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Mouse SNP Summary
Symbol
Name
ID
Rr580006
regulatory region 580006
MGI:8042138

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Showing SNP(s) 1 - 74 of 74

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32932525
MGI SNP Detail
Chr3:89159303 Rr580002 within coordinates of
Rr580006 1981 bp proximal
SNP G/T G G G G G G T G G G T G G
rs32932528
MGI SNP Detail
Chr3:89159353 Rr580002 within coordinates of
Rr580006 1931 bp proximal
SNP A/G G G G G G G G G G G A G G G
rs238990361
MGI SNP Detail
Chr3:89159454 Rr580006 1830 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249631455
MGI SNP Detail
Chr3:89159477 Rr580006 1807 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T T A A A A T A A A A A A T A A A A A A A T A A A A
rs212774530
MGI SNP Detail
Chr3:89159507 Rr580006 1777 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A G A A A A A A G A A A A A A A A A A A A
rs229808974
MGI SNP Detail
Chr3:89159657 Rr580006 1627 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A A T T T T T T T T T T T A T T T T T T T T T T T T
rs253079112
MGI SNP Detail
Chr3:89159808 Rr580006 1476 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C G C C C C C C C C C C
rs32932531
MGI SNP Detail
Chr3:89159856 Rr580006 1428 bp proximal
SNP C/T C C C C C C C C C C T C C C
rs32933174
MGI SNP Detail
Chr3:89159893 Rr580006 1391 bp proximal
SNP A/G G G G G G G A G G G A G G
rs247612940
MGI SNP Detail
Chr3:89159948 Rr580006 1336 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263415052
MGI SNP Detail
Chr3:89159985 Rr580006 1299 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224257888
MGI SNP Detail
Chr3:89160025 Rr580006 1259 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247323612
MGI SNP Detail
Chr3:89160026 Rr580006 1258 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A G A A A A A A G A A A A A A A G A A A A
rs32933177
MGI SNP Detail
Chr3:89160027 Rr580006 1257 bp proximal
SNP A/G A A A A A A A A G A A A
rs585642990
MGI SNP Detail
Chr3:89160104 Rr580006 1180 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T
rs225241674
MGI SNP Detail
Chr3:89160108 Rr580006 1176 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs237576182
MGI SNP Detail
Chr3:89160121 Rr580006 1163 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs261469598
MGI SNP Detail
Chr3:89160293 Rr580006 991 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T C T T T T T T C T T T T T T T C T T T T
rs233831501
MGI SNP Detail
Chr3:89160363 Rr580006 921 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252882691
MGI SNP Detail
Chr3:89160374 Rr580006 910 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32933180
MGI SNP Detail
Chr3:89160429 Rr580006 855 bp proximal
SNP C/T C C C C C C T C C C C C C
rs32933183
MGI SNP Detail
Chr3:89160430 Rr580006 854 bp proximal
SNP C/G G G G G G G G G G C G G G
rs230575215
MGI SNP Detail
Chr3:89160550 Rr580006 734 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243808046
MGI SNP Detail
Chr3:89160605 Rr580006 679 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212909950
MGI SNP Detail
Chr3:89160612 Rr580006 672 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229964026
MGI SNP Detail
Chr3:89160625 Rr580006 659 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T C T T T T T T C T T T T T T T C T T T T
rs253104728
MGI SNP Detail
Chr3:89160646 Rr580006 638 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T C T T T T T T C T T T T T T T C T T T T
rs217801922
MGI SNP Detail
Chr3:89160724 Rr580006 560 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs32933866
MGI SNP Detail
Chr3:89160800 Rr580006 484 bp proximal
SNP A/G G G G G G A G G G G
rs32933869
MGI SNP Detail
Chr3:89160813 Rr580006 471 bp proximal
SNP C/T C C C C C C C C C T C C C
rs242334685
MGI SNP Detail
Chr3:89160847 Rr580006 437 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs259606088
MGI SNP Detail
Chr3:89160872 Rr580006 412 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs224305312
MGI SNP Detail
Chr3:89160902 Rr580006 382 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579874390
MGI SNP Detail
Chr3:89161013 Rr580006 271 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs583613041
MGI SNP Detail
Chr3:89161016 Rr580006 268 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs232875959
MGI SNP Detail
Chr3:89161048 Rr580006 236 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A A A A A A G A A A A A A A A A A
rs251274501
MGI SNP Detail
Chr3:89161099 Rr580006 185 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T C T T T T T T C T T T T T T T C T T T
rs219226274
MGI SNP Detail
Chr3:89161155 Rr580006 129 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C G C C C C
rs237614430
MGI SNP Detail
Chr3:89161172 Rr580006 112 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs266220915
MGI SNP Detail
Chr3:89161200 Rr580006 84 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs226033910
MGI SNP Detail
Chr3:89161202 Rr580006 82 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs248672402
MGI SNP Detail
Chr3:89161313 Rr580006 8 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs263040735
MGI SNP Detail
Chr3:89161353 Rr580006 48 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T C T T T T T T C T T T T T T T C T T T T
rs230898633
MGI SNP Detail
Chr3:89161374 Rr580006 69 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs243556434
MGI SNP Detail
Chr3:89161396 Rr580006 91 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs254313511
MGI SNP Detail
Chr3:89161541 Rr580006 236 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs223510293
MGI SNP Detail
Chr3:89161550 Rr580006 245 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247386269
MGI SNP Detail
Chr3:89161577 Rr580006 272 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C C G G G G C G G G G G G C G G G G G G G G G G G G
rs217986752
MGI SNP Detail
Chr3:89161594 Rr580006 289 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32933871
MGI SNP Detail
Chr3:89161787 Rr580006 482 bp distal
SNP C/G G G G G G G G G G C G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs586262159
MGI SNP Detail
Chr3:89161893 Rr580006 588 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580444887
MGI SNP Detail
Chr3:89161901 Rr580006 596 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs584199352
MGI SNP Detail
Chr3:89161904 Rr580006 599 bp distal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs587556966
MGI SNP Detail
Chr3:89161933 Rr580006 628 bp distal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs580597717
MGI SNP Detail
Chr3:89161945 Rr580006 640 bp distal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs258481127
MGI SNP Detail
Chr3:89162039 Rr580006 734 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T T A A A A T A A A A A A T A A A A A A A T A A A A
rs215987437
MGI SNP Detail
Chr3:89162201 Rr580006 896 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A G A A A A A A G A A A A A A A G A A A G
rs233043651
MGI SNP Detail
Chr3:89162315 Rr580006 1010 bp distal
Rr580007 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T C T T T T T T C T T T T T T T C T T T T
rs251307351
MGI SNP Detail
Chr3:89162361 Rr580006 1056 bp distal
Rr580008 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C C C C C C C T C C C C C C C C C C C C
rs218905044
MGI SNP Detail
Chr3:89162436 Rr580006 1131 bp distal
Rr580008 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs230226860
MGI SNP Detail
Chr3:89162447 Rr580006 1142 bp distal
Rr580008 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261144958
MGI SNP Detail
Chr3:89162452 Rr580006 1147 bp distal
Rr580008 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A A C C C C A C C C C C C A C C C C C C C A C C C C
rs226521350
MGI SNP Detail
Chr3:89162477 Rr580006 1172 bp distal
Rr580008 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T C T T T T T T C T T T T T T T C T T T T
rs246797077
MGI SNP Detail
Chr3:89162555 Rr580006 1250 bp distal
Rr580008 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G G A A A A G A A A A A A G A A A A A A A A A A A A
rs582956761
MGI SNP Detail
Chr3:89162671 Rr580006 1366 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs265573997
MGI SNP Detail
Chr3:89162704 Rr580006 1399 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T
rs219899948
MGI SNP Detail
Chr3:89162744 Rr580006 1439 bp distal
Rr580009 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs237260317
MGI SNP Detail
Chr3:89162879 Rr580006 1574 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs254350621
MGI SNP Detail
Chr3:89162933 Rr580006 1628 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs586853063
MGI SNP Detail
Chr3:89163018 Rr580006 1713 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223154396
MGI SNP Detail
Chr3:89163047 Rr580006 1742 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A G A A A A A G A A A A A A A G A A A A
rs256054253
MGI SNP Detail
Chr3:89163158 Rr580006 1853 bp distal
SNP C/T T C
rs581029673
MGI SNP Detail
Chr3:89163287 Rr580006 1982 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs260174131
MGI SNP Detail
Chr3:89163302 Rr580006 1997 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
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Showing SNP(s) 1 - 74 of 74

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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