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Mouse SNP Summary
Symbol
Name
ID 		Rr583041
regulatory region 583041
MGI:8045173

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Showing SNP(s) 1 - 54 of 54

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219124904
MGI SNP Detail
Alliance Variant		 Chr3:107663045 Csf1 Intron
Gm40121 within coordinates of
Rr583041 1852 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C C T T T C C T C T T T C T T T C T T T T
rs216243136
MGI SNP Detail
Alliance Variant		 Chr3:107663170 Csf1 Intron
Gm40121 within coordinates of
Rr583041 1727 bp proximal
 SNP C/T T C
rs265456313
MGI SNP Detail
Alliance Variant		 Chr3:107663181 Csf1 Intron
Gm40121 within coordinates of
Rr583041 1716 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A A G G G A A G A G G G A G G G G G G G G
rs226554468
MGI SNP Detail
Alliance Variant		 Chr3:107663195 Csf1 Intron
Gm40121 within coordinates of
Rr583041 1702 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A G G A A A G G A G A A A G A A A G A A A G
rs249999640
MGI SNP Detail
Alliance Variant		 Chr3:107663270 Csf1 Intron
Gm40121 within coordinates of
Rr583041 1627 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261908948
MGI SNP Detail
Alliance Variant		 Chr3:107663502 Csf1 Intron
Gm40121 within coordinates of
Rr583041 1395 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224211685
MGI SNP Detail
Alliance Variant		 Chr3:107663524 Csf1 Intron
Gm40121 within coordinates of
Rr583041 1373 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A A G G G A A G A G G G A G G G G G G G G
rs243562542
MGI SNP Detail
Alliance Variant		 Chr3:107663525 Csf1 Intron
Gm40121 within coordinates of
Rr583041 1372 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258389383
MGI SNP Detail
Alliance Variant		 Chr3:107663604 Csf1 Intron
Gm40121 within coordinates of
Rr583041 1293 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225873986
MGI SNP Detail
Alliance Variant		 Chr3:107663605 Csf1 Intron
Gm40121 within coordinates of
Rr583041 1292 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253325506
MGI SNP Detail
Alliance Variant		 Chr3:107663697 Csf1 Intron
Gm40121 within coordinates of
Rr583041 1200 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs216436633
MGI SNP Detail
Alliance Variant		 Chr3:107663801 Csf1 Intron
Gm40121 within coordinates of
Rr583041 1096 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234092870
MGI SNP Detail
Alliance Variant		 Chr3:107664067 Csf1 Intron
Gm40121 within coordinates of
Rr583041 830 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259507747
MGI SNP Detail
Alliance Variant		 Chr3:107664136 Csf1 Intron
Gm40121 within coordinates of
Rr583041 761 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213226342
MGI SNP Detail
Alliance Variant		 Chr3:107664150 Csf1 Intron
Gm40121 within coordinates of
Rr583041 747 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230324727
MGI SNP Detail
Alliance Variant		 Chr3:107664218 Csf1 Intron
Gm40121 within coordinates of
Rr583041 679 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs250870382
MGI SNP Detail
Alliance Variant		 Chr3:107664304 Csf1 Intron
Csf1 Splice-Site
Gm40121 within coordinates of
Rr583041 593 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T T C C C T T C T C C C T C C C T C C C C
rs213346354
MGI SNP Detail
Alliance Variant		 Chr3:107664355 Csf1 Coding-NonSynonymous
Csf1 Intron
Gm40121 within coordinates of
Rr583041 542 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs233324398
MGI SNP Detail
Alliance Variant		 Chr3:107664362 Csf1 Coding-Synonymous
Csf1 Intron
Gm40121 within coordinates of
Rr583041 535 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258386942
MGI SNP Detail
Alliance Variant		 Chr3:107664519 Csf1 Intron
Gm40121 within coordinates of
Rr583041 378 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33784404
MGI SNP Detail
Alliance Variant		 Chr3:107664632 Csf1 Intron
Gm40121 within coordinates of
Rr583041 265 bp proximal
 SNP C/T T C C T C
rs247259666
MGI SNP Detail
Alliance Variant		 Chr3:107664729 Csf1 Intron
Gm40121 within coordinates of
Rr583041 168 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs261459636
MGI SNP Detail
Alliance Variant		 Chr3:107664750 Csf1 Intron
Gm40121 within coordinates of
Rr583041 147 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218075100
MGI SNP Detail
Alliance Variant		 Chr3:107664865 Csf1 Intron
Gm40121 within coordinates of
Rr583041 32 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs33784407
MGI SNP Detail
Alliance Variant		 Chr3:107664880 Csf1 Intron
Gm40121 within coordinates of
Rr583041 17 bp proximal
 SNP C/T C T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257559507
MGI SNP Detail
Alliance Variant		 Chr3:107664950 Csf1 Intron
Gm40121 within coordinates of
Rr583041 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225831881
MGI SNP Detail
Alliance Variant		 Chr3:107664951 Csf1 Intron
Gm40121 within coordinates of
Rr583041 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249213897
MGI SNP Detail
Alliance Variant		 Chr3:107664986 Csf1 Intron
Gm40121 within coordinates of
Rr583041 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs218477116
MGI SNP Detail
Alliance Variant		 Chr3:107665097 Csf1 Intron
Gm40121 within coordinates of
Rr583041 within coordinates of
 SNP A/G G A
rs235177466
MGI SNP Detail
Alliance Variant		 Chr3:107665297 Csf1 Intron
Gm40121 within coordinates of
Rr583041 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254127041
MGI SNP Detail
Alliance Variant		 Chr3:107665416 Csf1 Intron
Gm40121 within coordinates of
Rr583041 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213150860
MGI SNP Detail
Alliance Variant		 Chr3:107665497 Csf1 Intron
Gm40121 within coordinates of
Rr583041 13 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223783687
MGI SNP Detail
Alliance Variant		 Chr3:107665571 Csf1 Intron
Gm40121 within coordinates of
Rr583041 87 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs244884478
MGI SNP Detail
Alliance Variant		 Chr3:107665586 Csf1 Intron
Gm40121 within coordinates of
Rr583041 102 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs214005616
MGI SNP Detail
Alliance Variant		 Chr3:107665608 Csf1 Intron
Gm40121 within coordinates of
Rr583041 124 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238307626
MGI SNP Detail
Alliance Variant		 Chr3:107665633 Csf1 Intron
Gm40121 within coordinates of
Rr583041 149 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs262730067
MGI SNP Detail
Alliance Variant		 Chr3:107665669 Csf1 Intron
Gm40121 within coordinates of
Rr583041 185 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218824298
MGI SNP Detail
Alliance Variant		 Chr3:107665681 Csf1 Intron
Gm40121 within coordinates of
Rr583041 197 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241796694
MGI SNP Detail
Alliance Variant		 Chr3:107665720 Csf1 Intron
Gm40121 within coordinates of
Rr583041 236 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs250228872
MGI SNP Detail
Alliance Variant		 Chr3:107665929 Csf1 Intron
Gm40121 within coordinates of
Rr583041 445 bp distal
Rr583042 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218034212
MGI SNP Detail
Alliance Variant		 Chr3:107665972 Csf1 Intron
Gm40121 within coordinates of
Rr583041 488 bp distal
Rr583042 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239627247
MGI SNP Detail
Alliance Variant		 Chr3:107666039 Csf1 Intron
Gm40121 within coordinates of
Rr583041 555 bp distal
Rr583042 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A A G G G A A G A G G G A G G G G G G G G
rs251163166
MGI SNP Detail
Alliance Variant		 Chr3:107666232 Csf1 Intron
Gm40121 within coordinates of
Rr583041 748 bp distal
Rr583042 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33784410
MGI SNP Detail
Alliance Variant		 Chr3:107666233 Csf1 Intron
Gm40121 within coordinates of
Rr583041 749 bp distal
Rr583042 within coordinates of
 SNP C/T T C T C
rs246473090
MGI SNP Detail
Alliance Variant		 Chr3:107666333 Csf1 Intron
Gm40121 within coordinates of
Rr583041 849 bp distal
Rr583042 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265519859
MGI SNP Detail
Alliance Variant		 Chr3:107666394 Csf1 Intron
Gm40121 within coordinates of
Rr583041 910 bp distal
Rr583042 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233969257
MGI SNP Detail
Alliance Variant		 Chr3:107666440 Csf1 Intron
Gm40121 within coordinates of
Rr583041 956 bp distal
Rr583042 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250374163
MGI SNP Detail
Alliance Variant		 Chr3:107666451 Csf1 Intron
Gm40121 within coordinates of
Rr583041 967 bp distal
Rr583042 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254811380
MGI SNP Detail
Alliance Variant		 Chr3:107666495 Csf1 Intron
Gm40121 within coordinates of
Rr583041 1011 bp distal
Rr583042 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223686386
MGI SNP Detail
Alliance Variant		 Chr3:107666599 Csf1 Intron
Gm40121 within coordinates of
Rr583041 1115 bp distal
Rr583042 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244807864
MGI SNP Detail
Alliance Variant		 Chr3:107666618 Csf1 Intron
Gm40121 within coordinates of
Rr583041 1134 bp distal
Rr583042 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs255781788
MGI SNP Detail
Alliance Variant		 Chr3:107666730 Csf1 Intron
D3Mit104.3 within coordinates of
Gm40121 within coordinates of
Rr583041 1246 bp distal
Rr583042 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs586482202
MGI SNP Detail
Alliance Variant		 Chr3:107666772 Csf1 Intron
D3Mit104 within coordinates of
D3Mit104.3 within coordinates of
Gm40121 within coordinates of
Rr583041 1288 bp distal
Rr583042 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A C C A C A A A A A A A A A A A
rs239205507
MGI SNP Detail
Alliance Variant		 Chr3:107667320 Cpgi13681 within coordinates of
Csf1 Intron
Gm40121 within coordinates of
Rr583041 1836 bp distal
Rr583042 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 54 of 54
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory
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