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Mouse SNP Summary
Symbol
Name
ID
Rr583357
regulatory region 583357
MGI:8045489

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs242659755
MGI SNP Detail
Alliance Variant
Chr3:108866469 Henmt1 Intron
Henmt1 mRNA-UTR
Henmt1 Noncoding-Transcript-Variant
Rr583357 1895 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259987249
MGI SNP Detail
Alliance Variant
Chr3:108866511 Henmt1 Intron
Henmt1 mRNA-UTR
Henmt1 Noncoding-Transcript-Variant
Rr583357 1853 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs29688944
MGI SNP Detail
Alliance Variant
Chr3:108866535 Henmt1 Intron
Henmt1 mRNA-UTR
Henmt1 Noncoding-Transcript-Variant
Rr583357 1829 bp proximal
SNP C/T T T T T C T T T T T T
rs234663922
MGI SNP Detail
Alliance Variant
Chr3:108866552 Henmt1 Intron
Henmt1 mRNA-UTR
Henmt1 Noncoding-Transcript-Variant
Rr583357 1812 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262367845
MGI SNP Detail
Alliance Variant
Chr3:108866660 Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 1704 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A T T A A A T T A T A A A T A A A A A A A A
rs219437803
MGI SNP Detail
Alliance Variant
Chr3:108866670 Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 1694 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs241185588
MGI SNP Detail
Alliance Variant
Chr3:108866720 Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 1644 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260085563
MGI SNP Detail
Alliance Variant
Chr3:108866725 Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 1639 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs221200682
MGI SNP Detail
Alliance Variant
Chr3:108866761 Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 1603 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251338760
MGI SNP Detail
Alliance Variant
Chr3:108866782 Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 1582 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs264065147
MGI SNP Detail
Alliance Variant
Chr3:108866790 Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 1574 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs29688947
MGI SNP Detail
Alliance Variant
Chr3:108866829 Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 1535 bp proximal
SNP A/G A A A A A G A A G A G A
rs249490448
MGI SNP Detail
Alliance Variant
Chr3:108866922 Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 1442 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259675807
MGI SNP Detail
Alliance Variant
Chr3:108866992 Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 1372 bp proximal
SNP A/T T A
rs220860452
MGI SNP Detail
Alliance Variant
Chr3:108867039 Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 1325 bp proximal
SNP A/G G A
rs29688950
MGI SNP Detail
Alliance Variant
Chr3:108867040 Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 1324 bp proximal
SNP A/T T T T T T T T T A T A T
rs29688953
MGI SNP Detail
Alliance Variant
Chr3:108867090 Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 1274 bp proximal
SNP G/T T T T T T G T T G T G T
rs233658281
MGI SNP Detail
Alliance Variant
Chr3:108867093 Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 1271 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs258808398
MGI SNP Detail
Alliance Variant
Chr3:108867140 Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 1224 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T T C C C T T C T C C C T C C C C C C C C
rs212518931
MGI SNP Detail
Alliance Variant
Chr3:108867158 Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 1206 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C C T T T C C T C T T T C T T T T T T T T
rs235903881
MGI SNP Detail
Alliance Variant
Chr3:108867162 Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 1202 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252012497
MGI SNP Detail
Alliance Variant
Chr3:108867358 Henmt1 Coding-NonSynonymous
Henmt1 mRNA-UTR
Henmt1 Noncoding-Transcript-Variant
Rr583357 1006 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs213659565
MGI SNP Detail
Alliance Variant
Chr3:108867380 Henmt1 Coding-NonSynonymous
Henmt1 mRNA-UTR
Henmt1 Noncoding-Transcript-Variant
Rr583357 984 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234646894
MGI SNP Detail
Alliance Variant
Chr3:108867399 Henmt1 Coding-Synonymous
Henmt1 mRNA-UTR
Henmt1 Noncoding-Transcript-Variant
Rr583357 965 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A C C A A A C C A C A A A C A A A C A A A A
rs252690814
MGI SNP Detail
Alliance Variant
Chr3:108867600 Henmt1 Coding-Synonymous
Henmt1 Noncoding-Transcript-Variant
Rr583357 764 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs224363513
MGI SNP Detail
Alliance Variant
Chr3:108867648 Henmt1 Coding-NonSynonymous
Henmt1 Noncoding-Transcript-Variant
Rr583357 716 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs29689796
MGI SNP Detail
Alliance Variant
Chr3:108867655 Henmt1 mRNA-UTR
Henmt1 Noncoding-Transcript-Variant
Rr583357 709 bp proximal
SNP A/G G G G G G A G G G G G G G
rs263776761
MGI SNP Detail
Alliance Variant
Chr3:108867661 Henmt1 mRNA-UTR
Henmt1 Noncoding-Transcript-Variant
Rr583357 703 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221629165
MGI SNP Detail
Alliance Variant
Chr3:108867692 Henmt1 mRNA-UTR
Henmt1 Noncoding-Transcript-Variant
Rr583357 672 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs244158419
MGI SNP Detail
Alliance Variant
Chr3:108867693 Henmt1 mRNA-UTR
Henmt1 Noncoding-Transcript-Variant
Rr583357 671 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256733406
MGI SNP Detail
Alliance Variant
Chr3:108867738 Henmt1 mRNA-UTR
Henmt1 Noncoding-Transcript-Variant
Rr583357 626 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225752403
MGI SNP Detail
Alliance Variant
Chr3:108867760 Henmt1 mRNA-UTR
Henmt1 Noncoding-Transcript-Variant
Rr583357 604 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs240263044
MGI SNP Detail
Alliance Variant
Chr3:108867775 Henmt1 mRNA-UTR
Henmt1 Noncoding-Transcript-Variant
Rr583357 589 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257554545
MGI SNP Detail
Alliance Variant
Chr3:108867901 Henmt1 mRNA-UTR
Henmt1 Noncoding-Transcript-Variant
Rr583357 463 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs234685126
MGI SNP Detail
Alliance Variant
Chr3:108867962 Henmt1 mRNA-UTR
Henmt1 Noncoding-Transcript-Variant
Rr583357 402 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A T T A A A T T A T A A A T A A T A A A A
rs253701532
MGI SNP Detail
Alliance Variant
Chr3:108868129 Henmt1 Noncoding-Transcript-Variant
Rr583357 235 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213021789
MGI SNP Detail
Alliance Variant
Chr3:108868130 Henmt1 Noncoding-Transcript-Variant
Rr583357 234 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A A G G G A A G A G G G A G G G A G G G G
rs227258931
MGI SNP Detail
Alliance Variant
Chr3:108868159 Henmt1 Noncoding-Transcript-Variant
Rr583357 205 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245478394
MGI SNP Detail
Alliance Variant
Chr3:108868174 Henmt1 Noncoding-Transcript-Variant
Rr583357 190 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213576280
MGI SNP Detail
Alliance Variant
Chr3:108868234 Henmt1 Noncoding-Transcript-Variant
Rr583357 130 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs234758340
MGI SNP Detail
Alliance Variant
Chr3:108868246 Henmt1 Noncoding-Transcript-Variant
Rr583357 118 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29689799
MGI SNP Detail
Alliance Variant
Chr3:108868247 Henmt1 Noncoding-Transcript-Variant
Rr583357 117 bp proximal
SNP A/G G G G G G A G G A G A G
rs219037124
MGI SNP Detail
Alliance Variant
Chr3:108868254 Henmt1 Noncoding-Transcript-Variant
Rr583357 110 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs241967670
MGI SNP Detail
Alliance Variant
Chr3:108868371 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260400066
MGI SNP Detail
Alliance Variant
Chr3:108868381 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221339667
MGI SNP Detail
Alliance Variant
Chr3:108868386 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP A/G/T G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A A G G G A A G A G G G A G G G T G G G G
rs235944545
MGI SNP Detail
Alliance Variant
Chr3:108868390 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250559394
MGI SNP Detail
Alliance Variant
Chr3:108868422 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219659013
MGI SNP Detail
Alliance Variant
Chr3:108868436 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs240430442
MGI SNP Detail
Alliance Variant
Chr3:108868468 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265610179
MGI SNP Detail
Alliance Variant
Chr3:108868486 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234116774
MGI SNP Detail
Alliance Variant
Chr3:108868554 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250553489
MGI SNP Detail
Alliance Variant
Chr3:108868603 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261825114
MGI SNP Detail
Alliance Variant
Chr3:108868606 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227859031
MGI SNP Detail
Alliance Variant
Chr3:108868612 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245398587
MGI SNP Detail
Alliance Variant
Chr3:108868633 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs257242682
MGI SNP Detail
Alliance Variant
Chr3:108868710 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T C C C T T C C C C C T C C C C C C C C
rs29689802
MGI SNP Detail
Alliance Variant
Chr3:108868718 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP A/G G G G G G G G G G G A G
rs586794577
MGI SNP Detail
Alliance Variant
Chr3:108868721 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs246419399
MGI SNP Detail
Alliance Variant
Chr3:108868774 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219099320
MGI SNP Detail
Alliance Variant
Chr3:108868813 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242560127
MGI SNP Detail
Alliance Variant
Chr3:108868827 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/T T C
rs254090065
MGI SNP Detail
Alliance Variant
Chr3:108868845 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A A G G G A A G A G G G A G G G G G G G G
rs212959543
MGI SNP Detail
Alliance Variant
Chr3:108868860 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T G G T T T G G T G T T T G T T T G T T T T
rs265827649
MGI SNP Detail
Alliance Variant
Chr3:108868869 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/T C T
rs250523963
MGI SNP Detail
Alliance Variant
Chr3:108868874 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A A G G G A A G A G G G A G G G G G G G G
rs29690705
MGI SNP Detail
Alliance Variant
Chr3:108869016 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/T C C C C C T C C C C C C C
rs233669945
MGI SNP Detail
Alliance Variant
Chr3:108869036 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/G/T G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G C C G G G C C G C G G G C G G G T G G G G
rs259001507
MGI SNP Detail
Alliance Variant
Chr3:108869037 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs582981821
MGI SNP Detail
Alliance Variant
Chr3:108869044 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs587482433
MGI SNP Detail
Alliance Variant
Chr3:108869045 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A A G G G A A G A G G G A G G G G G G G G
rs227672646
MGI SNP Detail
Alliance Variant
Chr3:108869207 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G G A A A G G A G A A A G A A A G A A A G
rs228329137
MGI SNP Detail
Alliance Variant
Chr3:108869344 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP A/G G A
rs264934775
MGI SNP Detail
Alliance Variant
Chr3:108869352 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T T C C C T T C T C C C T C C C T C C C C
rs217920794
MGI SNP Detail
Alliance Variant
Chr3:108869427 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29690708
MGI SNP Detail
Alliance Variant
Chr3:108869454 Henmt1 Noncoding-Transcript-Variant
Rr583357 within coordinates of
SNP C/T C C C C C T C C C C C C C
rs257355820
MGI SNP Detail
Alliance Variant
Chr3:108869472 Henmt1 Noncoding-Transcript-Variant
Rr583357 17 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C A A C C C A A C A C C C A C C C C C C C C
rs227810030
MGI SNP Detail
Alliance Variant
Chr3:108869501 Henmt1 Noncoding-Transcript-Variant
Rr583357 46 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T C T T T T
rs29690711
MGI SNP Detail
Alliance Variant
Chr3:108869559 Henmt1 Noncoding-Transcript-Variant
Rr583357 104 bp distal
SNP C/T C C C C C T C C C C C
rs29691554
MGI SNP Detail
Alliance Variant
Chr3:108869640 Henmt1 Noncoding-Transcript-Variant
Rr583357 185 bp distal
SNP A/C A A A A A A A C A C A
rs212082132
MGI SNP Detail
Alliance Variant
Chr3:108869675 Henmt1 Noncoding-Transcript-Variant
Rr583357 220 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs29691557
MGI SNP Detail
Alliance Variant
Chr3:108869687 Henmt1 Noncoding-Transcript-Variant
Rr583357 232 bp distal
SNP C/T C C C C C C C C T C T C
rs29691560
MGI SNP Detail
Alliance Variant
Chr3:108869730 Henmt1 Noncoding-Transcript-Variant
Rr583357 275 bp distal
SNP A/G G G G G G A G G A G A G
rs213851992
MGI SNP Detail
Alliance Variant
Chr3:108869748 Henmt1 Noncoding-Transcript-Variant
Rr583357 293 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs29691563
MGI SNP Detail
Alliance Variant
Chr3:108869813 Gm65815 within coordinates of
Henmt1 Noncoding-Transcript-Variant
Rr583357 358 bp distal
SNP A/G G G G G G A G G A G G A G
rs262941806
MGI SNP Detail
Alliance Variant
Chr3:108869852 Gm65815 within coordinates of
Henmt1 Noncoding-Transcript-Variant
Rr583357 397 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227104838
MGI SNP Detail
Alliance Variant
Chr3:108869886 Gm65815 within coordinates of
Henmt1 Noncoding-Transcript-Variant
Rr583357 431 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242562099
MGI SNP Detail
Alliance Variant
Chr3:108869890 Gm65815 within coordinates of
Henmt1 Noncoding-Transcript-Variant
Rr583357 435 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs256531935
MGI SNP Detail
Alliance Variant
Chr3:108869891 Gm65815 within coordinates of
Henmt1 Noncoding-Transcript-Variant
Rr583357 436 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs218379767
MGI SNP Detail
Alliance Variant
Chr3:108869919 Gm65815 within coordinates of
Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 464 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs240032525
MGI SNP Detail
Alliance Variant
Chr3:108869950 Gm65815 within coordinates of
Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 495 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G G A A A G G A G A A A G A A A A A A A G
rs29692386
MGI SNP Detail
Alliance Variant
Chr3:108870046 Gm65815 within coordinates of
Henmt1 Intron
Henmt1 Noncoding-Transcript-Variant
Rr583357 591 bp distal
SNP G/T G G G G G T G G G G G G
rs221632866
MGI SNP Detail
Chr3:108870091 Gm65815 within coordinates of
Rr583357 636 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs244697041
MGI SNP Detail
Chr3:108870093 Gm65815 within coordinates of
Rr583357 638 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs266053340
MGI SNP Detail
Chr3:108870095 Gm65815 within coordinates of
Rr583357 640 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs233063386
MGI SNP Detail
Chr3:108870145 Gm65815 within coordinates of
Rr583357 690 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A A G G G A A G A G G G A G G G A G G G
rs244972928
MGI SNP Detail
Chr3:108870151 Gm65815 within coordinates of
Rr583357 696 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C C T T T C C T C T T T C T T T C T T T
rs581650549
MGI SNP Detail
Chr3:108870270 Gm65815 within coordinates of
Rr583357 815 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G G A A A A A G A A A A A A A A
rs253331429
MGI SNP Detail
Chr3:108870288 Gm65815 within coordinates of
Rr583357 833 bp distal
SNP A/G G A
rs262978191
MGI SNP Detail
Chr3:108870302 Gm65815 within coordinates of
Rr583357 847 bp distal
SNP A/G A G
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Showing SNP(s) 1 - 100 of 139

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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