About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Rr581117
regulatory region 581117
MGI:8043249

<< first < prev1 next > last >>
Showing SNP(s) 1 - 69 of 69

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233424418
MGI SNP Detail
Alliance Variant		 Chr3:95902637 Cpgi13533 within coordinates of
Plekho1 Intron
Rr581117 1995 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G A A G G G G G G G G G G
rs249077921
MGI SNP Detail
Alliance Variant		 Chr3:95902738 Cpgi13533 within coordinates of
Plekho1 Intron
Rr581117 1894 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs259359177
MGI SNP Detail
Alliance Variant		 Chr3:95902843 Cpgi13533 within coordinates of
Plekho1 Coding-Synonymous
Plekho1 mRNA-UTR
Rr581116 within coordinates of
Rr581117 1789 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs227162918
MGI SNP Detail
Alliance Variant		 Chr3:95903004 Cpgi13533 within coordinates of
Plekho1 Coding-NonSynonymous
Plekho1 Intron
Rr581116 within coordinates of
Rr581117 1628 bp proximal
Tssr34579 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs228049978
MGI SNP Detail
Alliance Variant		 Chr3:95903016 Cpgi13533 within coordinates of
Plekho1 Coding-NonSynonymous
Plekho1 Intron
Rr581116 within coordinates of
Rr581117 1616 bp proximal
Tssr34580 within coordinates of
 SNP G/T T G
rs213408273
MGI SNP Detail
Alliance Variant		 Chr3:95903220 Cpgi13533 within coordinates of
Plekho1 mRNA-UTR
Rr581116 within coordinates of
Rr581117 1412 bp proximal
 SNP C/G G G C C G G C G C C C G G G G C G G G G G G C G G G G G G G G
rs238686594
MGI SNP Detail		 Chr3:95903346 Cpgi13533 within coordinates of
Gm9052 within coordinates of
Rr581116 within coordinates of
Rr581117 1286 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A
rs248809224
MGI SNP Detail		 Chr3:95903395 Cpgi13533 within coordinates of
Gm9052 within coordinates of
Rr581116 within coordinates of
Rr581117 1237 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs213263281
MGI SNP Detail		 Chr3:95903481 Cpgi13533 within coordinates of
Gm9052 within coordinates of
Rr581116 within coordinates of
Rr581117 1151 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234245717
MGI SNP Detail		 Chr3:95903533 Cpgi13533 within coordinates of
Gm9052 within coordinates of
Rr581116 within coordinates of
Rr581117 1099 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C C C T T C C C C C C C C C C
rs253103616
MGI SNP Detail		 Chr3:95903537 Cpgi13533 within coordinates of
Gm9052 within coordinates of
Rr581116 within coordinates of
Rr581117 1095 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220619405
MGI SNP Detail		 Chr3:95903578 Cpgi13533 within coordinates of
Gm9052 within coordinates of
Rr581116 within coordinates of
Rr581117 1054 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233769942
MGI SNP Detail		 Chr3:95903908 Rr581117 724 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A
rs262106908
MGI SNP Detail		 Chr3:95904047 Rr581117 585 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs46199977
MGI SNP Detail		 Chr3:95904259 Rr581117 373 bp proximal
 SNP C/T C T T C
rs244123180
MGI SNP Detail		 Chr3:95904362 Rr581117 270 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261969560
MGI SNP Detail		 Chr3:95904494 Gm65578 within coordinates of
Rr581117 138 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs226667001
MGI SNP Detail		 Chr3:95904546 Gm65578 within coordinates of
Rr581117 86 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs243104458
MGI SNP Detail		 Chr3:95904681 Rr581117 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259420749
MGI SNP Detail		 Chr3:95904684 Rr581117 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228251256
MGI SNP Detail		 Chr3:95904732 Rr581117 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs241106134
MGI SNP Detail		 Chr3:95904742 Rr581117 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265014748
MGI SNP Detail		 Chr3:95904752 Rr581117 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230677580
MGI SNP Detail		 Chr3:95904813 Rr581117 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs252042640
MGI SNP Detail		 Chr3:95904850 Rr581117 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212480792
MGI SNP Detail		 Chr3:95904954 Rr581117 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs228419055
MGI SNP Detail		 Chr3:95904996 Rr581117 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T A T T T T T T T A T T T T
rs247408522
MGI SNP Detail		 Chr3:95905024 Rr581117 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215103204
MGI SNP Detail		 Chr3:95905065 Rr581117 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs233469588
MGI SNP Detail		 Chr3:95905161 Rr581117 29 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256917188
MGI SNP Detail		 Chr3:95905221 Rr581117 89 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs215397991
MGI SNP Detail		 Chr3:95905222 Rr581117 90 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A G A A A A A A G A A A A A A A A A A A A
rs579125393
MGI SNP Detail		 Chr3:95905324 Rr581117 192 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs31547836
MGI SNP Detail		 Chr3:95905375 Rr581117 243 bp distal
 SNP A/T T A
rs234819616
MGI SNP Detail		 Chr3:95905451 Rr581117 319 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs261627335
MGI SNP Detail		 Chr3:95905499 Rr581117 367 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs222728146
MGI SNP Detail		 Chr3:95905504 Rr581117 372 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs243161809
MGI SNP Detail		 Chr3:95905596 Rr581117 464 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs253214505
MGI SNP Detail		 Chr3:95905748 Rr581117 616 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs222190565
MGI SNP Detail		 Chr3:95905783 Rr581117 651 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246304393
MGI SNP Detail		 Chr3:95905848 Rr581117 716 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs262894694
MGI SNP Detail		 Chr3:95905865 Rr581117 733 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33151000
MGI SNP Detail		 Chr3:95905867 Rr581117 735 bp distal
 SNP A/T T A
rs240884187
MGI SNP Detail		 Chr3:95905914 Rr581117 782 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs264788398
MGI SNP Detail		 Chr3:95905952 Rr581117 820 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A C A A A A A A C C A A A A A A A A A A
rs227987607
MGI SNP Detail		 Chr3:95905961 Rr581117 829 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs247094459
MGI SNP Detail		 Chr3:95906021 Rr581117 889 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215164475
MGI SNP Detail		 Chr3:95906042 Rr581117 910 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30149424
MGI SNP Detail		 Chr3:95906069 Rr581117 937 bp distal
 SNP A/T T T T A A A T
rs255111980
MGI SNP Detail		 Chr3:95906075 Rr581117 943 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214606225
MGI SNP Detail		 Chr3:95906135 Rr581117 1003 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T
rs33151003
MGI SNP Detail		 Chr3:95906226 Rr581117 1094 bp distal
 SNP A/G G G A
rs256453265
MGI SNP Detail		 Chr3:95906385 Rr581117 1253 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216787511
MGI SNP Detail		 Chr3:95906450 Rr581117 1318 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs236470725
MGI SNP Detail		 Chr3:95906469 Rr581117 1337 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6215282
MGI SNP Detail		 Chr3:95906558 Rr581117 1426 bp distal
 SNP C/T C T
rs6228397
MGI SNP Detail		 Chr3:95906572 Rr581117 1440 bp distal
 SNP C/T T C
rs6228399
MGI SNP Detail		 Chr3:95906574 Rr581117 1442 bp distal
 SNP A/G A G
rs6228407
MGI SNP Detail		 Chr3:95906583 Rr581117 1451 bp distal
 SNP C/T T C
rs220779273
MGI SNP Detail		 Chr3:95906710 Rr581117 1578 bp distal
Rr581118 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243772627
MGI SNP Detail		 Chr3:95906758 Rr581117 1626 bp distal
Rr581118 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs6229592
MGI SNP Detail		 Chr3:95906803 Rr581117 1671 bp distal
Rr581118 within coordinates of
 SNP C/T T C
rs6230144
MGI SNP Detail		 Chr3:95906885 Rr581117 1753 bp distal
Rr581118 within coordinates of
 SNP C/T C T
rs221784063
MGI SNP Detail		 Chr3:95906931 Rr581117 1799 bp distal
Rr581118 within coordinates of
 SNP A/G G G G G G G A A G G G G G G G G G G G G G G G G G G G G G A G G A G G G A A G G G G G G A G G G G G G G G
rs6230254
MGI SNP Detail		 Chr3:95906953 Rr581117 1821 bp distal
Rr581118 within coordinates of
 SNP A/G A A G G
rs47696311
MGI SNP Detail		 Chr3:95906973 Rr581117 1841 bp distal
Rr581118 within coordinates of
 SNP G/T G T T
rs256825028
MGI SNP Detail		 Chr3:95907051 Rr581117 1919 bp distal
Rr581118 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs33151848
MGI SNP Detail		 Chr3:95907106 Rr581117 1974 bp distal
Rr581118 within coordinates of
 SNP A/G A A G
rs250664537
MGI SNP Detail		 Chr3:95907120 Rr581117 1988 bp distal
Rr581118 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
<< first < prev1 next > last >>
Showing SNP(s) 1 - 69 of 69
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory