Rr583464 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr583464
regulatory region 583464
MGI:8045596

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Showing SNP(s) 1 - 47 of 47

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs215298370 MGI SNP Detail Alliance Variant	Chr3:110047150	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 1994 bp proximal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G	G	G	G
rs234030954 MGI SNP Detail Alliance Variant	Chr3:110047245	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 1899 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
rs259309782 MGI SNP Detail Alliance Variant	Chr3:110047308	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 1836 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G
rs213014105 MGI SNP Detail Alliance Variant	Chr3:110047454	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 1690 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G
rs236046293 MGI SNP Detail Alliance Variant	Chr3:110047507	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 1637 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G
rs257771799 MGI SNP Detail Alliance Variant	Chr3:110047955	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 1189 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C
rs213612353 MGI SNP Detail Alliance Variant	Chr3:110047965	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 1179 bp proximal	SNP	A/G	A	A			A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A
rs52469484 MGI SNP Detail Alliance Variant	Chr3:110048038	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 1106 bp proximal	SNP	A/G				A	A																					A						A																		G
rs585868999 MGI SNP Detail Alliance Variant	Chr3:110048069	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 1075 bp proximal	SNP	A					A		A			A				A	A	A	A			A				A					A	A				A	A				A								A				A			A	A
rs579314830 MGI SNP Detail Alliance Variant	Chr3:110048077	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 1067 bp proximal	SNP	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A		A	A	A	A	A	A	A		A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A
rs581881682 MGI SNP Detail Alliance Variant	Chr3:110048081	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 1063 bp proximal	SNP	A/C	C	C			C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	A	C	C	C	C	C	C	C			C		C				C	C	C	C	C	C	C	C	C	C	C	C	C			C	C		C
rs585618054 MGI SNP Detail Alliance Variant	Chr3:110048089	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 1055 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G	G	G	G		G	G		G		G		G	G	G	G	G	G	G	G	G	G		G	G		G	G	G	G	G
rs234795729 MGI SNP Detail Alliance Variant	Chr3:110048103	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 1041 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T		C	T	T	T	T
rs252506121 MGI SNP Detail Alliance Variant	Chr3:110048265	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 879 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A
rs223119608 MGI SNP Detail Alliance Variant	Chr3:110048320	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 824 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C
rs246995945 MGI SNP Detail Alliance Variant	Chr3:110048335	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 809 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C
rs261339128 MGI SNP Detail Alliance Variant	Chr3:110048341	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 803 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T
rs579663409 MGI SNP Detail Alliance Variant	Chr3:110048347	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 797 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs220125242 MGI SNP Detail Alliance Variant	Chr3:110048390	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 754 bp proximal	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A
rs33862040 MGI SNP Detail Alliance Variant	Chr3:110048507	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 637 bp proximal	SNP	C/T				T	T											C										T						T																		C
rs256664550 MGI SNP Detail Alliance Variant	Chr3:110048514	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 630 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
rs225693839 MGI SNP Detail Alliance Variant	Chr3:110048619	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 525 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T
rs240456443 MGI SNP Detail Alliance Variant	Chr3:110048650	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583464 494 bp proximal	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A
rs257647511 MGI SNP Detail Alliance Variant	Chr3:110048681	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583463 within coordinates of Rr583464 463 bp proximal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C	C	C	C
rs235024630 MGI SNP Detail Alliance Variant	Chr3:110048687	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583463 within coordinates of Rr583464 457 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T	T	T	T	C	T	T	T	T	C	C		T	T	T	T	T	T	T	T	T	T	C	T	T	T	C	T	T	T	T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs254010105 MGI SNP Detail Alliance Variant	Chr3:110048726	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583463 within coordinates of Rr583464 418 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C
rs213440052 MGI SNP Detail Alliance Variant	Chr3:110048734	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583463 within coordinates of Rr583464 410 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C
rs227939079 MGI SNP Detail Alliance Variant	Chr3:110048848	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583463 within coordinates of Rr583464 296 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T
rs245612639 MGI SNP Detail Alliance Variant	Chr3:110048884	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583463 within coordinates of Rr583464 260 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs213574382 MGI SNP Detail Alliance Variant	Chr3:110049024	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583463 within coordinates of Rr583464 120 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A
rs234656121 MGI SNP Detail Alliance Variant	Chr3:110049145	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583463 within coordinates of Rr583464 within coordinates of	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C
rs30459646 MGI SNP Detail Alliance Variant	Chr3:110049287	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583463 within coordinates of Rr583464 122 bp distal	SNP	C/T				T	T											C										T						T				C														C
rs219187903 MGI SNP Detail Alliance Variant	Chr3:110049404	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583463 within coordinates of Rr583464 239 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	T	C	C	C	C	T	C		C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
rs241659722 MGI SNP Detail Alliance Variant	Chr3:110049466	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583463 within coordinates of Rr583464 301 bp distal	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A
rs255975862 MGI SNP Detail Alliance Variant	Chr3:110049558	Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583463 within coordinates of Rr583464 393 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A
rs219799045 MGI SNP Detail Alliance Variant	Chr3:110049582	Cpgi13719 within coordinates of Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583463 within coordinates of Rr583464 417 bp distal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C
rs31192184 MGI SNP Detail Alliance Variant	Chr3:110049675	Cpgi13719 within coordinates of Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583463 within coordinates of Rr583464 510 bp distal	SNP	A/T				A	A											T										A
rs250737345 MGI SNP Detail Alliance Variant	Chr3:110050048	Cpgi13719 within coordinates of Ntng1 Intron Ntng1 mRNA-UTR Ntng1 Noncoding-Transcript-Variant Rr583463 within coordinates of Rr583464 883 bp distal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C
rs240316352 MGI SNP Detail Alliance Variant	Chr3:110050167	Cpgi13719 within coordinates of Ntng1 Intron Ntng1 Noncoding-Transcript-Variant Rr583463 within coordinates of Rr583464 1002 bp distal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	T	A	A	A	A	A	A	A	T	A	A	A	A	T	A		A	A	A	A	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A
rs30563598 MGI SNP Detail Alliance Variant	Chr3:110050461	Cpgi13719 within coordinates of Ntng1 mRNA-UTR Ntng1 Noncoding-Transcript-Variant Rr583464 1296 bp distal Rr583467 within coordinates of	SNP	A/G					G											A										G						G																		A
rs583136060 MGI SNP Detail Alliance Variant	Chr3:110050493	Cpgi13719 within coordinates of Ntng1 mRNA-UTR Ntng1 Noncoding-Transcript-Variant Rr583464 1328 bp distal Rr583467 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
rs234259215 MGI SNP Detail Alliance Variant	Chr3:110050546	Cpgi13719 within coordinates of Ntng1 mRNA-UTR Ntng1 Noncoding-Transcript-Variant Rr583464 1381 bp distal Rr583467 within coordinates of	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	T	C	C	C	C		C	C	C	C	C	C	T	C	C	C	C	C	C	C		C	C	C	C
rs250239475 MGI SNP Detail Alliance Variant	Chr3:110050925	Cpgi13719 within coordinates of Ntng1 mRNA-UTR Ntng1 Noncoding-Transcript-Variant Rr583464 1760 bp distal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T	T	T	T
rs262003567 MGI SNP Detail Alliance Variant	Chr3:110050930	Cpgi13719 within coordinates of Ntng1 mRNA-UTR Ntng1 Noncoding-Transcript-Variant Rr583464 1765 bp distal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C	C	C	C
rs228457598 MGI SNP Detail Alliance Variant	Chr3:110050994	Cpgi13719 within coordinates of Ntng1 mRNA-UTR Ntng1 Noncoding-Transcript-Variant Rr583464 1829 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G		G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G
rs245843253 MGI SNP Detail Alliance Variant	Chr3:110051011	Cpgi13719 within coordinates of Ntng1 Coding-NonSynonymous Ntng1 mRNA-UTR Ntng1 Noncoding-Transcript-Variant Rr583464 1846 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
rs257722644 MGI SNP Detail Alliance Variant	Chr3:110051041	Cpgi13719 within coordinates of Ntng1 Coding-NonSynonymous Ntng1 mRNA-UTR Ntng1 Noncoding-Transcript-Variant Rr583464 1876 bp distal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C	C	G	C	C	C	C	G	C	C	C	C	G	G		C	C	C	C	C	C	G	C	C	C	G	C	C	C	G	C	C	C	G

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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