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Mouse SNP Summary
Symbol
Name
ID 		Rr579944
regulatory region 579944
MGI:8042076

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Showing SNP(s) 1 - 36 of 36

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236333674
MGI SNP Detail
Alliance Variant		 Chr3:88996181 Gm65858 within coordinates of
Rr579944 1963 bp proximal
Rusc1 Intron
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs584771069
MGI SNP Detail
Alliance Variant		 Chr3:88996190 Gm65858 within coordinates of
Rr579944 1954 bp proximal
Rusc1 Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs261671134
MGI SNP Detail
Alliance Variant		 Chr3:88996265 Gm65858 within coordinates of
Rr579944 1879 bp proximal
Rusc1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C C C C C C C T C C C C C C C C C C C
rs220468476
MGI SNP Detail
Alliance Variant		 Chr3:88996272 Gm65858 within coordinates of
Rr579944 1872 bp proximal
Rusc1 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G G A A A A A A A A A A A G A A A A A A G A A A A
rs241662974
MGI SNP Detail
Alliance Variant		 Chr3:88996290 Gm65858 within coordinates of
Rr579944 1854 bp proximal
Rusc1 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs252867269
MGI SNP Detail
Alliance Variant		 Chr3:88996321 Gm65858 within coordinates of
Rr579944 1823 bp proximal
Rusc1 Coding-Synonymous
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T T G G G G G G G G G G T G G G G G G G G G G G
rs221717899
MGI SNP Detail
Alliance Variant		 Chr3:88996425 Gm65858 within coordinates of
Rr579944 1719 bp proximal
Rusc1 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T T G G G G G G G G G G G T G G G G G G G G G G G
rs239494127
MGI SNP Detail
Alliance Variant		 Chr3:88996444 Gm65858 within coordinates of
Rr579944 1700 bp proximal
Rusc1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262891395
MGI SNP Detail
Alliance Variant		 Chr3:88996691 Gm65858 within coordinates of
Rr579944 1453 bp proximal
Rusc1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs230541035
MGI SNP Detail
Alliance Variant		 Chr3:88996867 Gm65858 within coordinates of
Rr579944 1277 bp proximal
Rusc1 Coding-Synonymous
Rusc1 Splice-Site
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T T A A A A A A A A A A A T A A A A A A A A A A A A
rs241896759
MGI SNP Detail
Alliance Variant		 Chr3:88996915 Gm65858 within coordinates of
Rr579944 1229 bp proximal
Rusc1 Intron
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs264555614
MGI SNP Detail
Alliance Variant		 Chr3:88996916 Gm65858 within coordinates of
Rr579944 1228 bp proximal
Rusc1 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs228925303
MGI SNP Detail
Alliance Variant		 Chr3:88996947 Cpgi13396 within coordinates of
Gm65858 within coordinates of
Rr579944 1197 bp proximal
Rusc1 Intron
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G G C C C C C C C C C C C G C C C C C C C G C C C C
rs247723700
MGI SNP Detail
Alliance Variant		 Chr3:88997468 Cpgi13396 within coordinates of
Rr397780 within coordinates of
Rr579943 within coordinates of
Rr579944 676 bp proximal
Rusc1 Intron
Rusc1 mRNA-UTR
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs215883213
MGI SNP Detail
Alliance Variant		 Chr3:88997479 Cpgi13396 within coordinates of
Rr397780 within coordinates of
Rr579943 within coordinates of
Rr579944 665 bp proximal
Rusc1 Intron
Rusc1 mRNA-UTR
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs227355059
MGI SNP Detail
Alliance Variant		 Chr3:88997480 Cpgi13396 within coordinates of
Rr397780 within coordinates of
Rr579943 within coordinates of
Rr579944 664 bp proximal
Rusc1 Intron
Rusc1 mRNA-UTR
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245720563
MGI SNP Detail
Alliance Variant		 Chr3:88997696 Cpgi13396 within coordinates of
Rr579943 within coordinates of
Rr579944 448 bp proximal
Rusc1 Intron
Rusc1 mRNA-UTR
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213557071
MGI SNP Detail
Alliance Variant		 Chr3:88998067 Cpgi13396 within coordinates of
Rr579944 77 bp proximal
Rusc1 Coding-NonSynonymous
Rusc1 Intron
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs237130275
MGI SNP Detail
Alliance Variant		 Chr3:88998125 Cpgi13396 within coordinates of
Rr579944 19 bp proximal
Rusc1 Coding-Synonymous
Rusc1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G
rs256436748
MGI SNP Detail
Alliance Variant		 Chr3:88998286 Cpgi13396 within coordinates of
Rr579944 121 bp distal
Rusc1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs212497457
MGI SNP Detail
Alliance Variant		 Chr3:88998379 Cpgi13396 within coordinates of
Rr579944 214 bp distal
Rusc1 Intron
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235259590
MGI SNP Detail
Alliance Variant		 Chr3:88998470 Cpgi13396 within coordinates of
Rr579944 305 bp distal
Rusc1 Coding-Synonymous
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G G C C C C G C C C C C C G C C C C C C G C C C C
rs252708858
MGI SNP Detail
Alliance Variant		 Chr3:88998481 Cpgi13396 within coordinates of
Rr579944 316 bp distal
Rusc1 Coding-NonSynonymous
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A A A A A A A A G A A A A A A G A A A A
rs221492092
MGI SNP Detail
Alliance Variant		 Chr3:88998515 Cpgi13396 within coordinates of
Rr579944 350 bp distal
Rusc1 Coding-Synonymous
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs233146959
MGI SNP Detail
Alliance Variant		 Chr3:88998557 Cpgi13396 within coordinates of
Rr579944 392 bp distal
Rusc1 Coding-Synonymous
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262672243
MGI SNP Detail
Alliance Variant		 Chr3:88998616 Cpgi13396 within coordinates of
Rr579944 451 bp distal
Rusc1 Coding-NonSynonymous
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs222805023
MGI SNP Detail
Alliance Variant		 Chr3:88998733 Cpgi13396 within coordinates of
Rr579944 568 bp distal
Rusc1 Coding-Synonymous
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245389111
MGI SNP Detail
Alliance Variant		 Chr3:88998738 Cpgi13396 within coordinates of
Rr579944 573 bp distal
Rusc1 Coding-NonSynonymous
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs261310526
MGI SNP Detail
Alliance Variant		 Chr3:88998740 Cpgi13396 within coordinates of
Rr579944 575 bp distal
Rusc1 Coding-Synonymous
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs223310575
MGI SNP Detail
Alliance Variant		 Chr3:88998770 Cpgi13396 within coordinates of
Rr579944 605 bp distal
Rusc1 Coding-Synonymous
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs32926565
MGI SNP Detail
Alliance Variant		 Chr3:88999351 Rr579944 1186 bp distal
Rusc1 Coding-Synonymous
 SNP A/G G G G G G G G G G A G G G G
rs241695655
MGI SNP Detail
Alliance Variant		 Chr3:88999358 Rr579944 1193 bp distal
Rusc1 Coding-Synonymous
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259554031
MGI SNP Detail
Alliance Variant		 Chr3:88999504 Rr579944 1339 bp distal
Rusc1 Coding-NonSynonymous
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32926568
MGI SNP Detail
Alliance Variant		 Chr3:88999799 Rr579944 1634 bp distal
Rusc1 mRNA-UTR
 SNP C/T C C C C C C T C C C C C C C
rs32920204
MGI SNP Detail
Alliance Variant		 Chr3:89000030 Rr579944 1865 bp distal
Rusc1 Intron
 SNP A/G G G G G G G A G G G G G G G
rs265073806
MGI SNP Detail
Alliance Variant		 Chr3:89000111 Rr579944 1946 bp distal
Rusc1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
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Showing SNP(s) 1 - 36 of 36
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory