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Mouse SNP Summary
Symbol
Name
ID 		Rr582887
regulatory region 582887
MGI:8045019

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Showing SNP(s) 1 - 37 of 37

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239908803
MGI SNP Detail		 Chr3:106942953 Cpgi13669 within coordinates of
Rr582887 1939 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G G G T G G T G G G T T T G T G G G T G G G G G G G G
rs262802720
MGI SNP Detail		 Chr3:106942955 Cpgi13669 within coordinates of
Rr582887 1937 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs226556517
MGI SNP Detail		 Chr3:106942996 Cpgi13669 within coordinates of
Rr582885 within coordinates of
Rr582887 1896 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249907327
MGI SNP Detail		 Chr3:106943009 Cpgi13669 within coordinates of
Rr582885 within coordinates of
Rr582887 1883 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G A A A G A G G G A G G G G G G G G
rs261816955
MGI SNP Detail		 Chr3:106943042 Cpgi13669 within coordinates of
Rr582885 within coordinates of
Rr582887 1850 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217884074
MGI SNP Detail		 Chr3:106943136 Cpgi13669 within coordinates of
Rr582885 within coordinates of
Rr582887 1756 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A C C A A C C C A C A A A C A A C A A A A
rs239349409
MGI SNP Detail		 Chr3:106943212 Cpgi13669 within coordinates of
Rr582885 within coordinates of
Rr582887 1680 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C C C C C A C C C A A A C A C C C A C C C C C C C C
rs257933189
MGI SNP Detail		 Chr3:106943233 Cpgi13669 within coordinates of
Rr582885 within coordinates of
Rr582887 1659 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G T G G G T T T G T G G G T G G G G G G G
rs228284972
MGI SNP Detail		 Chr3:106943325 Cpgi13669 within coordinates of
Rr582885 within coordinates of
Rr582887 1567 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252697541
MGI SNP Detail		 Chr3:106943342 Cpgi13669 within coordinates of
Rr582885 within coordinates of
Rr582887 1550 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs266227324
MGI SNP Detail
Alliance Variant		 Chr3:106943499 Cpgi13669 within coordinates of
Kcna3 mRNA-UTR
Rr582887 1393 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584751283
MGI SNP Detail
Alliance Variant		 Chr3:106943572 Cpgi13669 within coordinates of
Kcna3 mRNA-UTR
Rr582887 1320 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs579053131
MGI SNP Detail
Alliance Variant		 Chr3:106943591 Cpgi13669 within coordinates of
Kcna3 mRNA-UTR
Rr582887 1301 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs233354700
MGI SNP Detail
Alliance Variant		 Chr3:106943658 Cpgi13669 within coordinates of
Kcna3 mRNA-UTR
Rr582887 1234 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254423959
MGI SNP Detail
Alliance Variant		 Chr3:106943873 Cpgi13669 within coordinates of
Kcna3 Coding-Synonymous
Rr582887 1019 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs31671180
MGI SNP Detail
Alliance Variant		 Chr3:106943930 Cpgi13669 within coordinates of
Kcna3 Coding-Synonymous
Rr582887 962 bp proximal
 SNP C/T T C C
rs232209842
MGI SNP Detail
Alliance Variant		 Chr3:106944128 Cpgi13669 within coordinates of
Kcna3 Coding-Synonymous
Rr582887 764 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C T C C T C C C T T T C T C C C T C C C C C C C C
rs243861620
MGI SNP Detail
Alliance Variant		 Chr3:106944237 Cpgi13669 within coordinates of
Kcna3 Coding-NonSynonymous
Rr582887 655 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs213621344
MGI SNP Detail
Alliance Variant		 Chr3:106944275 Cpgi13669 within coordinates of
Kcna3 Coding-Synonymous
Rr582887 617 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233593372
MGI SNP Detail
Alliance Variant		 Chr3:106944440 Cpgi13669 within coordinates of
Kcna3 Coding-Synonymous
Rr582887 452 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258609585
MGI SNP Detail
Alliance Variant		 Chr3:106944534 Cpgi13669 within coordinates of
Kcna3 Coding-Synonymous
Rr582887 358 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs30115755
MGI SNP Detail
Alliance Variant		 Chr3:106944686 Cpgi13669 within coordinates of
Kcna3 Coding-Synonymous
Rr582887 206 bp proximal
 SNP A/G A G A
rs239336930
MGI SNP Detail
Alliance Variant		 Chr3:106944803 Kcna3 Coding-Synonymous
Rr582887 89 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs261381255
MGI SNP Detail
Alliance Variant		 Chr3:106944914 Gm56792 within coordinates of
Kcna3 Coding-Synonymous
Rr582887 1 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217916209
MGI SNP Detail
Alliance Variant		 Chr3:106945094 Gm56792 within coordinates of
Kcna3 Coding-Synonymous
Rr582887 181 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239389608
MGI SNP Detail
Alliance Variant		 Chr3:106945100 Gm56792 within coordinates of
Kcna3 Coding-Synonymous
Rr582887 187 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C T C C T C C C T T T C T C C C T C C C C C C C C
rs257276777
MGI SNP Detail
Alliance Variant		 Chr3:106945325 Gm56792 within coordinates of
Kcna3 Coding
Rr582887 412 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221479200
MGI SNP Detail
Alliance Variant		 Chr3:106945411 Gm56792 within coordinates of
Kcna3 mRNA-UTR
Rr582887 498 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C T C C C T T T C T C C C T C C C C C C C C
rs248446736
MGI SNP Detail
Alliance Variant		 Chr3:106945699 Kcna3 mRNA-UTR
Rr397927 within coordinates of
Rr582887 786 bp distal
Rr582888 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs264593593
MGI SNP Detail
Alliance Variant		 Chr3:106945757 Kcna3 mRNA-UTR
Rr397927 within coordinates of
Rr582887 844 bp distal
Rr582888 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs234416557
MGI SNP Detail
Alliance Variant		 Chr3:106945921 Kcna3 mRNA-UTR
Rr582887 1008 bp distal
Rr582888 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250131295
MGI SNP Detail
Alliance Variant		 Chr3:106946006 Kcna3 mRNA-UTR
Rr582887 1093 bp distal
Rr582888 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs31142462
MGI SNP Detail
Alliance Variant		 Chr3:106946442 Kcna3 mRNA-UTR
Rr397928 within coordinates of
Rr582887 1529 bp distal
Rr582889 within coordinates of
 SNP A/G G A G
rs226208087
MGI SNP Detail
Alliance Variant		 Chr3:106946586 Kcna3 mRNA-UTR
Rr582887 1673 bp distal
Rr582889 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A G A A G G A A G G G A G A A A G A A A G A A A A
rs582469148
MGI SNP Detail
Alliance Variant		 Chr3:106946664 Kcna3 mRNA-UTR
Rr582887 1751 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243993834
MGI SNP Detail
Alliance Variant		 Chr3:106946696 Kcna3 mRNA-UTR
Rr582887 1783 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs216031596
MGI SNP Detail
Alliance Variant		 Chr3:106946747 Kcna3 mRNA-UTR
Rr582887 1834 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G A G G A A G G A A A G A G G G A G G G A G G G G
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Showing SNP(s) 1 - 37 of 37
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory
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