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Mouse SNP Summary
Symbol
Name
ID
Rr580007
regulatory region 580007
MGI:8042139

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Showing SNP(s) 1 - 74 of 74

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233831501
MGI SNP Detail
Chr3:89160363 Rr580007 1933 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252882691
MGI SNP Detail
Chr3:89160374 Rr580007 1922 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32933180
MGI SNP Detail
Chr3:89160429 Rr580007 1867 bp proximal
SNP C/T C C C C C C T C C C C C C
rs32933183
MGI SNP Detail
Chr3:89160430 Rr580007 1866 bp proximal
SNP C/G G G G G G G G G G C G G G
rs230575215
MGI SNP Detail
Chr3:89160550 Rr580007 1746 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243808046
MGI SNP Detail
Chr3:89160605 Rr580007 1691 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212909950
MGI SNP Detail
Chr3:89160612 Rr580007 1684 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs229964026
MGI SNP Detail
Chr3:89160625 Rr580007 1671 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T C T T T T T T C T T T T T T T C T T T T
rs253104728
MGI SNP Detail
Chr3:89160646 Rr580007 1650 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T C T T T T T T C T T T T T T T C T T T T
rs217801922
MGI SNP Detail
Chr3:89160724 Rr580007 1572 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs32933866
MGI SNP Detail
Chr3:89160800 Rr580007 1496 bp proximal
SNP A/G G G G G G A G G G G
rs32933869
MGI SNP Detail
Chr3:89160813 Rr580007 1483 bp proximal
SNP C/T C C C C C C C C C T C C C
rs242334685
MGI SNP Detail
Chr3:89160847 Rr580007 1449 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs259606088
MGI SNP Detail
Chr3:89160872 Rr580007 1424 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs224305312
MGI SNP Detail
Chr3:89160902 Rr580007 1394 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579874390
MGI SNP Detail
Chr3:89161013 Rr580007 1283 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs583613041
MGI SNP Detail
Chr3:89161016 Rr580007 1280 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs232875959
MGI SNP Detail
Chr3:89161048 Rr580007 1248 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A A A A A A G A A A A A A A A A A
rs251274501
MGI SNP Detail
Chr3:89161099 Rr580007 1197 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T C T T T T T T C T T T T T T T C T T T
rs219226274
MGI SNP Detail
Chr3:89161155 Rr580007 1141 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C G C C C C
rs237614430
MGI SNP Detail
Chr3:89161172 Rr580007 1124 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs266220915
MGI SNP Detail
Chr3:89161200 Rr580007 1096 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs226033910
MGI SNP Detail
Chr3:89161202 Rr580007 1094 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs248672402
MGI SNP Detail
Chr3:89161313 Rr580007 983 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs263040735
MGI SNP Detail
Chr3:89161353 Rr580007 943 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T C T T T T T T C T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230898633
MGI SNP Detail
Chr3:89161374 Rr580007 922 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs243556434
MGI SNP Detail
Chr3:89161396 Rr580007 900 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs254313511
MGI SNP Detail
Chr3:89161541 Rr580007 755 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs223510293
MGI SNP Detail
Chr3:89161550 Rr580007 746 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247386269
MGI SNP Detail
Chr3:89161577 Rr580007 719 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C C G G G G C G G G G G G C G G G G G G G G G G G G
rs217986752
MGI SNP Detail
Chr3:89161594 Rr580007 702 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32933871
MGI SNP Detail
Chr3:89161787 Rr580007 509 bp proximal
SNP C/G G G G G G G G G G C G G G
rs586262159
MGI SNP Detail
Chr3:89161893 Rr580007 403 bp proximal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580444887
MGI SNP Detail
Chr3:89161901 Rr580007 395 bp proximal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs584199352
MGI SNP Detail
Chr3:89161904 Rr580007 392 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs587556966
MGI SNP Detail
Chr3:89161933 Rr580007 363 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs580597717
MGI SNP Detail
Chr3:89161945 Rr580007 351 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs258481127
MGI SNP Detail
Chr3:89162039 Rr580007 257 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T T A A A A T A A A A A A T A A A A A A A T A A A A
rs215987437
MGI SNP Detail
Chr3:89162201 Rr580007 95 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A G A A A A A A G A A A A A A A G A A A G
rs233043651
MGI SNP Detail
Chr3:89162315 Rr580007 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T C T T T T T T C T T T T T T T C T T T T
rs251307351
MGI SNP Detail
Chr3:89162361 Rr580007 44 bp distal
Rr580008 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C C C C C C C T C C C C C C C C C C C C
rs218905044
MGI SNP Detail
Chr3:89162436 Rr580007 119 bp distal
Rr580008 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs230226860
MGI SNP Detail
Chr3:89162447 Rr580007 130 bp distal
Rr580008 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261144958
MGI SNP Detail
Chr3:89162452 Rr580007 135 bp distal
Rr580008 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A A C C C C A C C C C C C A C C C C C C C A C C C C
rs226521350
MGI SNP Detail
Chr3:89162477 Rr580007 160 bp distal
Rr580008 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T C T T T T T T C T T T T T T T C T T T T
rs246797077
MGI SNP Detail
Chr3:89162555 Rr580007 238 bp distal
Rr580008 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G G A A A A G A A A A A A G A A A A A A A A A A A A
rs582956761
MGI SNP Detail
Chr3:89162671 Rr580007 354 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs265573997
MGI SNP Detail
Chr3:89162704 Rr580007 387 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T
rs219899948
MGI SNP Detail
Chr3:89162744 Rr580007 427 bp distal
Rr580009 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs237260317
MGI SNP Detail
Chr3:89162879 Rr580007 562 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254350621
MGI SNP Detail
Chr3:89162933 Rr580007 616 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs586853063
MGI SNP Detail
Chr3:89163018 Rr580007 701 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223154396
MGI SNP Detail
Chr3:89163047 Rr580007 730 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A G A A A A A G A A A A A A A G A A A A
rs256054253
MGI SNP Detail
Chr3:89163158 Rr580007 841 bp distal
SNP C/T T C
rs581029673
MGI SNP Detail
Chr3:89163287 Rr580007 970 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs260174131
MGI SNP Detail
Chr3:89163302 Rr580007 985 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs263985291
MGI SNP Detail
Chr3:89163354 Rr580007 1037 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs233067124
MGI SNP Detail
Chr3:89163355 Rr580007 1038 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs252179128
MGI SNP Detail
Chr3:89163404 Rr580007 1087 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214961598
MGI SNP Detail
Chr3:89163411 Rr580007 1094 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233099758
MGI SNP Detail
Chr3:89163413 Rr580007 1096 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs225567172
MGI SNP Detail
Chr3:89163426 Rr580007 1109 bp distal
SNP A/T T A
rs245122861
MGI SNP Detail
Chr3:89163696 Rr580007 1379 bp distal
Rr580010 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs32933873
MGI SNP Detail
Chr3:89163741 Rr580007 1424 bp distal
Rr580010 within coordinates of
SNP C/T C C C C C C T C C C C C C
rs32934675
MGI SNP Detail
Chr3:89163817 Rr580007 1500 bp distal
Rr580010 within coordinates of
SNP C/T T T T T T T C T T T C T T T
rs264256693
MGI SNP Detail
Chr3:89163899 Rr580007 1582 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218648306
MGI SNP Detail
Chr3:89163924 Rr580007 1607 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs241543230
MGI SNP Detail
Chr3:89163963 Rr580007 1646 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258942580
MGI SNP Detail
Chr3:89164014 Rr580007 1697 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs220251859
MGI SNP Detail
Chr3:89164047 Rr580007 1730 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T T C C C C T C C C C C C T C C C C C C C C C C C C
rs237300717
MGI SNP Detail
Chr3:89164073 Rr580007 1756 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G G C C C C G C C C C C C G C C C C C C C C C C C C
rs248664254
MGI SNP Detail
Chr3:89164105 Rr580007 1788 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C C C C C C C T C C C C C C C C C C C C
rs217683578
MGI SNP Detail
Chr3:89164138 Rr580007 1821 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs248088605
MGI SNP Detail
Chr3:89164249 Rr580007 1932 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C C C C C C C T C C C C C C C C C C C C
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Showing SNP(s) 1 - 74 of 74

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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