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Mouse SNP Summary
Symbol
Name
ID 		Rr582475
regulatory region 582475
MGI:8044607

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Showing SNP(s) 1 - 47 of 47

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231949600
MGI SNP Detail
Alliance Variant		 Chr3:104124614 Magi3 Intron
Rr582475 1871 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs249330450
MGI SNP Detail
Alliance Variant		 Chr3:104124740 Magi3 Intron
Rr582475 1745 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221182092
MGI SNP Detail
Alliance Variant		 Chr3:104124812 Magi3 Intron
Rr582475 1673 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232820938
MGI SNP Detail
Alliance Variant		 Chr3:104125027 Magi3 Intron
Rr582475 1458 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260902056
MGI SNP Detail
Alliance Variant		 Chr3:104125030 Magi3 Intron
Rr582475 1455 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs226015362
MGI SNP Detail
Alliance Variant		 Chr3:104125233 Magi3 Intron
Rr582475 1252 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259342322
MGI SNP Detail
Alliance Variant		 Chr3:104125316 Magi3 Intron
Rr582475 1169 bp proximal
 SNP C/G C G
rs264613158
MGI SNP Detail
Alliance Variant		 Chr3:104125433 Magi3 Intron
Rr582475 1052 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220401694
MGI SNP Detail
Alliance Variant		 Chr3:104125710 Magi3 Intron
Rr582475 775 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239086886
MGI SNP Detail
Alliance Variant		 Chr3:104125861 Magi3 Intron
Rr582475 624 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581653901
MGI SNP Detail
Alliance Variant		 Chr3:104125919 Magi3 Intron
Rr582475 566 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213058215
MGI SNP Detail
Alliance Variant		 Chr3:104125924 Magi3 Intron
Rr582475 561 bp proximal
 SNP A/G G A
rs260534428
MGI SNP Detail
Alliance Variant		 Chr3:104125965 Magi3 Intron
Rr582475 520 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264229440
MGI SNP Detail
Alliance Variant		 Chr3:104126122 Magi3 Intron
Rr582475 363 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249341178
MGI SNP Detail
Alliance Variant		 Chr3:104126230 Magi3 Intron
Rr582475 255 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs215494638
MGI SNP Detail
Alliance Variant		 Chr3:104126287 Magi3 Intron
Rr582475 198 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225857255
MGI SNP Detail
Alliance Variant		 Chr3:104126306 Magi3 Intron
Rr582475 179 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs243644353
MGI SNP Detail
Alliance Variant		 Chr3:104126470 Magi3 Intron
Rr582475 15 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs215622173
MGI SNP Detail
Alliance Variant		 Chr3:104126519 Magi3 Intron
Rr582475 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs232588026
MGI SNP Detail
Alliance Variant		 Chr3:104126608 Cpgi13643 within coordinates of
Magi3 Intron
Rr582475 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs264195066
MGI SNP Detail
Alliance Variant		 Chr3:104126622 Cpgi13643 within coordinates of
Magi3 Intron
Rr582475 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217925811
MGI SNP Detail
Alliance Variant		 Chr3:104126817 Cpgi13643 within coordinates of
Magi3 Intron
Rr582475 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs237253985
MGI SNP Detail
Alliance Variant		 Chr3:104126953 Cpgi13643 within coordinates of
Magi3 Intron
Magi3 Splice-Site
Rr582475 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255343985
MGI SNP Detail
Alliance Variant		 Chr3:104127297 Cpgi13643 within coordinates of
Gm66179 within coordinates of
Magi3 mRNA-UTR
Rr582475 312 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs220203880
MGI SNP Detail
Alliance Variant		 Chr3:104127334 Cpgi13643 within coordinates of
Gm66179 within coordinates of
Magi3 mRNA-UTR
Rr582475 349 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs584872923
MGI SNP Detail
Alliance Variant		 Chr3:104127420 Cpgi13643 within coordinates of
Gm66179 within coordinates of
Magi3 mRNA-UTR
Rr582475 435 bp distal
Rr582476 within coordinates of
 SNP A/G G G G G A A G G G G G G G A G G G G G A A G A A G A A G G G G
rs239072724
MGI SNP Detail
Alliance Variant		 Chr3:104127517 Cpgi13643 within coordinates of
Gm66179 within coordinates of
Magi3 mRNA-UTR
Rr582475 532 bp distal
Rr582476 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs578934847
MGI SNP Detail
Alliance Variant		 Chr3:104127591 Cpgi13643 within coordinates of
Gm66179 within coordinates of
Magi3 mRNA-UTR
Rr582475 606 bp distal
Rr582476 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs582655576
MGI SNP Detail
Alliance Variant		 Chr3:104127592 Cpgi13643 within coordinates of
Gm66179 within coordinates of
Magi3 mRNA-UTR
Rr582475 607 bp distal
Rr582476 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs584611793
MGI SNP Detail
Alliance Variant		 Chr3:104127593 Cpgi13643 within coordinates of
Gm66179 within coordinates of
Magi3 mRNA-UTR
Rr582475 608 bp distal
Rr582476 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs253796104
MGI SNP Detail
Alliance Variant		 Chr3:104127623 Cpgi13643 within coordinates of
Gm66179 within coordinates of
Magi3 mRNA-UTR
Rr582475 638 bp distal
Rr582476 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs221076307
MGI SNP Detail		 Chr3:104127774 Cpgi13643 within coordinates of
Gm66179 within coordinates of
Rr397911 within coordinates of
Rr582475 789 bp distal
Rr582476 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs236333010
MGI SNP Detail		 Chr3:104127787 Cpgi13643 within coordinates of
Gm66179 within coordinates of
Rr397911 within coordinates of
Rr582475 802 bp distal
Rr582476 within coordinates of
 SNP C/T C T
rs265950868
MGI SNP Detail		 Chr3:104127801 Cpgi13643 within coordinates of
Gm66179 within coordinates of
Rr397911 within coordinates of
Rr582475 816 bp distal
Rr582476 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229225956
MGI SNP Detail		 Chr3:104127837 Cpgi13643 within coordinates of
Gm66179 within coordinates of
Rr397911 within coordinates of
Rr582475 852 bp distal
Rr582476 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244501184
MGI SNP Detail		 Chr3:104127867 Cpgi13643 within coordinates of
Gm66179 within coordinates of
Rr397911 within coordinates of
Rr582475 882 bp distal
Rr582476 within coordinates of
 SNP A/G A G A G G G G A G G G G G A A A A G G G G G A A G A A G G G A G G G G G A G A G G A G G G A G G
rs256615174
MGI SNP Detail		 Chr3:104127901 Cpgi13643 within coordinates of
Gm66179 within coordinates of
Rr397911 within coordinates of
Rr582475 916 bp distal
Rr582476 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225644475
MGI SNP Detail		 Chr3:104127991 2010002M09Rik within coordinates of
Cpgi13643 within coordinates of
Gm66179 within coordinates of
Rr582475 1006 bp distal
Rr582477 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs243593137
MGI SNP Detail		 Chr3:104128014 2010002M09Rik within coordinates of
Cpgi13643 within coordinates of
Gm66179 within coordinates of
Rr582475 1029 bp distal
Rr582477 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215745345
MGI SNP Detail		 Chr3:104128050 2010002M09Rik within coordinates of
Cpgi13643 within coordinates of
Gm66179 within coordinates of
Rr582475 1065 bp distal
Rr582477 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs226644672
MGI SNP Detail		 Chr3:104128150 2010002M09Rik within coordinates of
Cpgi13643 within coordinates of
Gm66179 within coordinates of
Rr582475 1165 bp distal
Rr582477 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244634660
MGI SNP Detail		 Chr3:104128272 2010002M09Rik within coordinates of
Cpgi13643 within coordinates of
Gm66179 within coordinates of
Rr582475 1287 bp distal
Rr582477 within coordinates of
 SNP A/G G A
rs217722234
MGI SNP Detail		 Chr3:104128301 2010002M09Rik within coordinates of
Cpgi13643 within coordinates of
Gm66179 within coordinates of
Rr582475 1316 bp distal
Rr582477 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235426938
MGI SNP Detail		 Chr3:104128473 2010002M09Rik within coordinates of
Gm66179 within coordinates of
Rr582475 1488 bp distal
Rr582477 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260910483
MGI SNP Detail		 Chr3:104128565 2010002M09Rik within coordinates of
Gm66179 within coordinates of
Rr582475 1580 bp distal
Rr582477 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214256183
MGI SNP Detail		 Chr3:104128733 2010002M09Rik within coordinates of
Gm66179 within coordinates of
Rr582475 1748 bp distal
Rr582477 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231614523
MGI SNP Detail		 Chr3:104128756 2010002M09Rik within coordinates of
Gm66179 within coordinates of
Rr582475 1771 bp distal
Rr582477 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 47 of 47
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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