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Mouse SNP Summary
Symbol
Name
ID 		Rr580910
regulatory region 580910
MGI:8043042

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236429040
MGI SNP Detail		 Chr3:95220438 6330562C20Rik within coordinates of
Rr580904 within coordinates of
Rr580910 1980 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs256460092
MGI SNP Detail		 Chr3:95220440 6330562C20Rik within coordinates of
Rr580904 within coordinates of
Rr580910 1978 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs226245751
MGI SNP Detail		 Chr3:95220462 6330562C20Rik within coordinates of
Rr580904 within coordinates of
Rr580910 1956 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C T T T C C C C C C C C C
rs242851309
MGI SNP Detail		 Chr3:95220550 6330562C20Rik within coordinates of
Rr580910 1868 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587551152
MGI SNP Detail		 Chr3:95220635 6330562C20Rik within coordinates of
Rr580910 1783 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G A G G G G G G G G G G
rs253207752
MGI SNP Detail		 Chr3:95220651 6330562C20Rik within coordinates of
Rr580910 1767 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs222248245
MGI SNP Detail		 Chr3:95220703 6330562C20Rik within coordinates of
Rr580906 within coordinates of
Rr580910 1715 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs239177024
MGI SNP Detail		 Chr3:95220723 6330562C20Rik within coordinates of
Rr580906 within coordinates of
Rr580910 1695 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs258631790
MGI SNP Detail		 Chr3:95220736 6330562C20Rik within coordinates of
Rr580906 within coordinates of
Rr580910 1682 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs228016219
MGI SNP Detail		 Chr3:95220822 6330562C20Rik within coordinates of
Rr580906 within coordinates of
Rr580910 1596 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243705616
MGI SNP Detail		 Chr3:95220847 6330562C20Rik within coordinates of
Rr580906 within coordinates of
Rr580910 1571 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs261838136
MGI SNP Detail		 Chr3:95220856 6330562C20Rik within coordinates of
Rr580906 within coordinates of
Rr580910 1562 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs233663430
MGI SNP Detail		 Chr3:95220927 6330562C20Rik within coordinates of
Rr580906 within coordinates of
Rr580910 1491 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs247156881
MGI SNP Detail		 Chr3:95220961 6330562C20Rik within coordinates of
Rr580906 within coordinates of
Rr580910 1457 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs215162153
MGI SNP Detail		 Chr3:95220974 6330562C20Rik within coordinates of
Rr580906 within coordinates of
Rr580910 1444 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs227584811
MGI SNP Detail		 Chr3:95221032 6330562C20Rik within coordinates of
Rr580906 within coordinates of
Rr580910 1386 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31137020
MGI SNP Detail		 Chr3:95221051 6330562C20Rik within coordinates of
Rr580906 within coordinates of
Rr580910 1367 bp proximal
 SNP A/G G A A A
rs214939836
MGI SNP Detail		 Chr3:95221054 6330562C20Rik within coordinates of
Rr580906 within coordinates of
Rr580910 1364 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs234572510
MGI SNP Detail		 Chr3:95221060 6330562C20Rik within coordinates of
Rr580906 within coordinates of
Rr580910 1358 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs261641168
MGI SNP Detail		 Chr3:95221061 6330562C20Rik within coordinates of
Rr580906 within coordinates of
Rr580910 1357 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G A A A G G G G G G G G G
rs218321374
MGI SNP Detail		 Chr3:95221083 6330562C20Rik within coordinates of
Rr580906 within coordinates of
Rr580910 1335 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs236433882
MGI SNP Detail		 Chr3:95221180 6330562C20Rik within coordinates of
Rr580906 within coordinates of
Rr580910 1238 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs252966654
MGI SNP Detail		 Chr3:95221262 6330562C20Rik within coordinates of
Rr580906 within coordinates of
Rr580910 1156 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs222213279
MGI SNP Detail		 Chr3:95221263 6330562C20Rik within coordinates of
Rr580906 within coordinates of
Rr580910 1155 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs239235747
MGI SNP Detail		 Chr3:95221363 6330562C20Rik within coordinates of
Rr580910 1055 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258247748
MGI SNP Detail		 Chr3:95221372 6330562C20Rik within coordinates of
Rr580910 1046 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs220390263
MGI SNP Detail		 Chr3:95221422 6330562C20Rik within coordinates of
Rr580910 996 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs584996700
MGI SNP Detail		 Chr3:95221482 6330562C20Rik within coordinates of
Rr580910 936 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs242544651
MGI SNP Detail		 Chr3:95221526 6330562C20Rik within coordinates of
Rr580910 892 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs264797542
MGI SNP Detail		 Chr3:95221543 6330562C20Rik within coordinates of
Rr580910 875 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs232953469
MGI SNP Detail		 Chr3:95221591 6330562C20Rik within coordinates of
Rr580910 827 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs241246721
MGI SNP Detail		 Chr3:95221605 6330562C20Rik within coordinates of
Rr580910 813 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs256817300
MGI SNP Detail		 Chr3:95221611 6330562C20Rik within coordinates of
Rr580910 807 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227270050
MGI SNP Detail		 Chr3:95221625 6330562C20Rik within coordinates of
Rr580910 793 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs243779167
MGI SNP Detail		 Chr3:95221650 6330562C20Rik within coordinates of
Rr580910 768 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs214753110
MGI SNP Detail		 Chr3:95221651 6330562C20Rik within coordinates of
Rr580910 767 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs227967287
MGI SNP Detail
Alliance Variant		 Chr3:95222067 6330562C20Rik within coordinates of
Gm53243 mRNA-UTR
Rr580907 within coordinates of
Rr580910 351 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249792470
MGI SNP Detail
Alliance Variant		 Chr3:95222091 6330562C20Rik within coordinates of
Cers2 mRNA-UTR
Cpgi13508 within coordinates of
Gm53243 Coding-Synonymous
Rr580907 within coordinates of
Rr580910 327 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218317318
MGI SNP Detail
Alliance Variant		 Chr3:95222099 6330562C20Rik within coordinates of
Cers2 mRNA-UTR
Cpgi13508 within coordinates of
Gm53243 Coding-NonSynonymous
Rr580907 within coordinates of
Rr580910 319 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236607320
MGI SNP Detail
Alliance Variant		 Chr3:95222249 6330562C20Rik within coordinates of
Cers2 Intron
Cpgi13508 within coordinates of
Gm53243 Coding-NonSynonymous
Rr580907 within coordinates of
Rr580910 169 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs253031891
MGI SNP Detail
Alliance Variant		 Chr3:95222268 6330562C20Rik within coordinates of
Cers2 Intron
Cpgi13508 within coordinates of
Gm53243 Coding-Synonymous
Rr580907 within coordinates of
Rr580910 150 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G A A A G G G G G G G G G
rs215961726
MGI SNP Detail
Alliance Variant		 Chr3:95222297 6330562C20Rik within coordinates of
Cers2 Intron
Cpgi13508 within coordinates of
Gm53243 Coding-Synonymous
Rr580907 within coordinates of
Rr580910 121 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs231860175
MGI SNP Detail
Alliance Variant		 Chr3:95222304 6330562C20Rik within coordinates of
Cers2 Intron
Cpgi13508 within coordinates of
Gm53243 Coding-Synonymous
Rr580907 within coordinates of
Rr580910 114 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262654002
MGI SNP Detail
Alliance Variant		 Chr3:95222320 6330562C20Rik within coordinates of
Cers2 Intron
Cpgi13508 within coordinates of
Gm53243 Coding-NonSynonymous
Rr580907 within coordinates of
Rr580910 98 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs220958454
MGI SNP Detail
Alliance Variant		 Chr3:95222325 6330562C20Rik within coordinates of
Cers2 Intron
Cpgi13508 within coordinates of
Gm53243 Coding-Synonymous
Rr580907 within coordinates of
Rr580910 93 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs237470583
MGI SNP Detail
Alliance Variant		 Chr3:95222401 6330562C20Rik within coordinates of
Cers2 Intron
Cers2 mRNA-UTR
Cpgi13508 within coordinates of
Gm53243 Coding-NonSynonymous
Rr397837 within coordinates of
Rr580909 within coordinates of
Rr580910 17 bp proximal
Tssr34471 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs260515806
MGI SNP Detail
Alliance Variant		 Chr3:95222469 6330562C20Rik within coordinates of
Cers2 Intron
Cers2 mRNA-UTR
Cpgi13508 within coordinates of
Gm53243 Coding-Synonymous
Rr397837 within coordinates of
Rr580910 within coordinates of
Tssr34472 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs222988753
MGI SNP Detail
Alliance Variant		 Chr3:95222501 Cers2 Intron
Cers2 mRNA-UTR
Cpgi13508 within coordinates of
Gm53243 Coding-NonSynonymous
Rr397837 within coordinates of
Rr580910 within coordinates of
Tssr34472 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs241300133
MGI SNP Detail
Alliance Variant		 Chr3:95222502 Cers2 Intron
Cers2 mRNA-UTR
Cpgi13508 within coordinates of
Gm53243 Coding-Synonymous
Rr397837 within coordinates of
Rr580910 within coordinates of
Tssr34472 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs256995533
MGI SNP Detail
Alliance Variant		 Chr3:95222568 Cers2 Intron
Cers2 mRNA-UTR
Cpgi13508 within coordinates of
Gm53243 Coding-Synonymous
Rr397837 within coordinates of
Rr580910 within coordinates of
Tssr30538 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221142895
MGI SNP Detail
Alliance Variant		 Chr3:95222783 Cers2 Intron
Cers2 mRNA-UTR
Cpgi13508 within coordinates of
Gm53243 Coding-NonSynonymous
Rr580910 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs242783246
MGI SNP Detail
Alliance Variant		 Chr3:95222859 Cers2 Intron
Cpgi13508 within coordinates of
Gm53243 Coding-Synonymous
Rr580910 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265272910
MGI SNP Detail
Alliance Variant		 Chr3:95222918 Cers2 Intron
Cpgi13508 within coordinates of
Gm53243 Intron
Rr580910 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs227654980
MGI SNP Detail
Alliance Variant		 Chr3:95222977 Cers2 Intron
Cpgi13508 within coordinates of
Gm53243 Intron
Rr580910 59 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs52421880
MGI SNP Detail
Alliance Variant		 Chr3:95223015 Cers2 Intron
Cpgi13508 within coordinates of
Gm53243 Intron
Rr580910 97 bp distal
Rr580911 within coordinates of
 SNP C/T C T T T T T C T T T T T T T T T T T T T T T T C C T C T C T T T T T C C C T T T T T T T T
rs263936542
MGI SNP Detail
Alliance Variant		 Chr3:95223024 Cers2 Intron
Cpgi13508 within coordinates of
Gm53243 Intron
Rr580910 106 bp distal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs587189196
MGI SNP Detail
Alliance Variant		 Chr3:95223046 Cers2 Intron
Cpgi13508 within coordinates of
Gm53243 Intron
Rr580910 128 bp distal
Tssr34473 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs229137709
MGI SNP Detail
Alliance Variant		 Chr3:95223067 Cers2 Intron
Cpgi13508 within coordinates of
Gm53243 Splice-Site
Rr580910 149 bp distal
Tssr34473 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs246637204
MGI SNP Detail
Alliance Variant		 Chr3:95223104 Cers2 Intron
Cpgi13508 within coordinates of
Gm53243 Coding-NonSynonymous
Rr580910 186 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs216112345
MGI SNP Detail
Alliance Variant		 Chr3:95223120 Cers2 Intron
Cpgi13508 within coordinates of
Rr580910 202 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs231807606
MGI SNP Detail
Alliance Variant		 Chr3:95223154 Cers2 Intron
Rr580910 236 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs251637165
MGI SNP Detail
Alliance Variant		 Chr3:95223386 Cers2 Intron
Rr580910 468 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs212710649
MGI SNP Detail
Alliance Variant		 Chr3:95223387 Cers2 Intron
Rr580910 469 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235735834
MGI SNP Detail
Alliance Variant		 Chr3:95223523 Cers2 Intron
Rr580910 605 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263980574
MGI SNP Detail
Alliance Variant		 Chr3:95223598 Cers2 Intron
Rr580910 680 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs222949975
MGI SNP Detail
Alliance Variant		 Chr3:95223651 Cers2 Intron
Rr580910 733 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs233113602
MGI SNP Detail
Alliance Variant		 Chr3:95223652 Cers2 Intron
Rr580910 734 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs251008481
MGI SNP Detail
Alliance Variant		 Chr3:95223915 Cers2 Intron
Rr580910 997 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs221296381
MGI SNP Detail
Alliance Variant		 Chr3:95223951 Cers2 Intron
Rr580910 1033 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245578761
MGI SNP Detail
Alliance Variant		 Chr3:95224044 Cers2 Intron
Rr580910 1126 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs262634111
MGI SNP Detail
Alliance Variant		 Chr3:95224094 Cers2 Intron
Rr580910 1176 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs219707356
MGI SNP Detail
Alliance Variant		 Chr3:95224184 Cers2 Intron
Rr580910 1266 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs242103231
MGI SNP Detail
Alliance Variant		 Chr3:95224269 Cers2 Intron
Rr580910 1351 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs260629936
MGI SNP Detail
Alliance Variant		 Chr3:95224439 Cers2 Intron
Rr580910 1521 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229105779
MGI SNP Detail
Alliance Variant		 Chr3:95224467 Cers2 Intron
Rr580910 1549 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246375276
MGI SNP Detail
Alliance Variant		 Chr3:95224477 Cers2 Intron
Rr580910 1559 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260096588
MGI SNP Detail
Alliance Variant		 Chr3:95224526 Cers2 Intron
Rr580910 1608 bp distal
Rr580914 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs225994920
MGI SNP Detail
Alliance Variant		 Chr3:95224529 Cers2 Intron
Rr580910 1611 bp distal
Rr580914 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs256512864
MGI SNP Detail
Alliance Variant		 Chr3:95224628 Cers2 Intron
Rr580910 1710 bp distal
Rr580914 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212071956
MGI SNP Detail
Alliance Variant		 Chr3:95224636 Cers2 Intron
Rr580910 1718 bp distal
Rr580914 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs229351365
MGI SNP Detail
Alliance Variant		 Chr3:95224894 Cers2 Intron
Rr580910 1976 bp distal
Rr580914 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G
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Showing SNP(s) 1 - 81 of 81
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory
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