About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Rr585342
regulatory region 585342
MGI:8047474

<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 163

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220917078
MGI SNP Detail
Alliance Variant
Chr3:131139579 Gm66385 within coordinates of
Rr585342 1976 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242354688
MGI SNP Detail
Alliance Variant
Chr3:131139601 Gm66385 within coordinates of
Rr585342 1954 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265974949
MGI SNP Detail
Alliance Variant
Chr3:131139777 Gm66385 within coordinates of
Rr585342 1778 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs234068898
MGI SNP Detail
Alliance Variant
Chr3:131139826 Gm66385 within coordinates of
Rr585342 1729 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A G G G G G G A G G G G G G G A
rs246538416
MGI SNP Detail
Alliance Variant
Chr3:131139834 Gm66385 within coordinates of
Rr585342 1721 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49714933
MGI SNP Detail
Alliance Variant
Chr3:131139851 Gm66385 within coordinates of
Rr585342 1704 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T T T T T T T C T T T C T T T
rs226110554
MGI SNP Detail
Alliance Variant
Chr3:131139872 Gm66385 within coordinates of
Rr585342 1683 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246074397
MGI SNP Detail
Alliance Variant
Chr3:131139876 Gm66385 within coordinates of
Rr585342 1679 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs212264295
MGI SNP Detail
Alliance Variant
Chr3:131139887 Gm66385 within coordinates of
Rr585342 1668 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229597817
MGI SNP Detail
Alliance Variant
Chr3:131139910 Gm66385 within coordinates of
Rr585342 1645 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50439101
MGI SNP Detail
Alliance Variant
Chr3:131139951 Gm66385 within coordinates of
Rr585342 1604 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/C A A A A A A C A A A C A A A
rs218793984
MGI SNP Detail
Alliance Variant
Chr3:131139977 Gm66385 within coordinates of
Rr585342 1578 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs585515252
MGI SNP Detail
Alliance Variant
Chr3:131140105 Gm66385 within coordinates of
Rr585342 1450 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs578410334
MGI SNP Detail
Alliance Variant
Chr3:131140107 Gm66385 within coordinates of
Rr585342 1448 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237700556
MGI SNP Detail
Alliance Variant
Chr3:131140115 Gm66385 within coordinates of
Rr585342 1440 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs251642505
MGI SNP Detail
Alliance Variant
Chr3:131140220 Gm66385 within coordinates of
Rr585342 1335 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs213355062
MGI SNP Detail
Alliance Variant
Chr3:131140245 Gm66385 within coordinates of
Rr585342 1310 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232066148
MGI SNP Detail
Alliance Variant
Chr3:131140266 Gm66385 within coordinates of
Rr585342 1289 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248164472
MGI SNP Detail
Alliance Variant
Chr3:131140281 Gm66385 within coordinates of
Rr585342 1274 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221280378
MGI SNP Detail
Alliance Variant
Chr3:131140351 Gm66385 within coordinates of
Rr585342 1204 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs249962343
MGI SNP Detail
Alliance Variant
Chr3:131140362 Gm66385 within coordinates of
Rr585342 1193 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260810673
MGI SNP Detail
Alliance Variant
Chr3:131140366 Gm66385 within coordinates of
Rr585342 1189 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227370173
MGI SNP Detail
Alliance Variant
Chr3:131140422 Gm66385 within coordinates of
Rr585342 1133 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240701203
MGI SNP Detail
Alliance Variant
Chr3:131140505 Gm66385 within coordinates of
Rr585342 1050 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T C C C C C C T C C C C C C C
rs259951862
MGI SNP Detail
Alliance Variant
Chr3:131140549 Gm66385 within coordinates of
Rr585342 1006 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs225870744
MGI SNP Detail
Alliance Variant
Chr3:131140608 Gm66385 within coordinates of
Rr585342 947 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240061531
MGI SNP Detail
Alliance Variant
Chr3:131140619 Gm66385 within coordinates of
Rr585342 936 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs264747204
MGI SNP Detail
Alliance Variant
Chr3:131140645 Gm66385 within coordinates of
Rr585342 910 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T C C C C C C T C C C C C C C T
rs229342942
MGI SNP Detail
Alliance Variant
Chr3:131140646 Gm66385 within coordinates of
Rr585342 909 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A G G A A G A A A G A A A G A A A G
rs259503679
MGI SNP Detail
Alliance Variant
Chr3:131140650 Gm66385 within coordinates of
Rr585342 905 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A G G G G G G A G G G G G G G A
rs219674545
MGI SNP Detail
Alliance Variant
Chr3:131140654 Gm66385 within coordinates of
Rr585342 901 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs226586892
MGI SNP Detail
Alliance Variant
Chr3:131140715 Gm66385 within coordinates of
Rr585342 840 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245779007
MGI SNP Detail
Alliance Variant
Chr3:131140747 Gm66385 within coordinates of
Rr585342 808 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213323959
MGI SNP Detail
Alliance Variant
Chr3:131140825 Gm66385 within coordinates of
Rr585342 730 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs231856770
MGI SNP Detail
Alliance Variant
Chr3:131140838 Gm66385 within coordinates of
Rr585342 717 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs255210958
MGI SNP Detail
Alliance Variant
Chr3:131140883 Gm66385 within coordinates of
Rr585342 672 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs213193657
MGI SNP Detail
Alliance Variant
Chr3:131140893 Gm66385 within coordinates of
Rr585342 662 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239511942
MGI SNP Detail
Alliance Variant
Chr3:131140934 Gm66385 within coordinates of
Rr585342 621 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs45779885
MGI SNP Detail
Alliance Variant
Chr3:131140948 Gm66385 within coordinates of
Rr585342 607 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A T
rs224081192
MGI SNP Detail
Alliance Variant
Chr3:131141031 Gm66385 within coordinates of
Rr585342 524 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs240665450
MGI SNP Detail
Alliance Variant
Chr3:131141116 Gm66385 within coordinates of
Rr585342 439 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253783162
MGI SNP Detail
Alliance Variant
Chr3:131141123 Gm66385 within coordinates of
Rr585342 432 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219746493
MGI SNP Detail
Alliance Variant
Chr3:131141165 Gm66385 within coordinates of
Rr585342 390 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs239769865
MGI SNP Detail
Alliance Variant
Chr3:131141207 Gm66385 within coordinates of
Rr585342 348 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261599463
MGI SNP Detail
Alliance Variant
Chr3:131141209 Gm66385 within coordinates of
Rr585342 346 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229667724
MGI SNP Detail
Alliance Variant
Chr3:131141333 Gm66385 within coordinates of
Rr585342 222 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs49012609
MGI SNP Detail
Alliance Variant
Chr3:131141367 Gm66385 within coordinates of
Rr585342 188 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G A A A A A G A G A G A A A A A
rs266201502
MGI SNP Detail
Alliance Variant
Chr3:131141469 Gm66385 within coordinates of
Rr585342 86 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs52346474
MGI SNP Detail
Alliance Variant
Chr3:131141499 Gm66385 within coordinates of
Rr585342 56 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C T T T C T T C C C
rs245744773
MGI SNP Detail
Alliance Variant
Chr3:131141520 Gm66385 within coordinates of
Rr585342 35 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255128845
MGI SNP Detail
Alliance Variant
Chr3:131141543 Gm66385 within coordinates of
Rr585342 12 bp proximal
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs225898448
MGI SNP Detail
Alliance Variant
Chr3:131141607 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252013653
MGI SNP Detail
Alliance Variant
Chr3:131141629 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212538935
MGI SNP Detail
Alliance Variant
Chr3:131141634 Gm66385 within coordinates of
Rr585342 within coordinates of
Rr585343 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs241995192
MGI SNP Detail
Alliance Variant
Chr3:131141736 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs254710382
MGI SNP Detail
Alliance Variant
Chr3:131141778 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A A C C C C C C A C C C C C C C A
rs215030475
MGI SNP Detail
Alliance Variant
Chr3:131141947 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G G G G G G
rs234638479
MGI SNP Detail
Alliance Variant
Chr3:131141984 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A
rs251137562
MGI SNP Detail
Alliance Variant
Chr3:131141995 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs219713510
MGI SNP Detail
Alliance Variant
Chr3:131142029 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs233128344
MGI SNP Detail
Alliance Variant
Chr3:131142032 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs260922623
MGI SNP Detail
Alliance Variant
Chr3:131142049 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221656808
MGI SNP Detail
Alliance Variant
Chr3:131142056 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250588150
MGI SNP Detail
Alliance Variant
Chr3:131142114 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs264612652
MGI SNP Detail
Alliance Variant
Chr3:131142136 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs221119403
MGI SNP Detail
Alliance Variant
Chr3:131142182 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240284835
MGI SNP Detail
Alliance Variant
Chr3:131142335 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C C
rs255752269
MGI SNP Detail
Alliance Variant
Chr3:131142346 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs225877672
MGI SNP Detail
Alliance Variant
Chr3:131142387 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs582748218
MGI SNP Detail
Alliance Variant
Chr3:131142392 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs586293430
MGI SNP Detail
Alliance Variant
Chr3:131142397 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs248967644
MGI SNP Detail
Alliance Variant
Chr3:131142499 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264769587
MGI SNP Detail
Alliance Variant
Chr3:131142503 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs232834350
MGI SNP Detail
Alliance Variant
Chr3:131142524 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs259820319
MGI SNP Detail
Alliance Variant
Chr3:131142526 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215136657
MGI SNP Detail
Alliance Variant
Chr3:131142541 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs234802463
MGI SNP Detail
Alliance Variant
Chr3:131142546 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244870410
MGI SNP Detail
Alliance Variant
Chr3:131142561 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214290636
MGI SNP Detail
Alliance Variant
Chr3:131142578 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580182239
MGI SNP Detail
Alliance Variant
Chr3:131142623 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583737014
MGI SNP Detail
Alliance Variant
Chr3:131142637 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G
rs239126587
MGI SNP Detail
Alliance Variant
Chr3:131142741 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs255677541
MGI SNP Detail
Alliance Variant
Chr3:131142750 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs50367783
MGI SNP Detail
Alliance Variant
Chr3:131142757 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP T T
rs239549022
MGI SNP Detail
Alliance Variant
Chr3:131142783 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253278693
MGI SNP Detail
Alliance Variant
Chr3:131142827 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs221086110
MGI SNP Detail
Alliance Variant
Chr3:131142876 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T
rs240451610
MGI SNP Detail
Alliance Variant
Chr3:131142879 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs255660901
MGI SNP Detail
Alliance Variant
Chr3:131142917 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49021100
MGI SNP Detail
Alliance Variant
Chr3:131142937 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/C C C C C C C A C C C A C C C
rs243692011
MGI SNP Detail
Alliance Variant
Chr3:131142960 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs261820842
MGI SNP Detail
Alliance Variant
Chr3:131142977 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs233832809
MGI SNP Detail
Alliance Variant
Chr3:131143007 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs248041745
MGI SNP Detail
Alliance Variant
Chr3:131143057 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs258827079
MGI SNP Detail
Alliance Variant
Chr3:131143062 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs228059912
MGI SNP Detail
Alliance Variant
Chr3:131143076 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs244984607
MGI SNP Detail
Alliance Variant
Chr3:131143081 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214246586
MGI SNP Detail
Alliance Variant
Chr3:131143096 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs227521126
MGI SNP Detail
Alliance Variant
Chr3:131143123 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs586031636
MGI SNP Detail
Alliance Variant
Chr3:131143143 Gm66385 within coordinates of
Rr585342 within coordinates of
Sgms2 Intron
Sgms2 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 163

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/25/2025
MGI 6.24
The Jackson Laboratory