About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Rr582860
regulatory region 582860
MGI:8044992

<< first < prev1 next > last >>
Showing SNP(s) 1 - 65 of 65

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221384800
MGI SNP Detail		 Chr3:106589796 Gm56790 within coordinates of
Rr582860 1991 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243020090
MGI SNP Detail		 Chr3:106589815 Gm56790 within coordinates of
Rr582860 1972 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260886017
MGI SNP Detail		 Chr3:106589861 Gm56790 within coordinates of
Rr582860 1926 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219006470
MGI SNP Detail		 Chr3:106589887 Gm56790 within coordinates of
Rr582860 1900 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241459204
MGI SNP Detail		 Chr3:106590032 Gm56790 within coordinates of
Rr582860 1755 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265340922
MGI SNP Detail		 Chr3:106590045 Gm56790 within coordinates of
Rr582860 1742 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A G G A A G G G A G A A A G A A A G A A A A
rs230005816
MGI SNP Detail		 Chr3:106590086 Gm56790 within coordinates of
Rr582860 1701 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258360575
MGI SNP Detail		 Chr3:106590152 Gm56790 within coordinates of
Rr582860 1635 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216097204
MGI SNP Detail		 Chr3:106590246 Gm56790 within coordinates of
Rr582860 1541 bp proximal
 SNP T T T
rs226865766
MGI SNP Detail		 Chr3:106590304 Gm56790 within coordinates of
Rr582860 1483 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580448307
MGI SNP Detail		 Chr3:106590305 Gm56790 within coordinates of
Rr582860 1482 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247308634
MGI SNP Detail		 Chr3:106590344 Gm56790 within coordinates of
Rr582860 1443 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs233954542
MGI SNP Detail		 Chr3:106590382 Gm56790 within coordinates of
Rr582860 1405 bp proximal
 SNP G G G
rs237139519
MGI SNP Detail		 Chr3:106590387 Gm56790 within coordinates of
Rr582860 1400 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs248921306
MGI SNP Detail		 Chr3:106590436 Gm56790 within coordinates of
Rr582860 1351 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214880850
MGI SNP Detail		 Chr3:106590586 Gm56790 within coordinates of
Rr582860 1201 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235851542
MGI SNP Detail		 Chr3:106590605 Gm56790 within coordinates of
Rr582860 1182 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs263191231
MGI SNP Detail		 Chr3:106590708 Gm56790 within coordinates of
Rr582860 1079 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221364493
MGI SNP Detail		 Chr3:106590716 Gm56790 within coordinates of
Rr582860 1071 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236800819
MGI SNP Detail		 Chr3:106590726 Gm56790 within coordinates of
Rr582860 1061 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254687644
MGI SNP Detail		 Chr3:106590813 Gm56790 within coordinates of
Rr582860 974 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A G G G A A A A A G A A A A A A A A
rs219087857
MGI SNP Detail		 Chr3:106590954 Gm56790 within coordinates of
Rr582860 833 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs244384190
MGI SNP Detail		 Chr3:106591143 Gm56790 within coordinates of
Rr582860 644 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A G A A A G G G A G A A A G A A A A A A A A
rs262842322
MGI SNP Detail		 Chr3:106591198 Gm56790 within coordinates of
Rr582860 589 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G A A A G G G G G A G G G G G G G G
rs222339654
MGI SNP Detail		 Chr3:106591209 Gm56790 within coordinates of
Rr582860 578 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246510338
MGI SNP Detail		 Chr3:106591336 Gm56790 within coordinates of
Rr582860 451 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs257361661
MGI SNP Detail		 Chr3:106591356 Gm56790 within coordinates of
Rr582860 431 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs226811733
MGI SNP Detail		 Chr3:106591374 Gm56790 within coordinates of
Rr582860 413 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G A A A G A G G G A G G G G G G G G
rs583628573
MGI SNP Detail		 Chr3:106591443 Gm56790 within coordinates of
Rr582860 344 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247382451
MGI SNP Detail		 Chr3:106591569 Gm56790 within coordinates of
Rr582860 218 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C T T T C T C C C T C C C C C C C C
rs258996768
MGI SNP Detail		 Chr3:106591681 Gm56790 within coordinates of
Rr582860 106 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs33725187
MGI SNP Detail		 Chr3:106591890 Gm56790 within coordinates of
Rr582860 within coordinates of
 SNP C/T C C C C C C C C C C C C T T C
rs252375570
MGI SNP Detail		 Chr3:106591926 Gm56790 within coordinates of
Rr582860 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214498446
MGI SNP Detail		 Chr3:106591940 Gm56790 within coordinates of
Rr582860 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237828763
MGI SNP Detail		 Chr3:106592246 Cpgi13667 within coordinates of
Gm56790 within coordinates of
Rr582860 43 bp distal
Rr582861 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs246940333
MGI SNP Detail
Alliance Variant		 Chr3:106592342 Cpgi13667 within coordinates of
Gm56790 within coordinates of
Lrif1 mRNA-UTR
Lrif1 Noncoding-Transcript-Variant
Rr582860 139 bp distal
 SNP A/G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G A G G G G
rs33725190
MGI SNP Detail
Alliance Variant		 Chr3:106592345 Cpgi13667 within coordinates of
Gm56790 within coordinates of
Lrif1 mRNA-UTR
Lrif1 Noncoding-Transcript-Variant
Rr582860 142 bp distal
 SNP C/T C C C C C C C C C C C C T C C
rs236082317
MGI SNP Detail
Alliance Variant		 Chr3:106592353 Cpgi13667 within coordinates of
Gm56790 within coordinates of
Lrif1 mRNA-UTR
Lrif1 Noncoding-Transcript-Variant
Rr582860 150 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs254784705
MGI SNP Detail
Alliance Variant		 Chr3:106592395 Cpgi13667 within coordinates of
Gm56790 within coordinates of
Lrif1 mRNA-UTR
Lrif1 Noncoding-Transcript-Variant
Rr582860 192 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs221569248
MGI SNP Detail
Alliance Variant		 Chr3:106592514 Cpgi13667 within coordinates of
Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 311 bp distal
Rr582862 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234905816
MGI SNP Detail
Alliance Variant		 Chr3:106592752 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 549 bp distal
Rr582862 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C A C C C A A A C A C C C A C C C C C C C
rs262632631
MGI SNP Detail
Alliance Variant		 Chr3:106592769 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 566 bp distal
Rr582862 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A A G G A A A G A G G G A G G A G G G G
rs222736840
MGI SNP Detail
Alliance Variant		 Chr3:106592785 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 582 bp distal
Rr582862 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs249400948
MGI SNP Detail
Alliance Variant		 Chr3:106592987 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 784 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs251277199
MGI SNP Detail
Alliance Variant		 Chr3:106593063 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 860 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs222730716
MGI SNP Detail
Alliance Variant		 Chr3:106593098 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 895 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240914260
MGI SNP Detail
Alliance Variant		 Chr3:106593145 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 942 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579986986
MGI SNP Detail
Alliance Variant		 Chr3:106593219 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 1016 bp distal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs258914335
MGI SNP Detail
Alliance Variant		 Chr3:106593373 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 1170 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs48850614
MGI SNP Detail
Alliance Variant		 Chr3:106593452 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 1249 bp distal
 SNP C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229262581
MGI SNP Detail
Alliance Variant		 Chr3:106593476 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 1273 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241001725
MGI SNP Detail
Alliance Variant		 Chr3:106593490 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 1287 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs265261136
MGI SNP Detail
Alliance Variant		 Chr3:106593545 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 1342 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs229550545
MGI SNP Detail
Alliance Variant		 Chr3:106593586 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 1383 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs247035994
MGI SNP Detail
Alliance Variant		 Chr3:106593602 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 1399 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214981405
MGI SNP Detail
Alliance Variant		 Chr3:106593764 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 1561 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228905191
MGI SNP Detail
Alliance Variant		 Chr3:106593832 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 1629 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs583680463
MGI SNP Detail
Alliance Variant		 Chr3:106593948 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 1745 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs587010201
MGI SNP Detail
Alliance Variant		 Chr3:106593953 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 1750 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs247700826
MGI SNP Detail
Alliance Variant		 Chr3:106593978 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 1775 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs213220788
MGI SNP Detail
Alliance Variant		 Chr3:106594016 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 1813 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236771534
MGI SNP Detail
Alliance Variant		 Chr3:106594170 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 1967 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258116424
MGI SNP Detail
Alliance Variant		 Chr3:106594171 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 1968 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C G C C C C G C C C C C C C C C C C C C C C C C C
rs214558706
MGI SNP Detail
Alliance Variant		 Chr3:106594178 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 1975 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233827771
MGI SNP Detail
Alliance Variant		 Chr3:106594180 Lrif1 Intron
Lrif1 Noncoding-Transcript-Variant
Rr582860 1977 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A T A A T T T A T A A A T A A T A A A A
<< first < prev1 next > last >>
Showing SNP(s) 1 - 65 of 65
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory