About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Rr582852
regulatory region 582852
MGI:8044984

<< first < prev1 next > last >>
Showing SNP(s) 1 - 92 of 92

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240856994
MGI SNP Detail
Alliance Variant
Chr3:106420427 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1932 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs251121273
MGI SNP Detail
Alliance Variant
Chr3:106420434 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1925 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs222425361
MGI SNP Detail
Alliance Variant
Chr3:106420555 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1804 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581887735
MGI SNP Detail
Alliance Variant
Chr3:106420601 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1758 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T C T T T C C C T T T T T C T T T T T T T T
rs234098220
MGI SNP Detail
Alliance Variant
Chr3:106420665 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1694 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33724199
MGI SNP Detail
Alliance Variant
Chr3:106420680 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1679 bp proximal
SNP C/T C C C C C C C T T C
rs219678961
MGI SNP Detail
Alliance Variant
Chr3:106420755 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1604 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243786356
MGI SNP Detail
Alliance Variant
Chr3:106420796 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1563 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C T T T C C C C C T C C C C C C C C
rs265170493
MGI SNP Detail
Alliance Variant
Chr3:106420805 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1554 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225339369
MGI SNP Detail
Alliance Variant
Chr3:106420859 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1500 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs248183458
MGI SNP Detail
Alliance Variant
Chr3:106420867 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1492 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs261498565
MGI SNP Detail
Alliance Variant
Chr3:106420870 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1489 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs228636439
MGI SNP Detail
Alliance Variant
Chr3:106420873 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1486 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs244421106
MGI SNP Detail
Alliance Variant
Chr3:106420874 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1485 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A G G A A A A A A G A A A G A A A A
rs256219637
MGI SNP Detail
Alliance Variant
Chr3:106420913 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1446 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs231248038
MGI SNP Detail
Alliance Variant
Chr3:106420917 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1442 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs250827939
MGI SNP Detail
Alliance Variant
Chr3:106420932 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1427 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs214112455
MGI SNP Detail
Alliance Variant
Chr3:106420943 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1416 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs238668754
MGI SNP Detail
Alliance Variant
Chr3:106420953 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1406 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245124969
MGI SNP Detail
Alliance Variant
Chr3:106420971 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1388 bp proximal
SNP A/G/T A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A G A A A G G G A A A A A G A A A T A A A A
rs217218335
MGI SNP Detail
Alliance Variant
Chr3:106420999 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1360 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs234215529
MGI SNP Detail
Alliance Variant
Chr3:106421030 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1329 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248685304
MGI SNP Detail
Alliance Variant
Chr3:106421041 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1318 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220153452
MGI SNP Detail
Alliance Variant
Chr3:106421047 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1312 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs238644097
MGI SNP Detail
Alliance Variant
Chr3:106421083 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1276 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256780340
MGI SNP Detail
Alliance Variant
Chr3:106421099 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1260 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225618752
MGI SNP Detail
Alliance Variant
Chr3:106421191 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1168 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579206505
MGI SNP Detail
Alliance Variant
Chr3:106421235 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1124 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs240912401
MGI SNP Detail
Alliance Variant
Chr3:106421275 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1084 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs261580198
MGI SNP Detail
Alliance Variant
Chr3:106421306 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1053 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222946576
MGI SNP Detail
Alliance Variant
Chr3:106421345 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1014 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs238385034
MGI SNP Detail
Alliance Variant
Chr3:106421443 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 916 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256184821
MGI SNP Detail
Alliance Variant
Chr3:106421477 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 882 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231077352
MGI SNP Detail
Alliance Variant
Chr3:106421482 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 877 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs33724202
MGI SNP Detail
Alliance Variant
Chr3:106422193 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 166 bp proximal
SNP A/G A A A A A A A A G A
rs33724935
MGI SNP Detail
Alliance Variant
Chr3:106422255 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 104 bp proximal
SNP A/G A A A A A A A A A G A
rs582411455
MGI SNP Detail
Alliance Variant
Chr3:106422284 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 75 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233028301
MGI SNP Detail
Alliance Variant
Chr3:106422340 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 19 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs245228552
MGI SNP Detail
Alliance Variant
Chr3:106422347 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 12 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs217329520
MGI SNP Detail
Alliance Variant
Chr3:106422380 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G C G G G G G G G C G G G G
rs33724938
MGI SNP Detail
Alliance Variant
Chr3:106422385 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 within coordinates of
SNP A/T T T T T T T T T A T
rs228241616
MGI SNP Detail
Alliance Variant
Chr3:106422453 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs242963865
MGI SNP Detail
Alliance Variant
Chr3:106422548 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs211856824
MGI SNP Detail
Alliance Variant
Chr3:106422580 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236785282
MGI SNP Detail
Alliance Variant
Chr3:106422597 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261816345
MGI SNP Detail
Alliance Variant
Chr3:106422684 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 51 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs33724941
MGI SNP Detail
Alliance Variant
Chr3:106422733 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 100 bp distal
SNP A/G A A A A A A A G A
rs233510632
MGI SNP Detail
Alliance Variant
Chr3:106422760 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 127 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs255610197
MGI SNP Detail
Alliance Variant
Chr3:106422850 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 217 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs223110453
MGI SNP Detail
Alliance Variant
Chr3:106422856 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 223 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A C A A A A C A A A C A A C C C A C A A A C A A C A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238291250
MGI SNP Detail
Alliance Variant
Chr3:106422873 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 240 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs255769155
MGI SNP Detail
Alliance Variant
Chr3:106422906 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 273 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs223308576
MGI SNP Detail
Alliance Variant
Chr3:106422925 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 292 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T C T T T T T C T T T T
rs243372087
MGI SNP Detail
Alliance Variant
Chr3:106422967 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 334 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A T A A A A A T A A A A
rs33725744
MGI SNP Detail
Alliance Variant
Chr3:106423012 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 379 bp distal
SNP A/G G G G G G G G G G A G
rs33710894
MGI SNP Detail
Alliance Variant
Chr3:106423051 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 418 bp distal
SNP C/G C C C C C C C C C G C
rs33710897
MGI SNP Detail
Alliance Variant
Chr3:106423084 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 451 bp distal
SNP A/C A A A A A A A A C A A
rs33710900
MGI SNP Detail
Alliance Variant
Chr3:106423102 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 469 bp distal
SNP A/G G G G G G G G A G
rs228396882
MGI SNP Detail
Alliance Variant
Chr3:106423223 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 590 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs242926586
MGI SNP Detail
Alliance Variant
Chr3:106423246 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 613 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs211957569
MGI SNP Detail
Alliance Variant
Chr3:106423265 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 632 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C T C C T T C C T T T C T C C C T C C C T C C C C
rs585905012
MGI SNP Detail
Alliance Variant
Chr3:106423316 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 683 bp distal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs31440539
MGI SNP Detail
Alliance Variant
Chr3:106423323 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 690 bp distal
SNP C/T C T C T C
rs31692265
MGI SNP Detail
Alliance Variant
Chr3:106423325 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 692 bp distal
SNP C/T T C T C C T
rs579979553
MGI SNP Detail
Alliance Variant
Chr3:106423348 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 715 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A
rs52184268
MGI SNP Detail
Alliance Variant
Chr3:106423354 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 721 bp distal
SNP G G
rs582401417
MGI SNP Detail
Alliance Variant
Chr3:106423386 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 753 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs231055961
MGI SNP Detail
Alliance Variant
Chr3:106423504 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 871 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs250462463
MGI SNP Detail
Alliance Variant
Chr3:106423546 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 913 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs33710903
MGI SNP Detail
Alliance Variant
Chr3:106423707 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1074 bp distal
SNP C/T T T T T T T C T
rs33711636
MGI SNP Detail
Alliance Variant
Chr3:106423785 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1152 bp distal
SNP G/T T T T T T T T T T G T
rs254930331
MGI SNP Detail
Alliance Variant
Chr3:106423794 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1161 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216979778
MGI SNP Detail
Alliance Variant
Chr3:106423953 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1320 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231155802
MGI SNP Detail
Alliance Variant
Chr3:106423965 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1332 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs585782819
MGI SNP Detail
Alliance Variant
Chr3:106423988 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1355 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261091144
MGI SNP Detail
Alliance Variant
Chr3:106424150 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1517 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs223739056
MGI SNP Detail
Alliance Variant
Chr3:106424226 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1593 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs246328664
MGI SNP Detail
Alliance Variant
Chr3:106424228 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1595 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A G A A A A A A A A A A
rs259631460
MGI SNP Detail
Alliance Variant
Chr3:106424275 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1642 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs220920277
MGI SNP Detail
Alliance Variant
Chr3:106424296 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1663 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A G A A A A G A A A G A A G G G A G A A A G A A G A A A A
rs579740679
MGI SNP Detail
Alliance Variant
Chr3:106424340 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1707 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs241592059
MGI SNP Detail
Alliance Variant
Chr3:106424407 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1774 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs259105288
MGI SNP Detail
Alliance Variant
Chr3:106424432 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1799 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs228340731
MGI SNP Detail
Alliance Variant
Chr3:106424459 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1826 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs242139442
MGI SNP Detail
Alliance Variant
Chr3:106424472 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1839 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs264654826
MGI SNP Detail
Alliance Variant
Chr3:106424478 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1845 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230770958
MGI SNP Detail
Alliance Variant
Chr3:106424503 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1870 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs255153481
MGI SNP Detail
Alliance Variant
Chr3:106424507 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1874 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263434467
MGI SNP Detail
Alliance Variant
Chr3:106424536 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1903 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs227138474
MGI SNP Detail
Alliance Variant
Chr3:106424539 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1906 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs248435227
MGI SNP Detail
Alliance Variant
Chr3:106424547 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1914 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216402390
MGI SNP Detail
Alliance Variant
Chr3:106424584 Cept1 Intron
Cept1 Noncoding-Transcript-Variant
Rr582852 1951 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
<< first < prev1 next > last >>
Showing SNP(s) 1 - 92 of 92

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/18/2025
MGI 6.24
The Jackson Laboratory