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Mouse SNP Summary
Symbol
Name
ID
Rr584230
regulatory region 584230
MGI:8046362

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs46048314
MGI SNP Detail
Alliance Variant
Chr3:121888497 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 2000 bp proximal
SNP A/T A T A T
rs48033366
MGI SNP Detail
Alliance Variant
Chr3:121888537 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1960 bp proximal
SNP A/C A C A C
rs51454910
MGI SNP Detail
Alliance Variant
Chr3:121888591 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1906 bp proximal
SNP A/G A G A G
rs47373551
MGI SNP Detail
Alliance Variant
Chr3:121888618 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1879 bp proximal
SNP A/T T A T A
rs36284991
MGI SNP Detail
Alliance Variant
Chr3:121888654 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1843 bp proximal
SNP A/G G G G G G G A A G G G A G G A A G
rs36419345
MGI SNP Detail
Alliance Variant
Chr3:121888701 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1796 bp proximal
SNP C/T C C C C C C C T C C C T C C T C
rs36262411
MGI SNP Detail
Alliance Variant
Chr3:121888795 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584229 within coordinates of
Rr584230 1702 bp proximal
SNP A/G G G G G G G A A G G G A G G A G
rs36926616
MGI SNP Detail
Alliance Variant
Chr3:121888914 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1583 bp proximal
SNP A/G A A A A A A G G A A A G A A G A
rs36554668
MGI SNP Detail
Alliance Variant
Chr3:121888966 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1531 bp proximal
SNP A/G A A A A A A G G A A A G A A G G A
rs243627490
MGI SNP Detail
Alliance Variant
Chr3:121888981 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1516 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs47411701
MGI SNP Detail
Alliance Variant
Chr3:121889003 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1494 bp proximal
SNP C/G C G C
rs49326847
MGI SNP Detail
Alliance Variant
Chr3:121889004 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1493 bp proximal
SNP A/C A C A
rs36362828
MGI SNP Detail
Alliance Variant
Chr3:121889049 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1448 bp proximal
SNP A/G A A A A A A G A A A A A A A A
rs583707227
MGI SNP Detail
Alliance Variant
Chr3:121889156 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1341 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C T C C C C C C C C C C
rs586969759
MGI SNP Detail
Alliance Variant
Chr3:121889164 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1333 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T T T T T T T
rs586052473
MGI SNP Detail
Alliance Variant
Chr3:121889186 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1311 bp proximal
SNP C/T T T T C T T T T T T T T T T T T C T C T T C C C C C C T C T C T T T
rs581054688
MGI SNP Detail
Alliance Variant
Chr3:121889210 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1287 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs584739575
MGI SNP Detail
Alliance Variant
Chr3:121889230 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1267 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs579736951
MGI SNP Detail
Alliance Variant
Chr3:121889238 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1259 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs582268868
MGI SNP Detail
Alliance Variant
Chr3:121889290 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1207 bp proximal
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs584839621
MGI SNP Detail
Alliance Variant
Chr3:121889309 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1188 bp proximal
SNP C/T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs579138501
MGI SNP Detail
Alliance Variant
Chr3:121889313 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1184 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C T T C C C C C C C C C C C C C T C C C C C C C C C C
rs30705535
MGI SNP Detail
Alliance Variant
Chr3:121889387 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1110 bp proximal
SNP C/T T T C
rs579637215
MGI SNP Detail
Alliance Variant
Chr3:121889418 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1079 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30407080
MGI SNP Detail
Alliance Variant
Chr3:121889425 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 1072 bp proximal
SNP C/T T T T C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs38499287
MGI SNP Detail
Alliance Variant
Chr3:121889513 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 984 bp proximal
SNP A/G A A A A A A G A A A A A A A
rs237725478
MGI SNP Detail
Alliance Variant
Chr3:121889537 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 960 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs262446355
MGI SNP Detail
Alliance Variant
Chr3:121889552 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 945 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs219383909
MGI SNP Detail
Alliance Variant
Chr3:121889554 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 943 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230681248
MGI SNP Detail
Alliance Variant
Chr3:121889560 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 937 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs585752746
MGI SNP Detail
Alliance Variant
Chr3:121889580 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 917 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs36676741
MGI SNP Detail
Alliance Variant
Chr3:121889644 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 853 bp proximal
SNP A/G G G G G G G A A G G G A G G A G
rs247910061
MGI SNP Detail
Alliance Variant
Chr3:121889671 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 826 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222373912
MGI SNP Detail
Alliance Variant
Chr3:121889691 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 806 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs37872617
MGI SNP Detail
Alliance Variant
Chr3:121889832 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 665 bp proximal
SNP G/T T T T T T T G G T T T G T T G G T
rs30944014
MGI SNP Detail
Alliance Variant
Chr3:121889877 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 620 bp proximal
SNP A/G A A A A A A A G G A A A G A A G A
rs30063577
MGI SNP Detail
Alliance Variant
Chr3:121889922 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 575 bp proximal
SNP A/G G G G G G G G G G A G G G A G G G A G
rs244420378
MGI SNP Detail
Alliance Variant
Chr3:121889998 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 499 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs36843877
MGI SNP Detail
Alliance Variant
Chr3:121890001 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 496 bp proximal
SNP C/T T T T T T T C C T T T C T T C T
rs225360619
MGI SNP Detail
Alliance Variant
Chr3:121890151 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 346 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243869278
MGI SNP Detail
Alliance Variant
Chr3:121890160 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 337 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261333895
MGI SNP Detail
Alliance Variant
Chr3:121890176 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 321 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579937708
MGI SNP Detail
Alliance Variant
Chr3:121890193 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 304 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs583367859
MGI SNP Detail
Alliance Variant
Chr3:121890195 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 302 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233142840
MGI SNP Detail
Alliance Variant
Chr3:121890300 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 197 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258498221
MGI SNP Detail
Alliance Variant
Chr3:121890306 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 191 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215894440
MGI SNP Detail
Alliance Variant
Chr3:121890323 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 174 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs38334282
MGI SNP Detail
Alliance Variant
Chr3:121890415 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 82 bp proximal
SNP C/T T T T T T T C C T T T C T T C T
rs244479722
MGI SNP Detail
Alliance Variant
Chr3:121890437 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 60 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs37437886
MGI SNP Detail
Alliance Variant
Chr3:121890456 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 41 bp proximal
SNP A/T T T T T T T A A T T T A T T A T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47308686
MGI SNP Detail
Alliance Variant
Chr3:121890509 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP C/T T C
rs230739197
MGI SNP Detail
Alliance Variant
Chr3:121890531 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G G G A A A A A A A G A A A A A A G A A A A A A G G A A A A
rs47790862
MGI SNP Detail
Alliance Variant
Chr3:121890536 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP C/T T C
rs222383255
MGI SNP Detail
Alliance Variant
Chr3:121890559 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51074330
MGI SNP Detail
Alliance Variant
Chr3:121890586 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP A/G G A G A
rs51093001
MGI SNP Detail
Alliance Variant
Chr3:121890590 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP A/C A C A C
rs38236743
MGI SNP Detail
Alliance Variant
Chr3:121890617 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP A/T T T T T T T T A T T T A T T A A T
rs246585522
MGI SNP Detail
Alliance Variant
Chr3:121890847 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs30910992
MGI SNP Detail
Alliance Variant
Chr3:121890858 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP A/G A A A A A A A A G G A A A G A A G G A
rs31708279
MGI SNP Detail
Alliance Variant
Chr3:121890859 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP A/C A A A A C A C
rs237639614
MGI SNP Detail
Alliance Variant
Chr3:121890894 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs31334158
MGI SNP Detail
Alliance Variant
Chr3:121890913 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP A/G G G G G A G A
rs234182528
MGI SNP Detail
Alliance Variant
Chr3:121890930 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253272144
MGI SNP Detail
Alliance Variant
Chr3:121890935 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265517257
MGI SNP Detail
Alliance Variant
Chr3:121890938 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs38390190
MGI SNP Detail
Alliance Variant
Chr3:121890999 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP G/T G G G G G G T G G G G G G G
rs31594531
MGI SNP Detail
Alliance Variant
Chr3:121891017 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP A/G A A A A A A A A G G A A A G A A G G A
rs213541489
MGI SNP Detail
Alliance Variant
Chr3:121891019 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230561228
MGI SNP Detail
Alliance Variant
Chr3:121891045 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242306160
MGI SNP Detail
Alliance Variant
Chr3:121891047 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219111747
MGI SNP Detail
Alliance Variant
Chr3:121891085 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs242036394
MGI SNP Detail
Alliance Variant
Chr3:121891095 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259122373
MGI SNP Detail
Alliance Variant
Chr3:121891145 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 29 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30650306
MGI SNP Detail
Alliance Variant
Chr3:121891177 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 61 bp distal
SNP A/T A A A A T A T
rs232522727
MGI SNP Detail
Alliance Variant
Chr3:121891196 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 80 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250969501
MGI SNP Detail
Alliance Variant
Chr3:121891230 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 114 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs219127664
MGI SNP Detail
Alliance Variant
Chr3:121891299 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 183 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs237478300
MGI SNP Detail
Alliance Variant
Chr3:121891429 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 313 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs255506768
MGI SNP Detail
Alliance Variant
Chr3:121891464 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 348 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47895148
MGI SNP Detail
Alliance Variant
Chr3:121891481 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 365 bp distal
SNP C/T T T C T C
rs249607746
MGI SNP Detail
Alliance Variant
Chr3:121891494 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 378 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs263240109
MGI SNP Detail
Alliance Variant
Chr3:121891513 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 397 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs231218300
MGI SNP Detail
Alliance Variant
Chr3:121891596 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 480 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237762448
MGI SNP Detail
Alliance Variant
Chr3:121891613 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 497 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254752958
MGI SNP Detail
Alliance Variant
Chr3:121891630 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 514 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs224239358
MGI SNP Detail
Alliance Variant
Chr3:121891649 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 533 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T C T T C T T T T
rs242228084
MGI SNP Detail
Alliance Variant
Chr3:121891650 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 534 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218913836
MGI SNP Detail
Alliance Variant
Chr3:121891652 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 536 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs39013959
MGI SNP Detail
Alliance Variant
Chr3:121891654 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 538 bp distal
SNP A/G G G G G G G A G G G G G G G G
rs258168819
MGI SNP Detail
Alliance Variant
Chr3:121891692 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 576 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215302783
MGI SNP Detail
Alliance Variant
Chr3:121891756 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 640 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs38554310
MGI SNP Detail
Alliance Variant
Chr3:121891842 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 726 bp distal
SNP C/T T T T T T T C T T T T T T T
rs251027723
MGI SNP Detail
Alliance Variant
Chr3:121891865 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 749 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212678526
MGI SNP Detail
Alliance Variant
Chr3:121891890 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 774 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229731956
MGI SNP Detail
Alliance Variant
Chr3:121891932 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 816 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261133555
MGI SNP Detail
Alliance Variant
Chr3:121891952 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 836 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs33862405
MGI SNP Detail
Alliance Variant
Chr3:121891972 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 856 bp distal
SNP G/T T T T G
rs237667925
MGI SNP Detail
Alliance Variant
Chr3:121891985 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 869 bp distal
SNP C/T C T
rs38241561
MGI SNP Detail
Alliance Variant
Chr3:121892019 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 903 bp distal
SNP A/T A A A A A A T T A A A T A A T A
rs220116489
MGI SNP Detail
Alliance Variant
Chr3:121892042 Abca4 Intron
Abca4 Noncoding-Transcript-Variant
Rr584230 926 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
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Showing SNP(s) 1 - 100 of 132

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory