About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Rr578683
regulatory region 578683
MGI:8040815

<< first < prev1 next > last >>
Showing SNP(s) 1 - 85 of 85

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255809924
MGI SNP Detail		 Chr3:80941781 Rr375235 within coordinates of
Rr578681 within coordinates of
Rr578683 1953 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G A A G G G A A G G G G G A G A G A G G A G G G A G G G A G G A A
rs215167914
MGI SNP Detail		 Chr3:80941852 Rr375235 within coordinates of
Rr578681 within coordinates of
Rr578683 1882 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C T T C C C T T C C C C C T C T C T C C T C C C T C C C T C C T T
rs228104818
MGI SNP Detail		 Chr3:80941986 Rr375235 within coordinates of
Rr578681 within coordinates of
Rr578683 1748 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs247956452
MGI SNP Detail		 Chr3:80941989 Rr375235 within coordinates of
Rr578681 within coordinates of
Rr578683 1745 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs217324106
MGI SNP Detail		 Chr3:80942197 Rr375235 within coordinates of
Rr578683 1537 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs229786086
MGI SNP Detail		 Chr3:80942269 Rr375235 within coordinates of
Rr578683 1465 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs255680854
MGI SNP Detail		 Chr3:80942336 Rr375235 within coordinates of
Rr578683 1398 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs213412956
MGI SNP Detail		 Chr3:80942348 Rr375235 within coordinates of
Rr578683 1386 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs236285848
MGI SNP Detail		 Chr3:80942399 Rr375235 within coordinates of
Rr578683 1335 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs262512780
MGI SNP Detail		 Chr3:80942433 Rr375235 within coordinates of
Rr578683 1301 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs220821057
MGI SNP Detail		 Chr3:80942451 Rr375235 within coordinates of
Rr578683 1283 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs240440040
MGI SNP Detail		 Chr3:80942476 Rr375235 within coordinates of
Rr578683 1258 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252872236
MGI SNP Detail		 Chr3:80942516 Rr375235 within coordinates of
Rr578683 1218 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs223001889
MGI SNP Detail		 Chr3:80942519 Rr375235 within coordinates of
Rr578683 1215 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244334183
MGI SNP Detail		 Chr3:80942534 Rr375235 within coordinates of
Rr578683 1200 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261831939
MGI SNP Detail		 Chr3:80942535 Rr375235 within coordinates of
Rr578683 1199 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs221789857
MGI SNP Detail		 Chr3:80942546 Rr375235 within coordinates of
Rr578683 1188 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C C T C C C C C C C C C C C C
rs243847925
MGI SNP Detail		 Chr3:80942552 Rr375235 within coordinates of
Rr578683 1182 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs258808874
MGI SNP Detail		 Chr3:80942576 Rr375235 within coordinates of
Rr578683 1158 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs227806283
MGI SNP Detail		 Chr3:80942580 Rr375235 within coordinates of
Rr578683 1154 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs247994638
MGI SNP Detail		 Chr3:80942618 Gm16000 within coordinates of
Rr375235 within coordinates of
Rr578683 1116 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs261227454
MGI SNP Detail		 Chr3:80942646 Gm16000 within coordinates of
Rr375235 within coordinates of
Rr578683 1088 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227510755
MGI SNP Detail		 Chr3:80942657 Gm16000 within coordinates of
Rr375235 within coordinates of
Rr578683 1077 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253934131
MGI SNP Detail		 Chr3:80942769 Gm16000 within coordinates of
Rr375235 within coordinates of
Rr578683 965 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213607601
MGI SNP Detail		 Chr3:80942799 Gm16000 within coordinates of
Rr375235 within coordinates of
Rr578683 935 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238361965
MGI SNP Detail		 Chr3:80942801 Gm16000 within coordinates of
Rr375235 within coordinates of
Rr578683 933 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs251665838
MGI SNP Detail		 Chr3:80942815 Gm16000 within coordinates of
Rr375235 within coordinates of
Rr578683 919 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs215296012
MGI SNP Detail		 Chr3:80942851 Gm16000 within coordinates of
Rr375235 within coordinates of
Rr578683 883 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233610093
MGI SNP Detail		 Chr3:80942855 Gm16000 within coordinates of
Rr375235 within coordinates of
Rr578683 879 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252900637
MGI SNP Detail		 Chr3:80942889 Gm16000 within coordinates of
Rr375235 within coordinates of
Rr578683 845 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs223041058
MGI SNP Detail		 Chr3:80942892 Gm16000 within coordinates of
Rr375235 within coordinates of
Rr578683 842 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs234963638
MGI SNP Detail		 Chr3:80942905 Gm16000 within coordinates of
Rr375235 within coordinates of
Rr578683 829 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs261738026
MGI SNP Detail		 Chr3:80942959 Gm16000 within coordinates of
Rr375235 within coordinates of
Rr578683 775 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs584833034
MGI SNP Detail		 Chr3:80942974 Gm16000 within coordinates of
Rr578683 760 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs222814070
MGI SNP Detail		 Chr3:80943050 Gm16000 within coordinates of
Rr578683 684 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C T C
rs246644202
MGI SNP Detail		 Chr3:80943063 Gm16000 within coordinates of
Rr578683 671 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258847845
MGI SNP Detail		 Chr3:80943071 Gm16000 within coordinates of
Rr578683 663 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs221503321
MGI SNP Detail		 Chr3:80943121 Gm16000 within coordinates of
Rr578683 613 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs241658835
MGI SNP Detail		 Chr3:80943151 Gm16000 within coordinates of
Rr578683 583 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs261257995
MGI SNP Detail		 Chr3:80943191 Gm16000 within coordinates of
Rr578683 543 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228194949
MGI SNP Detail		 Chr3:80943292 Gm16000 within coordinates of
Rr578682 within coordinates of
Rr578683 442 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249869406
MGI SNP Detail		 Chr3:80943293 Gm16000 within coordinates of
Rr578682 within coordinates of
Rr578683 441 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265046413
MGI SNP Detail		 Chr3:80943313 Gm16000 within coordinates of
Rr578682 within coordinates of
Rr578683 421 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A G G A A A A A G A G A G A A G A A A G A A A G A A G
rs230769417
MGI SNP Detail		 Chr3:80943335 Gm16000 within coordinates of
Rr578682 within coordinates of
Rr578683 399 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs244726807
MGI SNP Detail		 Chr3:80943375 Gm16000 within coordinates of
Rr578682 within coordinates of
Rr578683 359 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs215333332
MGI SNP Detail		 Chr3:80943385 Gm16000 within coordinates of
Rr578682 within coordinates of
Rr578683 349 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs233645602
MGI SNP Detail		 Chr3:80943475 Gm16000 within coordinates of
Rr578682 within coordinates of
Rr578683 259 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs246733856
MGI SNP Detail		 Chr3:80943546 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Rr578682 within coordinates of
Rr578683 188 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs219276872
MGI SNP Detail		 Chr3:80943587 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Rr578682 within coordinates of
Rr578683 147 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G
rs236779199
MGI SNP Detail		 Chr3:80943602 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Rr578682 within coordinates of
Rr578683 132 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256651386
MGI SNP Detail		 Chr3:80943703 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Rr578682 within coordinates of
Rr578683 31 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs579040146
MGI SNP Detail
Alliance Variant		 Chr3:80943867 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Pdgfc mRNA-UTR
Rr578683 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C T C C T C C C C C C C T C C C C C C C C
rs222504111
MGI SNP Detail
Alliance Variant		 Chr3:80943888 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Pdgfc mRNA-UTR
Rr578683 within coordinates of
 SNP A/C A A A A A A A A A A A A C A C C A A C A A A A C C A C A A C A A C A C
rs237241835
MGI SNP Detail
Alliance Variant		 Chr3:80943982 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Pdgfc mRNA-UTR
Rr578683 within coordinates of
Tssr29618 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C G C G C C C C C C C C C C C C C C
rs252594134
MGI SNP Detail
Alliance Variant		 Chr3:80943987 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Pdgfc mRNA-UTR
Rr578683 within coordinates of
Tssr29618 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs221544465
MGI SNP Detail
Alliance Variant		 Chr3:80944001 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Pdgfc mRNA-UTR
Rr578683 within coordinates of
Tssr29618 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T G G T T T T G T G T G T T G T T T T T T T G T T T
rs241785851
MGI SNP Detail
Alliance Variant		 Chr3:80944004 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Pdgfc mRNA-UTR
Rr578683 within coordinates of
Tssr29618 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs254977049
MGI SNP Detail
Alliance Variant		 Chr3:80944153 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Pdgfc mRNA-UTR
Rr578683 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219877195
MGI SNP Detail
Alliance Variant		 Chr3:80944157 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Pdgfc mRNA-UTR
Rr578683 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs245037926
MGI SNP Detail
Alliance Variant		 Chr3:80944854 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Pdgfc Coding-Synonymous
Pdgfc mRNA-UTR
Rr578683 438 bp distal
Rr578687 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A G A A A A
rs262338678
MGI SNP Detail
Alliance Variant		 Chr3:80944898 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Pdgfc Intron
Rr578683 482 bp distal
Rr578687 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs231050193
MGI SNP Detail
Alliance Variant		 Chr3:80944946 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Pdgfc Intron
Rr578683 530 bp distal
Rr578687 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T C C T T T T C T C T C T T C T T T C T T C T T C C
rs239055741
MGI SNP Detail
Alliance Variant		 Chr3:80944954 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Pdgfc Intron
Rr578683 538 bp distal
Rr578687 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs31663515
MGI SNP Detail
Alliance Variant		 Chr3:80945033 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 617 bp distal
Rr578688 within coordinates of
 SNP C/G G G G C G G C
rs227769372
MGI SNP Detail
Alliance Variant		 Chr3:80945072 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 656 bp distal
Rr578688 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs246851866
MGI SNP Detail
Alliance Variant		 Chr3:80945081 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 665 bp distal
Rr578688 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs219227305
MGI SNP Detail
Alliance Variant		 Chr3:80945082 Cpgi13283 within coordinates of
Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 666 bp distal
Rr578688 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs227686001
MGI SNP Detail
Alliance Variant		 Chr3:80945292 Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 876 bp distal
Rr578688 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs254713320
MGI SNP Detail
Alliance Variant		 Chr3:80945302 Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 886 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214205738
MGI SNP Detail
Alliance Variant		 Chr3:80945379 Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 963 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs233213946
MGI SNP Detail
Alliance Variant		 Chr3:80945434 Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 1018 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A G A A A G A A G A
rs253170276
MGI SNP Detail
Alliance Variant		 Chr3:80945449 Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 1033 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C T C
rs216175123
MGI SNP Detail
Alliance Variant		 Chr3:80945450 Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 1034 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs52002617
MGI SNP Detail
Alliance Variant		 Chr3:80945454 Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 1038 bp distal
 SNP A/C A A C
rs47045715
MGI SNP Detail
Alliance Variant		 Chr3:80945588 Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 1172 bp distal
 SNP A/C C C C A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219720874
MGI SNP Detail
Alliance Variant		 Chr3:80945612 Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 1196 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30757151
MGI SNP Detail
Alliance Variant		 Chr3:80945825 Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 1409 bp distal
 SNP G/T G G T G G G T
rs262004350
MGI SNP Detail
Alliance Variant		 Chr3:80945848 Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 1432 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223312223
MGI SNP Detail
Alliance Variant		 Chr3:80945964 Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 1548 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C C C C C C G C C C C C C G C C C G C C C G C C C
rs239197119
MGI SNP Detail
Alliance Variant		 Chr3:80945979 Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 1563 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A
rs30559521
MGI SNP Detail
Alliance Variant		 Chr3:80946022 Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 1606 bp distal
 SNP A/G A A G A
rs582581925
MGI SNP Detail
Alliance Variant		 Chr3:80946040 Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 1624 bp distal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs258013437
MGI SNP Detail
Alliance Variant		 Chr3:80946362 Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 1946 bp distal
Rr578689 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C T T C C C C C T C T C T C C T C C C T C C C T C C T T
rs228221413
MGI SNP Detail
Alliance Variant		 Chr3:80946379 Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 1963 bp distal
Rr578689 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G A G
rs241010747
MGI SNP Detail
Alliance Variant		 Chr3:80946380 Gm16000 within coordinates of
Gm64611 within coordinates of
Pdgfc Intron
Rr578683 1964 bp distal
Rr578689 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
<< first < prev1 next > last >>
Showing SNP(s) 1 - 85 of 85
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory