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Mouse SNP Summary
Symbol
Name
ID 		Rr580030
regulatory region 580030
MGI:8042162

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234924754
MGI SNP Detail		 Chr3:89206022 Gm33845 within coordinates of
Rr580030 1996 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T C T T T T T T C T T T T T T T C T T T T
rs253810193
MGI SNP Detail		 Chr3:89206038 Gm33845 within coordinates of
Rr580030 1980 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs216967933
MGI SNP Detail		 Chr3:89206095 Gm33845 within coordinates of
Rr580030 1923 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T T A A A A T A A A A A A T A A A A A A A T A A A A
rs232737616
MGI SNP Detail		 Chr3:89206263 Gm33845 within coordinates of
Rr580030 1755 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C A C A C C C C C C C A C A C C C C C C C C
rs32934255
MGI SNP Detail		 Chr3:89206331 Gm33845 within coordinates of
Rr580030 1687 bp proximal
 SNP G/T G G G G G G T G G G G G G G T
rs214556373
MGI SNP Detail		 Chr3:89206368 Gm33845 within coordinates of
Rr580030 1650 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231516886
MGI SNP Detail		 Chr3:89206404 Gm33845 within coordinates of
Rr580030 1614 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs248954607
MGI SNP Detail		 Chr3:89206470 Gm33845 within coordinates of
Rr580030 1548 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220941273
MGI SNP Detail		 Chr3:89206485 Gm33845 within coordinates of
Rr580030 1533 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs251800694
MGI SNP Detail		 Chr3:89206499 Gm33845 within coordinates of
Rr580030 1519 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs260489289
MGI SNP Detail		 Chr3:89206505 Gm33845 within coordinates of
Rr580030 1513 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs225580221
MGI SNP Detail		 Chr3:89206626 Gm33845 within coordinates of
Rr580029 within coordinates of
Rr580030 1392 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G A A G G G G G G G A G G G A G G G
rs240784419
MGI SNP Detail		 Chr3:89206636 Gm33845 within coordinates of
Rr580029 within coordinates of
Rr580030 1382 bp proximal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs581695645
MGI SNP Detail		 Chr3:89206648 Gm33845 within coordinates of
Rr580029 within coordinates of
Rr580030 1370 bp proximal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs258148024
MGI SNP Detail		 Chr3:89206692 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 1326 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs225522379
MGI SNP Detail		 Chr3:89206744 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 1274 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs237761500
MGI SNP Detail		 Chr3:89206759 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 1259 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs264457579
MGI SNP Detail		 Chr3:89206874 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 1144 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233858193
MGI SNP Detail		 Chr3:89206896 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 1122 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T T T T T T T T C T T T T T T T C T T T T
rs259220870
MGI SNP Detail		 Chr3:89206929 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 1089 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216649187
MGI SNP Detail		 Chr3:89206960 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 1058 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A G A A A A A A G A A A A A A A G A A A A
rs226755367
MGI SNP Detail		 Chr3:89206970 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 1048 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs32934258
MGI SNP Detail		 Chr3:89207007 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 1011 bp proximal
 SNP A/C C C C C C C A C C C C C C
rs32934261
MGI SNP Detail		 Chr3:89207042 Cpgi13418 within coordinates of
Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 976 bp proximal
 SNP A/C C C C C C C C C C C C A C
rs231544342
MGI SNP Detail		 Chr3:89207043 Cpgi13418 within coordinates of
Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 975 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32934262
MGI SNP Detail		 Chr3:89207131 Cpgi13418 within coordinates of
Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 887 bp proximal
 SNP C/T T T T T T T C T T T C C
rs212282459
MGI SNP Detail		 Chr3:89207176 Cpgi13418 within coordinates of
Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 842 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240379673
MGI SNP Detail		 Chr3:89207249 Cpgi13418 within coordinates of
Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 769 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32935124
MGI SNP Detail		 Chr3:89207272 Cpgi13418 within coordinates of
Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 746 bp proximal
 SNP C/T C C C C C C C C C C C T C
rs225310883
MGI SNP Detail		 Chr3:89207427 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 591 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs6291006
MGI SNP Detail		 Chr3:89207453 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 565 bp proximal
 SNP C/G C G
rs6291516
MGI SNP Detail		 Chr3:89207545 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 473 bp proximal
 SNP C/T T C
rs6292520
MGI SNP Detail		 Chr3:89207706 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 312 bp proximal
 SNP C/T C T
rs219373476
MGI SNP Detail		 Chr3:89207715 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 303 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs237798574
MGI SNP Detail		 Chr3:89207772 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 246 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A G A A A A A A G A A A A A A A A A A A A
rs244473907
MGI SNP Detail		 Chr3:89207853 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 165 bp proximal
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs255189528
MGI SNP Detail		 Chr3:89207986 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 32 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A A C C C C C C C C C C C A C C C C C C C A C C C C
rs225497369
MGI SNP Detail		 Chr3:89208002 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 16 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G G C C C C C C C C C C C G C C C C C C C C C C C C
rs254442046
MGI SNP Detail		 Chr3:89208039 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580029 within coordinates of
Rr580030 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G G A A A A A A A A A A A G A A A A A A A G A A A A
rs212192209
MGI SNP Detail		 Chr3:89208090 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 51 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A T A A A A T T A A A A A A A A A A A T A A A A A A A T A A A A
rs243172373
MGI SNP Detail		 Chr3:89208091 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 52 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A T A A A A T T A A A A A A A A A A A T A A A A A A A T A A A A
rs32935126
MGI SNP Detail		 Chr3:89208122 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 83 bp distal
 SNP C/T T T T C T T C T T T C
rs216304266
MGI SNP Detail		 Chr3:89208128 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 89 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234313089
MGI SNP Detail		 Chr3:89208148 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 109 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs252325835
MGI SNP Detail		 Chr3:89208225 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 186 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219837552
MGI SNP Detail		 Chr3:89208245 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 206 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs235669869
MGI SNP Detail		 Chr3:89208266 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 227 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G G T T T T G T T T T T T G T T T T T T T G T T T T
rs584013222
MGI SNP Detail		 Chr3:89208396 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 357 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T T T T T T T T C T T T T T T T C T T T T
rs578565535
MGI SNP Detail		 Chr3:89208406 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 367 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581788449
MGI SNP Detail		 Chr3:89208424 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 385 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs584516617
MGI SNP Detail		 Chr3:89208428 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 389 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs578738302
MGI SNP Detail		 Chr3:89208434 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 395 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T C T T T T T T T T T T T
rs582469207
MGI SNP Detail		 Chr3:89208446 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 407 bp distal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs586233922
MGI SNP Detail		 Chr3:89208450 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 411 bp distal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580355005
MGI SNP Detail		 Chr3:89208454 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 415 bp distal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582925673
MGI SNP Detail		 Chr3:89208472 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 433 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260729758
MGI SNP Detail		 Chr3:89208503 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 464 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs226420067
MGI SNP Detail		 Chr3:89208556 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 517 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G G C C C C C C C C C C C G C C C C C C C C C C C C
rs585993274
MGI SNP Detail		 Chr3:89208597 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 558 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C C C C C C C C C C C
rs579480223
MGI SNP Detail		 Chr3:89208601 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 562 bp distal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs249771811
MGI SNP Detail		 Chr3:89208659 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 620 bp distal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs263394781
MGI SNP Detail		 Chr3:89208727 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 688 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220730724
MGI SNP Detail		 Chr3:89208732 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 693 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G G T T T T T T T T T T T G T T T T T T T T T T T T
rs238312410
MGI SNP Detail		 Chr3:89208839 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 800 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs32935129
MGI SNP Detail		 Chr3:89208845 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 806 bp distal
 SNP A/G A A A A A A A A A G G A G A
rs224270451
MGI SNP Detail		 Chr3:89208920 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 881 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T A T T T T T T T T T T T T
rs249022947
MGI SNP Detail		 Chr3:89208954 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 915 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264706616
MGI SNP Detail		 Chr3:89208973 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 934 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234004426
MGI SNP Detail		 Chr3:89208989 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 950 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259285195
MGI SNP Detail		 Chr3:89209014 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 975 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A G A A A A A A G A A A A A A A G A A A A
rs580028585
MGI SNP Detail		 Chr3:89209086 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1047 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs215946060
MGI SNP Detail		 Chr3:89209115 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1076 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs227403661
MGI SNP Detail		 Chr3:89209135 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1096 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs246114120
MGI SNP Detail		 Chr3:89209162 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1123 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G G T T T T G T T T T T T G T T T T T T T G T T T T
rs213979806
MGI SNP Detail		 Chr3:89209218 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1179 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237493458
MGI SNP Detail		 Chr3:89209295 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1256 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A T A A A A T T A A A A A A A A A A A T A A A A A A A A A A A A
rs255721974
MGI SNP Detail		 Chr3:89209313 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1274 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T T T T T T T T C T T T T T T T T T T T T
rs583684525
MGI SNP Detail		 Chr3:89209314 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1275 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs587303121
MGI SNP Detail		 Chr3:89209327 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1288 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C C T T T T T T T T T T T C T T T T T T T T T T T T
rs581494443
MGI SNP Detail		 Chr3:89209329 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1290 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C C T T T T T T T T T T T C T T T T T T T T T T T T
rs585000078
MGI SNP Detail		 Chr3:89209330 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1291 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs218835955
MGI SNP Detail		 Chr3:89209404 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1365 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs239219946
MGI SNP Detail		 Chr3:89209419 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1380 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs580610104
MGI SNP Detail		 Chr3:89209612 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1573 bp distal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584408074
MGI SNP Detail		 Chr3:89209614 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1575 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C C C C C T C C C C C C C C C C
rs251666753
MGI SNP Detail		 Chr3:89209661 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1622 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C C C C C C C T C C C C C C C C C C C
rs32935131
MGI SNP Detail		 Chr3:89209683 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1644 bp distal
 SNP G/T T T T T T T T T T T T T G T
rs238058624
MGI SNP Detail		 Chr3:89209690 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1651 bp distal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs218625621
MGI SNP Detail		 Chr3:89209702 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1663 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C C T T T T C T T T T T T C T T T T T T T T T T
rs243871487
MGI SNP Detail		 Chr3:89209709 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1670 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C C T T T T C T T T T T T C T T T T T T T T T T
rs264350587
MGI SNP Detail		 Chr3:89209729 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1690 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G
rs235164213
MGI SNP Detail		 Chr3:89209746 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1707 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs247708660
MGI SNP Detail		 Chr3:89209777 Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1738 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T T T T T T T C T T T T T T T T T T T
rs260094804
MGI SNP Detail
Alliance Variant		 Chr3:89209789 Gm22642 Noncoding-Transcript-Variant
Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1750 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A A G G G G G G G G G G A G G G G G G G G G G G
rs227447433
MGI SNP Detail
Alliance Variant		 Chr3:89209794 Gm22642 Noncoding-Transcript-Variant
Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1755 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C C T T T T T T T T T T C T T T T T T T T T T T
rs245783085
MGI SNP Detail
Alliance Variant		 Chr3:89209812 Gm22642 Noncoding-Transcript-Variant
Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1773 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A A C C C C C C C C C C C C C C C C C C C C C C
rs214008496
MGI SNP Detail
Alliance Variant		 Chr3:89209830 Gm22642 Noncoding-Transcript-Variant
Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1791 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C
rs229254712
MGI SNP Detail
Alliance Variant		 Chr3:89209836 Gm22642 Noncoding-Transcript-Variant
Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1797 bp distal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs253162991
MGI SNP Detail
Alliance Variant		 Chr3:89209921 Gm22642 Noncoding-Transcript-Variant
Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1882 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A G A A A A A A A A A A A
rs219557580
MGI SNP Detail
Alliance Variant		 Chr3:89209926 Gm22642 Noncoding-Transcript-Variant
Gm33845 within coordinates of
Gm65883 within coordinates of
Rr580030 1887 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A A A A A A A A A A A C A A A A A A A A A A A
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Showing SNP(s) 1 - 100 of 108
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory