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Mouse SNP Summary
Symbol
Name
ID 		Rr582560
regulatory region 582560
MGI:8044692

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Showing SNP(s) 1 - 57 of 57

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246543971
MGI SNP Detail		 Chr3:104544581 Rr582556 within coordinates of
Rr582560 1949 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T C C C C C C C C C C C C C C
rs262198554
MGI SNP Detail		 Chr3:104544710 Gm65697 within coordinates of
Rr582556 within coordinates of
Rr582560 1820 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581286349
MGI SNP Detail		 Chr3:104544746 Gm65697 within coordinates of
Rr582556 within coordinates of
Rr582560 1784 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs225188485
MGI SNP Detail		 Chr3:104544767 Gm65697 within coordinates of
Rr582556 within coordinates of
Rr582560 1763 bp proximal
 SNP A/G A A A G G G G G A A G G G G G G A A A A G G G G G A G G A G G A A A G A A G G G G A G G A G A G G G A G
rs245135253
MGI SNP Detail		 Chr3:104544920 Gm65697 within coordinates of
Rr582556 within coordinates of
Rr582560 1610 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs586637367
MGI SNP Detail		 Chr3:104545006 Gm65697 within coordinates of
Rr582556 within coordinates of
Rr582560 1524 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs261188452
MGI SNP Detail		 Chr3:104545013 Gm65697 within coordinates of
Rr582556 within coordinates of
Rr582560 1517 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs228456339
MGI SNP Detail		 Chr3:104545158 Gm65697 within coordinates of
Rr582556 within coordinates of
Rr582560 1372 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G G T T T T T T T T T T T T T T
rs244142332
MGI SNP Detail		 Chr3:104545309 Cpgi13645 within coordinates of
Gm65697 within coordinates of
Rr582556 within coordinates of
Rr582560 1221 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs256214018
MGI SNP Detail		 Chr3:104545379 Cpgi13645 within coordinates of
Gm65697 within coordinates of
Rr582556 within coordinates of
Rr582560 1151 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs231070265
MGI SNP Detail		 Chr3:104545597 Cpgi13645 within coordinates of
Gm65697 within coordinates of
Rr582556 within coordinates of
Rr582560 933 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C A C
rs6367640
MGI SNP Detail		 Chr3:104545632 Cpgi13645 within coordinates of
Gm65697 within coordinates of
Rr367518 within coordinates of
Rr582556 within coordinates of
Rr582560 898 bp proximal
 SNP C/G C G
rs216720929
MGI SNP Detail		 Chr3:104545863 Cpgi13645 within coordinates of
Rr582557 within coordinates of
Rr582560 667 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240468071
MGI SNP Detail
Alliance Variant		 Chr3:104546016 Cpgi13645 within coordinates of
Rr582559 within coordinates of
Rr582560 514 bp proximal
Slc16a1 mRNA-UTR
 SNP C/G C C C G G G G G C C G G G G G G C C C G G G G G G C G G C G C C G G C C C C G G C G G C G C G G C G G
rs247763336
MGI SNP Detail
Alliance Variant		 Chr3:104546035 Cpgi13645 within coordinates of
Rr582559 within coordinates of
Rr582560 495 bp proximal
Slc16a1 mRNA-UTR
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs216996680
MGI SNP Detail
Alliance Variant		 Chr3:104546097 Cpgi13645 within coordinates of
Rr582559 within coordinates of
Rr582560 433 bp proximal
Slc16a1 mRNA-UTR
 SNP G/T T T G G G G G T T G G G G G T T T G G G G G G T G G T G G T T G G T T T T G G T G G T G T G G G T G G
rs230989405
MGI SNP Detail
Alliance Variant		 Chr3:104546098 Cpgi13645 within coordinates of
Rr582559 within coordinates of
Rr582560 432 bp proximal
Slc16a1 mRNA-UTR
 SNP A/C A A C C C C C A A C C C C C C A A A C C C C C C A C C A C C A A C C A A A A C C A C C A C A C C C A C C
rs248426000
MGI SNP Detail
Alliance Variant		 Chr3:104546163 Cpgi13645 within coordinates of
Rr582559 within coordinates of
Rr582560 367 bp proximal
Slc16a1 Intron
 SNP A/G A A G G G G G A A G G G G G A A A G G G G G G A G G A G G A A G G A A A A G G A G G A G A G G G A G
rs30504048
MGI SNP Detail
Alliance Variant		 Chr3:104546260 Cpgi13645 within coordinates of
Rr582559 within coordinates of
Rr582560 270 bp proximal
Slc16a1 Intron
 SNP C/G G G C C
rs236723167
MGI SNP Detail
Alliance Variant		 Chr3:104546263 Cpgi13645 within coordinates of
Rr582559 within coordinates of
Rr582560 267 bp proximal
Slc16a1 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs261830463
MGI SNP Detail
Alliance Variant		 Chr3:104546341 Cpgi13645 within coordinates of
Rr582559 within coordinates of
Rr582560 189 bp proximal
Slc16a1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224629690
MGI SNP Detail
Alliance Variant		 Chr3:104546396 Cpgi13645 within coordinates of
Rr582559 within coordinates of
Rr582560 134 bp proximal
Slc16a1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs247788031
MGI SNP Detail
Alliance Variant		 Chr3:104546675 Cpgi13645 within coordinates of
Rr582559 within coordinates of
Rr582560 124 bp distal
Slc16a1 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs30153174
MGI SNP Detail
Alliance Variant		 Chr3:104546680 Cpgi13645 within coordinates of
Rr582559 within coordinates of
Rr582560 129 bp distal
Slc16a1 Intron
 SNP A/G G G A A A
rs30414257
MGI SNP Detail
Alliance Variant		 Chr3:104546762 Cpgi13645 within coordinates of
Rr582559 within coordinates of
Rr582560 211 bp distal
Slc16a1 Intron
 SNP C/T T T C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237985022
MGI SNP Detail
Alliance Variant		 Chr3:104546791 Cpgi13645 within coordinates of
Rr582559 within coordinates of
Rr582560 240 bp distal
Slc16a1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255903612
MGI SNP Detail
Alliance Variant		 Chr3:104546799 Cpgi13645 within coordinates of
Rr582559 within coordinates of
Rr582560 248 bp distal
Slc16a1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231386889
MGI SNP Detail
Alliance Variant		 Chr3:104546815 Cpgi13645 within coordinates of
Rr582559 within coordinates of
Rr582560 264 bp distal
Slc16a1 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250854033
MGI SNP Detail
Alliance Variant		 Chr3:104546844 Cpgi13645 within coordinates of
Rr582559 within coordinates of
Rr582560 293 bp distal
Slc16a1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs30798728
MGI SNP Detail
Alliance Variant		 Chr3:104547006 Rr582559 within coordinates of
Rr582560 455 bp distal
Slc16a1 Intron
 SNP C/T T C C C
rs231756642
MGI SNP Detail
Alliance Variant		 Chr3:104547190 Rr582559 within coordinates of
Rr582560 639 bp distal
Slc16a1 Intron
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A
rs31099865
MGI SNP Detail
Alliance Variant		 Chr3:104547202 Rr582559 within coordinates of
Rr582560 651 bp distal
Slc16a1 Intron
 SNP C/T C T T T
rs217051840
MGI SNP Detail
Alliance Variant		 Chr3:104547239 Rr582559 within coordinates of
Rr582560 688 bp distal
Slc16a1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs31328051
MGI SNP Detail
Alliance Variant		 Chr3:104547278 Rr582559 within coordinates of
Rr582560 727 bp distal
Slc16a1 Intron
 SNP C/G G C C C
rs242584605
MGI SNP Detail
Alliance Variant		 Chr3:104547319 Rr582559 within coordinates of
Rr582560 768 bp distal
Slc16a1 Intron
 SNP C/T C C C T T T T T C C T T T T T T C C C C T T C T T C T C C T T C C C T C C C C T C C T T C T C T C T C T T
rs581771915
MGI SNP Detail
Alliance Variant		 Chr3:104547387 Rr582560 836 bp distal
Slc16a1 Intron
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C C G C C C C C C C C C C C C
rs386973562
MGI SNP Detail
Alliance Variant		 Chr3:104547398 Rr582560 847 bp distal
Slc16a1 Intron
 SNP A/G G G G A A A A G G A A A A G G G G A A G A A G A G A G G G A G G G G A G A A G A G A G A G G
rs108524198
MGI SNP Detail
Alliance Variant		 Chr3:104547425 Rr582560 874 bp distal
Slc16a1 Intron
 SNP A/T T A A T
rs215015697
MGI SNP Detail
Alliance Variant		 Chr3:104547500 Rr582560 949 bp distal
Slc16a1 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238844028
MGI SNP Detail
Alliance Variant		 Chr3:104547506 Rr582560 955 bp distal
Slc16a1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs256828941
MGI SNP Detail
Alliance Variant		 Chr3:104547507 Rr582560 956 bp distal
Slc16a1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs224886281
MGI SNP Detail
Alliance Variant		 Chr3:104547545 Rr582560 994 bp distal
Slc16a1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs233503837
MGI SNP Detail
Alliance Variant		 Chr3:104547600 Rr582560 1049 bp distal
Slc16a1 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254924337
MGI SNP Detail
Alliance Variant		 Chr3:104547615 Rr582560 1064 bp distal
Slc16a1 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222687851
MGI SNP Detail
Alliance Variant		 Chr3:104547763 Rr582560 1212 bp distal
Slc16a1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs237991931
MGI SNP Detail
Alliance Variant		 Chr3:104547783 Rr582560 1232 bp distal
Slc16a1 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs249507012
MGI SNP Detail
Alliance Variant		 Chr3:104547815 Rr582560 1264 bp distal
Slc16a1 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs223207360
MGI SNP Detail
Alliance Variant		 Chr3:104547979 Rr582560 1428 bp distal
Slc16a1 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245799728
MGI SNP Detail
Alliance Variant		 Chr3:104548012 Rr582560 1461 bp distal
Slc16a1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs263733078
MGI SNP Detail
Alliance Variant		 Chr3:104548069 Rr582560 1518 bp distal
Slc16a1 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232348708
MGI SNP Detail
Alliance Variant		 Chr3:104548194 Rr582560 1643 bp distal
Slc16a1 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241673018
MGI SNP Detail
Alliance Variant		 Chr3:104548251 Rr582560 1700 bp distal
Rr582561 within coordinates of
Slc16a1 Intron
 SNP A/G A A A G G G G G A A G G G G G G A A A G G A G G A G A A G G A A G A A A A G A A G G A G A G G A G G
rs259045162
MGI SNP Detail
Alliance Variant		 Chr3:104548281 Rr582560 1730 bp distal
Rr582561 within coordinates of
Slc16a1 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs33587502
MGI SNP Detail
Alliance Variant		 Chr3:104548358 Rr582560 1807 bp distal
Rr582561 within coordinates of
Slc16a1 Intron
 SNP C/T C C C C C C C C C C C C T C
rs242639868
MGI SNP Detail
Alliance Variant		 Chr3:104548394 Rr582560 1843 bp distal
Rr582561 within coordinates of
Slc16a1 Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A
rs33588295
MGI SNP Detail
Alliance Variant		 Chr3:104548410 Rr582560 1859 bp distal
Rr582561 within coordinates of
Slc16a1 Intron
 SNP C/T C T T T C T T T C T C T T
rs33588297
MGI SNP Detail
Alliance Variant		 Chr3:104548417 Rr582560 1866 bp distal
Rr582561 within coordinates of
Slc16a1 Intron
 SNP A/C C A A A A C A C A C
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Showing SNP(s) 1 - 57 of 57
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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