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Mouse SNP Summary
Symbol
Name
ID
Rr579488
regulatory region 579488
MGI:8041620

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Showing SNP(s) 1 - 65 of 65

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31083201
MGI SNP Detail
Chr3:87340774 Rr579488 1993 bp proximal
SNP A/G A A G A A A
rs220910446
MGI SNP Detail
Chr3:87340984 Rr579488 1783 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs238568433
MGI SNP Detail
Chr3:87341003 Rr579488 1764 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30355696
MGI SNP Detail
Chr3:87341136 Rr579488 1631 bp proximal
SNP C/T T T T T T T T C T T C T T C C T C T T
rs218933332
MGI SNP Detail
Chr3:87341311 Rr579488 1456 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241621679
MGI SNP Detail
Chr3:87341469 Rr579488 1298 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs266239157
MGI SNP Detail
Chr3:87341477 Rr579488 1290 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31284391
MGI SNP Detail
Chr3:87341595 Rr579488 1172 bp proximal
SNP A/G G G G G G G G A G G G G G A G G A G G
rs248519081
MGI SNP Detail
Chr3:87341597 Rr579488 1170 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263018584
MGI SNP Detail
Chr3:87341639 Rr579488 1128 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226305852
MGI SNP Detail
Chr3:87341706 Rr579488 1061 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244806892
MGI SNP Detail
Chr3:87341808 Rr579488 959 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212710882
MGI SNP Detail
Chr3:87341881 Rr579488 886 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31243149
MGI SNP Detail
Chr3:87342010 Rr579488 757 bp proximal
SNP C/T C C T C C C
rs254619575
MGI SNP Detail
Chr3:87342070 Rr579488 697 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs218077064
MGI SNP Detail
Chr3:87342180 Rr579488 587 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs238697162
MGI SNP Detail
Chr3:87342281 Rr579488 486 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs263375551
MGI SNP Detail
Chr3:87342536 Rr579488 231 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs215265549
MGI SNP Detail
Chr3:87342577 Rr579488 190 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31312021
MGI SNP Detail
Chr3:87342766 Rr579488 1 bp proximal
SNP C/T C C C C C C C T C C C C C T C C T C C
rs249893454
MGI SNP Detail
Chr3:87342826 Rr579488 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218853647
MGI SNP Detail
Chr3:87342847 Rr579488 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31000402
MGI SNP Detail
Chr3:87342901 Rr579488 within coordinates of
SNP C/T T T T T T T T C T T C T T C C T C T T
rs586465784
MGI SNP Detail
Chr3:87342908 Rr397756 within coordinates of
Rr579488 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs261137311
MGI SNP Detail
Chr3:87342949 Rr397756 within coordinates of
Rr579488 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs226587458
MGI SNP Detail
Chr3:87342954 Rr397756 within coordinates of
Rr579488 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs30943803
MGI SNP Detail
Chr3:87343030 Rr397756 within coordinates of
Rr579488 within coordinates of
SNP C/T T T T T T C T C T T C C T
rs50877931
MGI SNP Detail
Chr3:87343055 Rr397756 within coordinates of
Rr579488 within coordinates of
SNP C/T T T T T T T T T T C T T C C T C T T
rs226264541
MGI SNP Detail
Alliance Variant
Chr3:87343091 Fcrl5 mRNA-UTR
Rr397756 within coordinates of
Rr579488 within coordinates of
Tssr29807 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238561262
MGI SNP Detail
Alliance Variant
Chr3:87343151 Fcrl5 mRNA-UTR
Rr397756 within coordinates of
Rr579488 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46269336
MGI SNP Detail
Alliance Variant
Chr3:87343155 Fcrl5 mRNA-UTR
Rr397756 within coordinates of
Rr579488 within coordinates of
SNP C/T C C C C C C C C T C C T C T C
rs224060594
MGI SNP Detail
Alliance Variant
Chr3:87343291 Fcrl5 Intron
Rr579488 89 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30400620
MGI SNP Detail
Alliance Variant
Chr3:87343295 Fcrl5 Intron
Rr579488 93 bp distal
SNP C/T C C T C C C T C C C C T C C C C C
rs217856405
MGI SNP Detail
Alliance Variant
Chr3:87343311 Fcrl5 Intron
Rr579488 109 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233002211
MGI SNP Detail
Alliance Variant
Chr3:87343347 Fcrl5 Intron
Rr579488 145 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs252267068
MGI SNP Detail
Alliance Variant
Chr3:87343374 Fcrl5 Intron
Rr579488 172 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G A G G A G A A G G G G G G A G A G A G G A A G G
rs215225188
MGI SNP Detail
Alliance Variant
Chr3:87343529 Fcrl5 Intron
Rr579488 327 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232190235
MGI SNP Detail
Alliance Variant
Chr3:87343552 Fcrl5 Intron
Rr579488 350 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G A G G A G A A G G G G G G A G A G A G G A A G G
rs30995875
MGI SNP Detail
Alliance Variant
Chr3:87343616 Fcrl5 Intron
Rr579488 414 bp distal
SNP C/T C T C C C
rs213070096
MGI SNP Detail
Alliance Variant
Chr3:87343632 Fcrl5 Intron
Rr579488 430 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs31526205
MGI SNP Detail
Alliance Variant
Chr3:87343654 Fcrl5 Intron
Rr579488 452 bp distal
SNP A/G G A G G G
rs264344276
MGI SNP Detail
Alliance Variant
Chr3:87343668 Fcrl5 Intron
Rr579488 466 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G C G G C G C C G G G G G G C G C G C G C C G G
rs226095694
MGI SNP Detail
Alliance Variant
Chr3:87343834 Fcrl5 Intron
Rr579488 632 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs31543277
MGI SNP Detail
Alliance Variant
Chr3:87343835 Fcrl5 Intron
Rr579488 633 bp distal
SNP A/T T A T T T
rs585310461
MGI SNP Detail
Alliance Variant
Chr3:87343904 Fcrl5 Intron
Rr579488 702 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs579848541
MGI SNP Detail
Alliance Variant
Chr3:87343905 Fcrl5 Intron
Rr579488 703 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583389371
MGI SNP Detail
Alliance Variant
Chr3:87343928 Fcrl5 Intron
Rr579488 726 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs253206336
MGI SNP Detail
Alliance Variant
Chr3:87343967 Fcrl5 Intron
Rr579488 765 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs587271695
MGI SNP Detail
Alliance Variant
Chr3:87343997 Fcrl5 Intron
Rr579488 795 bp distal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs240450448
MGI SNP Detail
Alliance Variant
Chr3:87344008 Fcrl5 Intron
Rr579488 806 bp distal
SNP A/C C A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs581451440
MGI SNP Detail
Alliance Variant
Chr3:87344009 Fcrl5 Intron
Rr579488 807 bp distal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583987345
MGI SNP Detail
Alliance Variant
Chr3:87344012 Fcrl5 Intron
Rr579488 810 bp distal
SNP A/C C C C C C C C C C C C C C C C A C C C A C A C C C C C C C C C C A C C C C C
rs220658998
MGI SNP Detail
Alliance Variant
Chr3:87344066 Fcrl5 Intron
Rr579488 864 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs587592370
MGI SNP Detail
Alliance Variant
Chr3:87344146 Fcrl5 Intron
Rr579488 944 bp distal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs256504238
MGI SNP Detail
Alliance Variant
Chr3:87344268 Fcrl5 Intron
Rr579488 1066 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs31152146
MGI SNP Detail
Alliance Variant
Chr3:87344429 Fcrl5 Intron
Rr579488 1227 bp distal
SNP A/G A A G A A A
rs248133449
MGI SNP Detail
Alliance Variant
Chr3:87344577 Fcrl5 Intron
Rr579488 1375 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C T C C T C T T C C C C C C T C T C T C C T T C C
rs226267320
MGI SNP Detail
Alliance Variant
Chr3:87344693 Fcrl5 Intron
Rr579488 1491 bp distal
SNP T T T
rs242321762
MGI SNP Detail
Alliance Variant
Chr3:87344782 Fcrl5 Intron
Rr579488 1580 bp distal
SNP T T T
rs245188229
MGI SNP Detail
Alliance Variant
Chr3:87344792 Fcrl5 Intron
Rr579488 1590 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256254528
MGI SNP Detail
Alliance Variant
Chr3:87344806 Fcrl5 Intron
Rr579488 1604 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225319204
MGI SNP Detail
Alliance Variant
Chr3:87344867 Fcrl5 Intron
Rr579488 1665 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254040623
MGI SNP Detail
Alliance Variant
Chr3:87344870 Fcrl5 Intron
Rr579488 1668 bp distal
SNP T T T
rs220210949
MGI SNP Detail
Alliance Variant
Chr3:87344871 Fcrl5 Intron
Rr579488 1669 bp distal
SNP T T T
rs107919847
MGI SNP Detail
Alliance Variant
Chr3:87345138 Fcrl5 Intron
Rr579488 1936 bp distal
SNP T T T T
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Showing SNP(s) 1 - 65 of 65

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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