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Mouse SNP Summary
Symbol
Name
ID 		Rr581076
regulatory region 581076
MGI:8043208

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231587478
MGI SNP Detail
Alliance Variant		 Chr3:95798974 BC028528 Intron
BC028528 Noncoding-Transcript-Variant
Rr581074 within coordinates of
Rr581076 1817 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258139534
MGI SNP Detail
Alliance Variant		 Chr3:95799000 BC028528 Intron
BC028528 Noncoding-Transcript-Variant
Rr581074 within coordinates of
Rr581076 1791 bp proximal
 SNP C/T C C C C C C T T C C C C C C C C C C C C C C T C C C C T C C C T C C C T T C C T C C C T C C C C C C C
rs213613581
MGI SNP Detail
Alliance Variant		 Chr3:95799001 BC028528 Intron
BC028528 Noncoding-Transcript-Variant
Rr581074 within coordinates of
Rr581076 1790 bp proximal
 SNP A/C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G A G G G G
rs33147020
MGI SNP Detail
Alliance Variant		 Chr3:95799117 BC028528 Intron
BC028528 Noncoding-Transcript-Variant
Rr581074 within coordinates of
Rr581076 1674 bp proximal
 SNP A/C C C C C C C C C C C C C C A C
rs243672266
MGI SNP Detail
Alliance Variant		 Chr3:95799275 BC028528 Intron
BC028528 mRNA-UTR
BC028528 Noncoding-Transcript-Variant
Rr581075 within coordinates of
Rr581076 1516 bp proximal
Tssr34558 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs213013481
MGI SNP Detail
Alliance Variant		 Chr3:95799372 BC028528 Intron
BC028528 Noncoding-Transcript-Variant
Rr581075 within coordinates of
Rr581076 1419 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C
rs235605274
MGI SNP Detail
Alliance Variant		 Chr3:95799430 BC028528 Intron
Rr581075 within coordinates of
Rr581076 1361 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255307737
MGI SNP Detail
Alliance Variant		 Chr3:95799440 BC028528 Intron
Rr581075 within coordinates of
Rr581076 1351 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T
rs216702999
MGI SNP Detail
Alliance Variant		 Chr3:95799571 BC028528 Intron
Rr581075 within coordinates of
Rr581076 1220 bp proximal
 SNP A/C C C C C C C A A C C C C C C C C C C C C C C A C C C C A C C C C A C C C A A C C A C C C A C C C A C C C C
rs239058883
MGI SNP Detail
Alliance Variant		 Chr3:95799630 BC028528 Intron
Rr581075 within coordinates of
Rr581076 1161 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262172061
MGI SNP Detail
Alliance Variant		 Chr3:95799675 BC028528 Intron
Rr581075 within coordinates of
Rr581076 1116 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223748097
MGI SNP Detail
Alliance Variant		 Chr3:95799676 BC028528 Intron
Rr581075 within coordinates of
Rr581076 1115 bp proximal
 SNP A/G G G G G G G A A G G G G G G G G G G G G G G G G G G G G G G G G A G G G A A G G G G G G A G G G G G G G G
rs244321636
MGI SNP Detail
Alliance Variant		 Chr3:95799681 BC028528 Intron
Rr581075 within coordinates of
Rr581076 1110 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247984979
MGI SNP Detail
Alliance Variant		 Chr3:95799689 BC028528 Intron
Rr581075 within coordinates of
Rr581076 1102 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218424543
MGI SNP Detail
Alliance Variant		 Chr3:95799707 BC028528 Intron
Rr581075 within coordinates of
Rr581076 1084 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs240521079
MGI SNP Detail
Alliance Variant		 Chr3:95799750 BC028528 Intron
Rr581075 within coordinates of
Rr581076 1041 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs259523298
MGI SNP Detail
Alliance Variant		 Chr3:95799751 BC028528 Intron
Rr581075 within coordinates of
Rr581076 1040 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232154910
MGI SNP Detail
Alliance Variant		 Chr3:95799784 BC028528 Intron
Rr581075 within coordinates of
Rr581076 1007 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs246360925
MGI SNP Detail
Alliance Variant		 Chr3:95799888 BC028528 Intron
Rr581076 903 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs265047668
MGI SNP Detail
Alliance Variant		 Chr3:95799933 BC028528 Intron
Rr581076 858 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs230795540
MGI SNP Detail
Alliance Variant		 Chr3:95799999 BC028528 Intron
Rr581076 792 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243381669
MGI SNP Detail
Alliance Variant		 Chr3:95800024 BC028528 Intron
Rr581076 767 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256953797
MGI SNP Detail
Alliance Variant		 Chr3:95800026 BC028528 Intron
BC028528 Splice-Site
Rr581076 765 bp proximal
 SNP C/T T T T T T T C C T T T T T T T T T T T T T T C T T T T C T T T T C C T T C C T T C T T T C T T T C T T T T
rs228655513
MGI SNP Detail
Alliance Variant		 Chr3:95800126 BC028528 mRNA-UTR
Rr581076 665 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248925745
MGI SNP Detail		 Chr3:95800268 Rr581076 523 bp proximal
 SNP C/T C C C C T C C C C C C C C C C C C C C T C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs585060869
MGI SNP Detail		 Chr3:95800284 Rr581076 507 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C
rs579328777
MGI SNP Detail		 Chr3:95800294 Rr581076 497 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581884568
MGI SNP Detail		 Chr3:95800299 Rr581076 492 bp proximal
 SNP A/C A C A A A A A A A A A A C A A A A A A A A A
rs215795565
MGI SNP Detail		 Chr3:95800307 Rr581076 484 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241618480
MGI SNP Detail		 Chr3:95800383 Rr581076 408 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251091547
MGI SNP Detail		 Chr3:95800392 Rr581076 399 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs585517368
MGI SNP Detail		 Chr3:95800407 Rr581076 384 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs33147023
MGI SNP Detail		 Chr3:95800514 Rr581076 277 bp proximal
 SNP A/C A A C A C A A C
rs230248489
MGI SNP Detail		 Chr3:95800649 Rr581076 142 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs249116659
MGI SNP Detail		 Chr3:95800692 Rr581076 99 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs218494607
MGI SNP Detail		 Chr3:95800728 Rr581076 63 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs234079492
MGI SNP Detail		 Chr3:95801067 Cpgi13526 within coordinates of
Rr397845 within coordinates of
Rr581076 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs33147916
MGI SNP Detail		 Chr3:95801106 Cpgi13526 within coordinates of
Rr397845 within coordinates of
Rr581076 within coordinates of
 SNP A/T A A A T A A A A A A A
rs33147919
MGI SNP Detail		 Chr3:95801126 Cpgi13526 within coordinates of
Rr397845 within coordinates of
Rr581076 within coordinates of
 SNP A/T A A T A A T
rs248478692
MGI SNP Detail		 Chr3:95801173 Cpgi13526 within coordinates of
Rr397845 within coordinates of
Rr581076 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G
rs262366375
MGI SNP Detail		 Chr3:95801177 Cpgi13526 within coordinates of
Rr397845 within coordinates of
Rr581076 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223065402
MGI SNP Detail
Alliance Variant		 Chr3:95801234 Aph1a mRNA-UTR
Cpgi13526 within coordinates of
Rr397845 within coordinates of
Rr581076 within coordinates of
Tssr30653 within coordinates of
 SNP A/G A A A A A A G G A A A A A A A A A A A G A A G A A A A G G A A A G G A A G G A A G A A A G A A G A A A G
rs237111327
MGI SNP Detail
Alliance Variant		 Chr3:95801397 Aph1a mRNA-UTR
Rr581076 20 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs256658068
MGI SNP Detail
Alliance Variant		 Chr3:95801398 Aph1a mRNA-UTR
Rr581076 21 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228691008
MGI SNP Detail
Alliance Variant		 Chr3:95801443 Aph1a mRNA-UTR
Rr581076 66 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs248965596
MGI SNP Detail
Alliance Variant		 Chr3:95801466 Aph1a mRNA-UTR
Rr581076 89 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs265541888
MGI SNP Detail
Alliance Variant		 Chr3:95801646 Aph1a Intron
Cpgi13527 within coordinates of
Rr581076 269 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232476352
MGI SNP Detail
Alliance Variant		 Chr3:95801834 Aph1a Intron
Rr581076 457 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A
rs255283430
MGI SNP Detail
Alliance Variant		 Chr3:95802333 Aph1a Intron
Rr581076 956 bp distal
 SNP G/T G G G G G G T T G G G G G G G G G G G T G G T G G G G T T G G T T G G T T G G T G G G T G G T G G G G
rs215196388
MGI SNP Detail
Alliance Variant		 Chr3:95802337 Aph1a Intron
Rr581076 960 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230328280
MGI SNP Detail
Alliance Variant		 Chr3:95802354 Aph1a Intron
Rr581076 977 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243371456
MGI SNP Detail
Alliance Variant		 Chr3:95802397 Aph1a Intron
Rr581076 1020 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216899538
MGI SNP Detail
Alliance Variant		 Chr3:95802514 Aph1a Coding-NonSynonymous
Rr581076 1137 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234112924
MGI SNP Detail
Alliance Variant		 Chr3:95802604 Aph1a Intron
Rr581076 1227 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238359094
MGI SNP Detail
Alliance Variant		 Chr3:95802922 Aph1a Intron
Rr581076 1545 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261825401
MGI SNP Detail
Alliance Variant		 Chr3:95802971 Aph1a Intron
Rr581076 1594 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs220299892
MGI SNP Detail
Alliance Variant		 Chr3:95802987 Aph1a Intron
Rr581076 1610 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs237146996
MGI SNP Detail
Alliance Variant		 Chr3:95803011 Aph1a Intron
Rr581076 1634 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C
rs256696740
MGI SNP Detail
Alliance Variant		 Chr3:95803025 Aph1a Intron
Aph1a Splice-Site
Rr581076 1648 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222558119
MGI SNP Detail
Alliance Variant		 Chr3:95803202 Aph1a Intron
Rr581076 1825 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242622811
MGI SNP Detail
Alliance Variant		 Chr3:95803204 Aph1a Intron
Rr581076 1827 bp distal
 SNP C/T T T T T T T C C T T T T T T T T T T T C T T C T T T T C C T T T C C T T C C T T C T T C C T T T C T T T C
rs263270036
MGI SNP Detail
Alliance Variant		 Chr3:95803247 Aph1a Intron
Rr581076 1870 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233268176
MGI SNP Detail
Alliance Variant		 Chr3:95803289 Aph1a Intron
Rr581076 1912 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs243274899
MGI SNP Detail
Alliance Variant		 Chr3:95803301 Aph1a Intron
Rr581076 1924 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
<< first < prev1 next > last >>
Showing SNP(s) 1 - 64 of 64
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory