance Variant
Chr3:79473227 Fnip2 Intron
Rr578549 1752 bp proximal
SNP A/C C C C C C C A C C C C C C C C
rs223027796
MGI SNP Detail
Alliance Variant
Chr3:79473228 Fnip2 Intron
Rr578549 1751 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31239532
MGI SNP Detail
Alliance Variant
Chr3:79473235 Fnip2 Intron
Rr578549 1744 bp proximal
SNP C/G C C C C C C C C C C G C C G C
rs237736501
MGI SNP Detail
Alliance Variant
Chr3:79473260 Fnip2 Intron
Rr578549 1719 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs263243239
MGI SNP Detail
Alliance Variant
Chr3:79473399 Fnip2 Intron
Rr578549 1580 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225533165
MGI SNP Detail
Alliance Variant
Chr3:79473439 Fnip2 Intron
Rr578549 1540 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs242515659
MGI SNP Detail
Alliance Variant
Chr3:79473491 Fnip2 Intron
Rr578549 1488 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs255738375
MGI SNP Detail
Alliance Variant
Chr3:79473595 Fnip2 Intron
Rr578549 1384 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs218553728
MGI SNP Detail
Alliance Variant
Chr3:79473612 Fnip2 Intron
Rr578549 1367 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs239311058
MGI SNP Detail
Alliance Variant
Chr3:79473664 Fnip2 Intron
Rr578549 1315 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs262954138
MGI SNP Detail
Alliance Variant
Chr3:79473910 Fnip2 Intron
Rr578548 within coordinates of
Rr578549 1069 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs31240584
MGI SNP Detail
Alliance Variant
Chr3:79473966 Fnip2 Intron
Rr578548 within coordinates of
Rr578549 1013 bp proximal
SNP A/G A A A A A A A A A A G A A
rs253420226
MGI SNP Detail
Alliance Variant
Chr3:79474165 Fnip2 Intron
Rr578548 within coordinates of
Rr578549 814 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265984559
MGI SNP Detail
Alliance Variant
Chr3:79474195 Fnip2 Intron
Rr578548 within coordinates of
Rr578549 784 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs229393660
MGI SNP Detail
Alliance Variant
Chr3:79474429 Cpgi13275 within coordinates of
Fnip2 Intron
Rr578548 within coordinates of
Rr578549 550 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs242450103
MGI SNP Detail
Alliance Variant
Chr3:79474476 Cpgi13275 within coordinates of
Fnip2 Intron
Rr578548 within coordinates of
Rr578549 503 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212991441
MGI SNP Detail
Alliance Variant
Chr3:79474502 Cpgi13275 within coordinates of
Fnip2 Intron
Rr578548 within coordinates of
Rr578549 477 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A G A A A A A A G A A A A A A G A A A A
rs231469107
MGI SNP Detail
Alliance Variant
Chr3:79474534 Cpgi13275 within coordinates of
Fnip2 Intron
Rr578548 within coordinates of
Rr578549 445 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs255262151
MGI SNP Detail
Alliance Variant
Chr3:79474558 Cpgi13275 within coordinates of
Fnip2 Intron
Rr578548 within coordinates of
Rr578549 421 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214726996
MGI SNP Detail
Alliance Variant
Chr3:79474566 Cpgi13275 within coordinates of
Fnip2 Intron
Rr578548 within coordinates of
Rr578549 413 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239877160
MGI SNP Detail
Alliance Variant
Chr3:79474576 Cpgi13275 within coordinates of
Fnip2 Intron
Rr578548 within coordinates of
Rr578549 403 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C T C C C C
rs259327631
MGI SNP Detail
Alliance Variant
Chr3:79474595 Cpgi13275 within coordinates of
Fnip2 Intron
Rr578548 within coordinates of
Rr578549 384 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs226003080
MGI SNP Detail
Alliance Variant
Chr3:79474622 Cpgi13275 within coordinates of
Fnip2 Intron
Rr578548 within coordinates of
Rr578549 357 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C A C C C
rs236177679
MGI SNP Detail
Alliance Variant
Chr3:79474623 Cpgi13275 within coordinates of
Fnip2 Intron
Rr578548 within coordinates of
Rr578549 356 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G C G G G
rs249361525
MGI SNP Detail
Alliance Variant
Chr3:79474674 Cpgi13275 within coordinates of
Fnip2 Intron
Rr578548 within coordinates of
Rr578549 305 bp proximal
Tssr33723 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218601353
MGI SNP Detail
Alliance Variant
Chr3:79474694 Cpgi13275 within coordinates of
Fnip2 Intron
Rr578548 within coordinates of
Rr578549 285 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs238521827
MGI SNP Detail
Alliance Variant
Chr3:79474714 Cpgi13275 within coordinates of
Fnip2 Intron
Rr578548 within coordinates of
Rr578549 265 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262686180
MGI SNP Detail
Alliance Variant
Chr3:79474718 Cpgi13275 within coordinates of
Fnip2 Intron
Rr578548 within coordinates of
Rr578549 261 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs224566374
MGI SNP Detail
Alliance Variant
Chr3:79474787 Cpgi13275 within coordinates of
Fnip2 Intron
Rr578548 within coordinates of
Rr578549 192 bp proximal
SNP A/C C C A A A A A A A A A A A A A A A A C A A A A A A A A A A C A A A A A A A A A A A A A A A A C A A C A
rs249557968
MGI SNP Detail
Alliance Variant
Chr3:79474800 Cpgi13275 within coordinates of
Fnip2 Intron
Rr578548 within coordinates of
Rr578549 179 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs264170217
MGI SNP Detail
Alliance Variant
Chr3:79474896 Cpgi13275 within coordinates of
Fnip2 Coding-Synonymous
Rr578548 within coordinates of
Rr578549 83 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579305599
MGI SNP Detail
Alliance Variant
Chr3:79474939 Cpgi13275 within coordinates of
Fnip2 mRNA-UTR
Rr578548 within coordinates of
Rr578549 40 bp proximal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs229452738
MGI SNP Detail
Alliance Variant
Chr3:79475100 Cpgi13275 within coordinates of
Fnip2 mRNA-UTR
Rr578549 within coordinates of
SNP A/G A G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G
rs236079633
MGI SNP Detail
Alliance Variant
Chr3:79475148 Cpgi13275 within coordinates of
Fnip2 mRNA-UTR
Rr578549 within coordinates of
Tssr33727 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254763636
MGI SNP Detail
Alliance Variant
Chr3:79475240 Cpgi13275 within coordinates of
Fnip2 mRNA-UTR
Rr578549 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs225426902
MGI SNP Detail
Alliance Variant
Chr3:79475270 Cpgi13275 within coordinates of
Fnip2 mRNA-UTR
Rr578549 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251586696
MGI SNP Detail
Alliance Variant
Chr3:79475276 Cpgi13275 within coordinates of
Fnip2 mRNA-UTR
Rr578549 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216202098
MGI SNP Detail
Alliance Variant
Chr3:79475286 Cpgi13275 within coordinates of
Fnip2 mRNA-UTR
Rr578549 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A G A A A A A A G A A A A A A G A A A A
rs582759345
MGI SNP Detail
Alliance Variant
Chr3:79475288 Cpgi13275 within coordinates of
Fnip2 mRNA-UTR
Rr578549 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs231640596
MGI SNP Detail
Alliance Variant
Chr3:79475301 Cpgi13275 within coordinates of
Fnip2 mRNA-UTR
Rr578549 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C A C C C C C C A C C C C C C C C C C C
rs258184285
MGI SNP Detail
Alliance Variant
Chr3:79475382 Cpgi13275 within coordinates of
Fnip2 mRNA-UTR
Rr578549 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G
rs216597545
MGI SNP Detail
Alliance Variant
Chr3:79475406 Cpgi13275 within coordinates of
Fnip2 mRNA-UTR
Rr578549 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C G C C C C C C G C C C C C C C C C C C
rs585208016
MGI SNP Detail
Alliance Variant
Chr3:79475428 Cpgi13275 within coordinates of
Fnip2 mRNA-UTR
Rr578549 within coordinates of
Tssr33728 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs236243380
MGI SNP Detail
Alliance Variant
Chr3:79475431 Cpgi13275 within coordinates of
Fnip2 mRNA-UTR
Rr578549 within coordinates of
Tssr33728 within coordinates of
SNP A/C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G C G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249418491
MGI SNP Detail
Alliance Variant
Chr3:79475441 Cpgi13275 within coordinates of
Fnip2 mRNA-UTR
Rr578549 within coordinates of
Tssr33728 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs52329758
MGI SNP Detail
Chr3:79475465 Cpgi13275 within coordinates of
Rr578549 within coordinates of
SNP C C C
rs237717641
MGI SNP Detail
Chr3:79475472 Cpgi13275 within coordinates of
Rr578549 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs257548902
MGI SNP Detail
Chr3:79475474 Cpgi13275 within coordinates of
Rr578549 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A G A A A A A G A A A
rs223722201
MGI SNP Detail
Chr3:79475569 4930589L23Rik within coordinates of
Cpgi13275 within coordinates of
Rr578549 85 bp distal
Rr578550 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs246909177
MGI SNP Detail
Chr3:79475591 4930589L23Rik within coordinates of
Rr578549 107 bp distal
Rr578550 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs263968329
MGI SNP Detail
Chr3:79475606 4930589L23Rik within coordinates of
Rr578549 122 bp distal
Rr578550 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223022822
MGI SNP Detail
Chr3:79475615 4930589L23Rik within coordinates of
Rr578549 131 bp distal
Rr578550 within coordinates of
Tssr29585 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236140109
MGI SNP Detail
Chr3:79475636 4930589L23Rik within coordinates of
Rr578549 152 bp distal
Rr578550 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs254816070
MGI SNP Detail
Chr3:79475651 4930589L23Rik within coordinates of
Rr578549 167 bp distal
Rr578550 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs225494497
MGI SNP Detail
Chr3:79475766 4930589L23Rik within coordinates of
Rr578549 282 bp distal
Rr578550 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs247027907
MGI SNP Detail
Chr3:79475807 4930589L23Rik within coordinates of
Rr578549 323 bp distal
Rr578550 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263227737
MGI SNP Detail
Chr3:79475817 4930589L23Rik within coordinates of
Rr578549 333 bp distal
Rr578550 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233165520
MGI SNP Detail
Chr3:79475823 4930589L23Rik within coordinates of
Rr578549 339 bp distal
Rr578550 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs30857436
MGI SNP Detail
Chr3:79475835 4930589L23Rik within coordinates of
Rr578549 351 bp distal
Rr578550 within coordinates of
SNP A/T T A
rs579528126
MGI SNP Detail
Chr3:79475913 4930589L23Rik within coordinates of
Rr578549 429 bp distal
Rr578550 within coordinates of
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs583292615
MGI SNP Detail
Chr3:79475914 4930589L23Rik within coordinates of
Rr578549 430 bp distal
Rr578550 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs52180261
MGI SNP Detail
Chr3:79475915 4930589L23Rik within coordinates of
Rr578549 431 bp distal
Rr578550 within coordinates of
SNP G/T T G
rs229153700
MGI SNP Detail
Chr3:79475922 4930589L23Rik within coordinates of
Rr578549 438 bp distal
Rr578550 within coordinates of
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs585709662
MGI SNP Detail
Chr3:79475925 4930589L23Rik within coordinates of
Rr578549 441 bp distal
Rr578550 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G T G G G G G G T G G G G G T G G G G G G G G G G G G G G G G G
rs243415314
MGI SNP Detail
Chr3:79476001 4930589L23Rik within coordinates of
Rr578549 517 bp distal
Rr578550 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs212703136
MGI SNP Detail
Chr3:79476023 4930589L23Rik within coordinates of
Rr578549 539 bp distal
Rr578550 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235982781
MGI SNP Detail
Chr3:79476189 4930589L23Rik within coordinates of
Rr578549 705 bp distal
Rr578550 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs262309715
MGI SNP Detail
Chr3:79476191 4930589L23Rik within coordinates of
Rr578549 707 bp distal
Rr578550 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215333920
MGI SNP Detail
Chr3:79476243 4930589L23Rik within coordinates of
Rr578549 759 bp distal
Rr578550 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240558732
MGI SNP Detail
Chr3:79476272 4930589L23Rik within coordinates of
Rr578549 788 bp distal
Rr578550 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs252911274
MGI SNP Detail
Chr3:79476274 4930589L23Rik within coordinates of
Rr578549 790 bp distal
Rr578550 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs223086011
MGI SNP Detail
Chr3:79476280 4930589L23Rik within coordinates of
Rr578549 796 bp distal
Rr578550 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230299050
MGI SNP Detail
Chr3:79476362 4930589L23Rik within coordinates of
Rr578549 878 bp distal
Rr578550 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs249175144
MGI SNP Detail
Chr3:79476395 4930589L23Rik within coordinates of
Rr578549 911 bp distal
Rr578550 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A
rs222436147
MGI SNP Detail
Chr3:79476418 4930589L23Rik within coordinates of
Rr578549 934 bp distal
Rr578550 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs244364749
MGI SNP Detail
Chr3:79476436 4930589L23Rik within coordinates of
Rr578549 952 bp distal
Rr578550 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265545871
MGI SNP Detail
Chr3:79476438 4930589L23Rik within coordinates of
Rr578549 954 bp distal
Rr578550 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs225085988
MGI SNP Detail
Chr3:79476445 4930589L23Rik within coordinates of
Rr578549 961 bp distal
Rr578550 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G A G G A G
rs250246929
MGI SNP Detail
Chr3:79476497 4930589L23Rik within coordinates of
Rr578549 1013 bp distal
Rr578550 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs261290880
MGI SNP Detail
Chr3:79476505 4930589L23Rik within coordinates of
Rr578549 1021 bp distal
Rr578550 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs229210768
MGI SNP Detail
Chr3:79476516 4930589L23Rik within coordinates of
Rr578549 1032 bp distal
Rr578550 within coordinates of
Rr578551 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs52275101
MGI SNP Detail
Chr3:79476579 4930589L23Rik within coordinates of
Rr578549 1095 bp distal
Rr578550 within coordinates of
SNP A/G A G
rs580318881
MGI SNP Detail
Chr3:79476587 4930589L23Rik within coordinates of
Rr578549 1103 bp distal
Rr578550 within coordinates of
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs52099174
MGI SNP Detail
Chr3:79476612 4930589L23Rik within coordinates of
Rr578549 1128 bp distal
SNP C/G G C
rs52401195
MGI SNP Detail
Chr3:79476614 4930589L23Rik within coordinates of
Rr578549 1130 bp distal
SNP C/G G C
rs243469335
MGI SNP Detail
Chr3:79476674 4930589L23Rik within coordinates of
Rr578549 1190 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs256684488
MGI SNP Detail
Chr3:79476716 4930589L23Rik within coordinates of
Rr578549 1232 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs230036652
MGI SNP Detail
Chr3:79476725 4930589L23Rik within coordinates of
Rr578549 1241 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs251327991
MGI SNP Detail
Chr3:79476727 4930589L23Rik within coordinates of
Rr578549 1243 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs215888753
MGI SNP Detail
Chr3:79476834 4930589L23Rik within coordinates of
Rr578549 1350 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs238403519
MGI SNP Detail
Chr3:79476885 4930589L23Rik within coordinates of
Rr578549 1401 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs246411291
MGI SNP Detail
Chr3:79476939 4930589L23Rik within coordinates of
Rr578549 1455 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217061024
MGI SNP Detail
Chr3:79477089 4930589L23Rik within coordinates of
Rr578549 1605 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230350166
MGI SNP Detail
Chr3:79477115 4930589L23Rik within coordinates of
Rr578549 1631 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
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Showing SNP(s) 1 - 100 of 110

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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