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Mouse SNP Summary
Symbol
Name
ID 		Rr583231
regulatory region 583231
MGI:8045363

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Showing SNP(s) 1 - 59 of 59

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29610089
MGI SNP Detail
Alliance Variant		 Chr3:108320792 Celsr2 Coding-Synonymous
Celsr2 Intron
Rr583231 1967 bp proximal
 SNP C/T T T T T T T C T T T T T C C T
rs237324021
MGI SNP Detail
Alliance Variant		 Chr3:108320909 Celsr2 Coding-Synonymous
Celsr2 Intron
Rr583231 1850 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs262155063
MGI SNP Detail
Alliance Variant		 Chr3:108320942 Celsr2 Coding-Synonymous
Celsr2 Intron
Rr583231 1817 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29610092
MGI SNP Detail
Alliance Variant		 Chr3:108320960 Celsr2 Coding-Synonymous
Celsr2 Intron
Rr583231 1799 bp proximal
 SNP A/C A A A A A A A A A A C A A A A
rs240844561
MGI SNP Detail
Alliance Variant		 Chr3:108320978 Celsr2 Coding-Synonymous
Celsr2 Intron
Rr583231 1781 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29635315
MGI SNP Detail
Alliance Variant		 Chr3:108321004 Celsr2 Coding-NonSynonymous
Celsr2 Intron
Rr583231 1755 bp proximal
 SNP C/T C C C C C C C C C C T C C C C
rs261024511
MGI SNP Detail
Alliance Variant		 Chr3:108321005 Celsr2 Coding-Synonymous
Celsr2 Intron
Rr583231 1754 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222302202
MGI SNP Detail
Alliance Variant		 Chr3:108321035 Celsr2 Coding-Synonymous
Celsr2 Intron
Rr583231 1724 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244615111
MGI SNP Detail
Alliance Variant		 Chr3:108321317 Celsr2 Coding-Synonymous
Celsr2 Intron
Rr583231 1442 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261361020
MGI SNP Detail
Alliance Variant		 Chr3:108321428 Celsr2 Coding-Synonymous
Celsr2 Intron
Rr583231 1331 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C C T T T C C T C T T T C T T T C T T T T
rs29635318
MGI SNP Detail
Alliance Variant		 Chr3:108321506 Celsr2 Coding-Synonymous
Celsr2 Intron
Rr583231 1253 bp proximal
 SNP A/G G G G G G G A G G G G A A
rs250590574
MGI SNP Detail
Alliance Variant		 Chr3:108321539 Celsr2 Coding-Synonymous
Celsr2 Intron
Rr583231 1220 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265671393
MGI SNP Detail
Alliance Variant		 Chr3:108321626 Celsr2 Coding-Synonymous
Celsr2 Intron
Rr583231 1133 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226835959
MGI SNP Detail
Alliance Variant		 Chr3:108321647 Celsr2 Coding-Synonymous
Celsr2 Intron
Rr583231 1112 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T C C C C T T C T C C C T C C C C C C C C
rs247384635
MGI SNP Detail
Alliance Variant		 Chr3:108321661 Celsr2 Coding-NonSynonymous
Celsr2 Intron
Rr583231 1098 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C C T T T C C T C T T T C T T T C T T T T
rs216632373
MGI SNP Detail
Alliance Variant		 Chr3:108321704 Celsr2 Coding-Synonymous
Celsr2 Intron
Rr583231 1055 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T C C C C T T C T C C C T C C C C C C C C
rs234463379
MGI SNP Detail
Alliance Variant		 Chr3:108321749 Celsr2 Coding-Synonymous
Celsr2 Intron
Rr583231 1010 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs254290324
MGI SNP Detail
Alliance Variant		 Chr3:108321755 Celsr2 Coding-Synonymous
Celsr2 Intron
Rr583231 1004 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212235914
MGI SNP Detail
Alliance Variant		 Chr3:108321805 Celsr2 Coding-NonSynonymous
Celsr2 Intron
Rr583231 954 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs239128519
MGI SNP Detail
Alliance Variant		 Chr3:108321860 Celsr2 Coding-Synonymous
Celsr2 Intron
Rr583231 899 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257357342
MGI SNP Detail
Alliance Variant		 Chr3:108322079 Celsr2 Coding-Synonymous
Celsr2 Intron
Rr583231 680 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs222105535
MGI SNP Detail
Alliance Variant		 Chr3:108322336 Celsr2 Coding-NonSynonymous
Celsr2 Intron
Cpgi13701 within coordinates of
Rr583231 423 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234384773
MGI SNP Detail
Alliance Variant		 Chr3:108322885 Celsr2 Intron
Celsr2 mRNA-UTR
Cpgi13701 within coordinates of
Rr583231 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs255649850
MGI SNP Detail
Alliance Variant		 Chr3:108322906 Celsr2 Intron
Celsr2 mRNA-UTR
Cpgi13701 within coordinates of
Rr583231 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G C C G G G C C G C G G G C G G G C G G G
rs6256892
MGI SNP Detail
Alliance Variant		 Chr3:108323131 Celsr2 Intron
Celsr2 mRNA-UTR
Cpgi13701 within coordinates of
Rr583231 within coordinates of
 SNP C/G C G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs6256905
MGI SNP Detail
Alliance Variant		 Chr3:108323141 Celsr2 Intron
Celsr2 mRNA-UTR
Cpgi13701 within coordinates of
Rr583231 within coordinates of
 SNP C/T C T
rs6257837
MGI SNP Detail
Alliance Variant		 Chr3:108323285 Celsr2 mRNA-UTR
Cpgi13701 within coordinates of
Rr583231 within coordinates of
 SNP C/G G C
rs223138942
MGI SNP Detail
Alliance Variant		 Chr3:108323319 Celsr2 mRNA-UTR
Cpgi13701 within coordinates of
Rr583231 11 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585786460
MGI SNP Detail		 Chr3:108323432 Cpgi13701 within coordinates of
Gm52630 within coordinates of
Rr583231 124 bp distal
Rr583233 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245661294
MGI SNP Detail		 Chr3:108323667 Cpgi13701 within coordinates of
Gm52630 within coordinates of
Rr583231 359 bp distal
Rr583233 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C C T T T C C T C T T T C T T T C T T T T
rs257987221
MGI SNP Detail		 Chr3:108323803 Gm52630 within coordinates of
Rr583231 495 bp distal
Rr583233 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs226753738
MGI SNP Detail		 Chr3:108323915 Gm52630 within coordinates of
Rr583231 607 bp distal
Rr583233 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247301536
MGI SNP Detail		 Chr3:108323935 Gm52630 within coordinates of
Rr583231 627 bp distal
Rr583233 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs259023616
MGI SNP Detail		 Chr3:108323936 Gm52630 within coordinates of
Rr583231 628 bp distal
Rr583233 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs229198934
MGI SNP Detail		 Chr3:108324006 Gm52630 within coordinates of
Rr583231 698 bp distal
Rr583233 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs249969525
MGI SNP Detail		 Chr3:108324076 Gm52630 within coordinates of
Rr583231 768 bp distal
Rr583233 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs212285757
MGI SNP Detail		 Chr3:108324137 Gm52630 within coordinates of
Rr583231 829 bp distal
Rr583233 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231088001
MGI SNP Detail		 Chr3:108324229 Gm52630 within coordinates of
Rr583231 921 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T A T T T T
rs255436090
MGI SNP Detail		 Chr3:108324331 Gm52630 within coordinates of
Rr583231 1023 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G G G A A G A G G G A G G G G G G G G
rs216056871
MGI SNP Detail		 Chr3:108324424 Rr583231 1116 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234303172
MGI SNP Detail		 Chr3:108324445 Rr583231 1137 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G C G G G G
rs237513825
MGI SNP Detail		 Chr3:108324473 Rr583231 1165 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G G A A A G G A G A A A G A A A A A A A A
rs255193245
MGI SNP Detail		 Chr3:108324488 Rr583231 1180 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C A C C C C A A C A C C C A C C C C C C C C
rs222707864
MGI SNP Detail		 Chr3:108324528 Rr583231 1220 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs242723812
MGI SNP Detail		 Chr3:108324552 Rr583231 1244 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T A A T T T A A T A T T T A T T T A T T T T
rs251784719
MGI SNP Detail		 Chr3:108324616 Rr583231 1308 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T C C C C T T C T C C C T C C C T C C C C
rs220542796
MGI SNP Detail		 Chr3:108324625 Rr583231 1317 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241486681
MGI SNP Detail		 Chr3:108324681 Rr583231 1373 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258786416
MGI SNP Detail		 Chr3:108324698 Rr583231 1390 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs228733458
MGI SNP Detail		 Chr3:108324770 Rr583231 1462 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243930647
MGI SNP Detail		 Chr3:108324775 Rr583231 1467 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G T G G G G
rs261576779
MGI SNP Detail		 Chr3:108324784 Rr583231 1476 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs231293500
MGI SNP Detail		 Chr3:108324901 Rr583231 1593 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T T C C C T T C T C C C T C C C T C C C C
rs245049603
MGI SNP Detail		 Chr3:108324908 Rr583231 1600 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs216126548
MGI SNP Detail		 Chr3:108324993 Rr583231 1685 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227480760
MGI SNP Detail		 Chr3:108325095 Rr583231 1787 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G G A A A G G A G A A A G A A A G A A A A
rs249066318
MGI SNP Detail		 Chr3:108325098 Rr583231 1790 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs218406346
MGI SNP Detail		 Chr3:108325299 Rr583231 1991 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T T C C C T T C T C C C T C C C T C C C C
rs235817711
MGI SNP Detail		 Chr3:108325304 Rr583231 1996 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 59 of 59
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory