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Mouse SNP Summary
Symbol
Name
ID 		Rr585560
regulatory region 585560
MGI:8047692

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235508131
MGI SNP Detail
Alliance Variant		 Chr3:133229007 Rr585560 1921 bp proximal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30770326
MGI SNP Detail
Alliance Variant		 Chr3:133229043 Rr585560 1885 bp proximal
Tet2 Intron
 SNP A/G A A A A A A A A A A A A G A A
rs217378671
MGI SNP Detail
Alliance Variant		 Chr3:133229134 Rr585560 1794 bp proximal
Tet2 Intron
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs585535790
MGI SNP Detail
Alliance Variant		 Chr3:133229153 Rr585560 1775 bp proximal
Tet2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232788371
MGI SNP Detail
Alliance Variant		 Chr3:133229237 Rr585560 1691 bp proximal
Tet2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs251940686
MGI SNP Detail
Alliance Variant		 Chr3:133229245 Rr585560 1683 bp proximal
Tet2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C T C C C T C C T T T C T C C C T C C C T C C C T
rs219244169
MGI SNP Detail
Alliance Variant		 Chr3:133229294 Rr585560 1634 bp proximal
Tet2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246773666
MGI SNP Detail
Alliance Variant		 Chr3:133229295 Rr585560 1633 bp proximal
Tet2 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs255261277
MGI SNP Detail
Alliance Variant		 Chr3:133229309 Rr585560 1619 bp proximal
Tet2 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs220856966
MGI SNP Detail
Alliance Variant		 Chr3:133229348 Rr585560 1580 bp proximal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246979589
MGI SNP Detail
Alliance Variant		 Chr3:133229352 Rr585560 1576 bp proximal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260984179
MGI SNP Detail
Alliance Variant		 Chr3:133229392 Rr585560 1536 bp proximal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs227046874
MGI SNP Detail
Alliance Variant		 Chr3:133229471 Rr585560 1457 bp proximal
Tet2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T C T T T C T T C C C T C T T T C T T T C T T T C
rs30770328
MGI SNP Detail
Alliance Variant		 Chr3:133229494 Rr585560 1434 bp proximal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G A G
rs578435383
MGI SNP Detail
Alliance Variant		 Chr3:133229593 Rr585560 1335 bp proximal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582054960
MGI SNP Detail
Alliance Variant		 Chr3:133229624 Rr585560 1304 bp proximal
Tet2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260318167
MGI SNP Detail
Alliance Variant		 Chr3:133229666 Rr585560 1262 bp proximal
Tet2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T C C T T T C T C C C T C C C T C C C T
rs230302720
MGI SNP Detail
Alliance Variant		 Chr3:133229714 Rr585560 1214 bp proximal
Tet2 Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A T A A A A A A T A A A A A A A T A A A A
rs30770330
MGI SNP Detail
Alliance Variant		 Chr3:133229785 Rr375761 within coordinates of
Rr585560 1143 bp proximal
Tet2 Intron
 SNP C/T C C C C C C T C C C T C C T C
rs212186698
MGI SNP Detail
Alliance Variant		 Chr3:133229870 Rr375761 within coordinates of
Rr585560 1058 bp proximal
Tet2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229402392
MGI SNP Detail
Alliance Variant		 Chr3:133229908 Rr375761 within coordinates of
Rr585560 1020 bp proximal
Tet2 Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs246853690
MGI SNP Detail
Alliance Variant		 Chr3:133229922 Rr375761 within coordinates of
Rr585560 1006 bp proximal
Tet2 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30770332
MGI SNP Detail
Alliance Variant		 Chr3:133229942 Rr375761 within coordinates of
Rr585560 986 bp proximal
Tet2 Intron
 SNP A/C C C C C C C C C C A C C A C
rs232935697
MGI SNP Detail
Alliance Variant		 Chr3:133229943 Rr375761 within coordinates of
Rr585560 985 bp proximal
Tet2 Intron
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585475634
MGI SNP Detail
Alliance Variant		 Chr3:133229951 Rr375761 within coordinates of
Rr585560 977 bp proximal
Tet2 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251910796
MGI SNP Detail
Alliance Variant		 Chr3:133229999 Rr375761 within coordinates of
Rr585560 929 bp proximal
Tet2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213648071
MGI SNP Detail
Alliance Variant		 Chr3:133230035 Rr375761 within coordinates of
Rr585560 893 bp proximal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236869982
MGI SNP Detail
Alliance Variant		 Chr3:133230069 Rr375761 within coordinates of
Rr585560 859 bp proximal
Tet2 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs260823854
MGI SNP Detail
Alliance Variant		 Chr3:133230447 Rr375761 within coordinates of
Rr585560 481 bp proximal
Tet2 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G G G A A A A A G A A A A A A A G
rs221333943
MGI SNP Detail
Alliance Variant		 Chr3:133230489 Rr375761 within coordinates of
Rr585560 439 bp proximal
Tet2 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs241765577
MGI SNP Detail
Alliance Variant		 Chr3:133230505 Rr375761 within coordinates of
Rr585560 423 bp proximal
Tet2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs255056783
MGI SNP Detail
Alliance Variant		 Chr3:133230559 Rr375761 within coordinates of
Rr585560 369 bp proximal
Tet2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220706533
MGI SNP Detail
Alliance Variant		 Chr3:133230646 Rr375761 within coordinates of
Rr585560 282 bp proximal
Tet2 Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs241010389
MGI SNP Detail
Alliance Variant		 Chr3:133230648 Rr375761 within coordinates of
Rr585560 280 bp proximal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260286225
MGI SNP Detail
Alliance Variant		 Chr3:133230719 Rr375761 within coordinates of
Rr585560 209 bp proximal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222667362
MGI SNP Detail
Alliance Variant		 Chr3:133230788 Rr375761 within coordinates of
Rr585560 140 bp proximal
Tet2 Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A T A A A T A A A A A A T A A A A A A A A A A A A
rs244626175
MGI SNP Detail
Alliance Variant		 Chr3:133230799 Rr375761 within coordinates of
Rr585560 129 bp proximal
Tet2 Intron
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A C A A A C A A A A A A C A A A A A A A A A A A A
rs264711419
MGI SNP Detail
Alliance Variant		 Chr3:133230831 Rr375761 within coordinates of
Rr585560 97 bp proximal
Tet2 Intron
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs229182965
MGI SNP Detail
Alliance Variant		 Chr3:133230849 Rr375761 within coordinates of
Rr585560 79 bp proximal
Tet2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T C T T T C T T T T T T C T T T T T T T C T T T T
rs246827011
MGI SNP Detail
Alliance Variant		 Chr3:133230850 Rr375761 within coordinates of
Rr585560 78 bp proximal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs260083911
MGI SNP Detail
Alliance Variant		 Chr3:133230869 Rr375761 within coordinates of
Rr585560 59 bp proximal
Tet2 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A G A A A G A A A A A A G A A A A A A A A A A A
rs226886090
MGI SNP Detail
Alliance Variant		 Chr3:133230874 Rr375761 within coordinates of
Rr585560 54 bp proximal
Tet2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs246094907
MGI SNP Detail
Alliance Variant		 Chr3:133230889 Rr375761 within coordinates of
Rr585560 39 bp proximal
Tet2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213723120
MGI SNP Detail
Alliance Variant		 Chr3:133230899 Rr375761 within coordinates of
Rr585560 29 bp proximal
Tet2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238953912
MGI SNP Detail
Alliance Variant		 Chr3:133230900 Rr375761 within coordinates of
Rr585560 28 bp proximal
Tet2 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249126616
MGI SNP Detail
Alliance Variant		 Chr3:133230930 Rr375761 within coordinates of
Rr585560 within coordinates of
Tet2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213065610
MGI SNP Detail
Alliance Variant		 Chr3:133230933 Rr375761 within coordinates of
Rr585560 within coordinates of
Tet2 Intron
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs239396476
MGI SNP Detail
Alliance Variant		 Chr3:133230940 Rr375761 within coordinates of
Rr585560 within coordinates of
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255008986
MGI SNP Detail
Alliance Variant		 Chr3:133230945 Rr375761 within coordinates of
Rr585560 within coordinates of
Tet2 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220859328
MGI SNP Detail
Alliance Variant		 Chr3:133230969 Rr375761 within coordinates of
Rr585560 within coordinates of
Tet2 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234438134
MGI SNP Detail
Alliance Variant		 Chr3:133231118 Rr375761 within coordinates of
Rr585560 within coordinates of
Tet2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250880918
MGI SNP Detail
Alliance Variant		 Chr3:133231187 Rr375761 within coordinates of
Rr585560 within coordinates of
Tet2 Intron
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs223025967
MGI SNP Detail
Alliance Variant		 Chr3:133231203 Rr375761 within coordinates of
Rr585560 within coordinates of
Tet2 Intron
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs247271913
MGI SNP Detail
Alliance Variant		 Chr3:133231295 Rr375761 within coordinates of
Rr585560 71 bp distal
Tet2 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261737706
MGI SNP Detail
Alliance Variant		 Chr3:133231336 Rr585560 112 bp distal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221403424
MGI SNP Detail
Alliance Variant		 Chr3:133231364 Rr585560 140 bp distal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs241104971
MGI SNP Detail
Alliance Variant		 Chr3:133231427 Rr585560 203 bp distal
Tet2 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs260047692
MGI SNP Detail
Alliance Variant		 Chr3:133231587 Rr585560 363 bp distal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227032621
MGI SNP Detail
Alliance Variant		 Chr3:133231672 Rr585560 448 bp distal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246150755
MGI SNP Detail
Alliance Variant		 Chr3:133231692 Rr585560 468 bp distal
Tet2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265079829
MGI SNP Detail
Alliance Variant		 Chr3:133231700 Rr585560 476 bp distal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30770333
MGI SNP Detail
Alliance Variant		 Chr3:133231828 Rr585560 604 bp distal
Tet2 Intron
 SNP G/T G G G G G G T G G G T G G T G
rs30771335
MGI SNP Detail
Alliance Variant		 Chr3:133231859 Rr585560 635 bp distal
Tet2 Intron
 SNP A/G G G G G G G A G G G A G G A G
rs212830577
MGI SNP Detail
Alliance Variant		 Chr3:133231922 Rr585560 698 bp distal
Tet2 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228472174
MGI SNP Detail
Alliance Variant		 Chr3:133232020 Rr585560 796 bp distal
Tet2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248717425
MGI SNP Detail
Alliance Variant		 Chr3:133232122 Rr585560 898 bp distal
Tet2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215070714
MGI SNP Detail
Alliance Variant		 Chr3:133232141 Rr585560 917 bp distal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234504174
MGI SNP Detail
Alliance Variant		 Chr3:133232228 Rr585560 1004 bp distal
Tet2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs256885346
MGI SNP Detail
Alliance Variant		 Chr3:133232238 Rr585560 1014 bp distal
Tet2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs214716801
MGI SNP Detail
Alliance Variant		 Chr3:133232239 Rr585560 1015 bp distal
Tet2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs234355657
MGI SNP Detail
Alliance Variant		 Chr3:133232262 Rr585560 1038 bp distal
Tet2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs261177017
MGI SNP Detail
Alliance Variant		 Chr3:133232268 Rr585560 1044 bp distal
Tet2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs222193644
MGI SNP Detail
Alliance Variant		 Chr3:133232277 Rr585560 1053 bp distal
Tet2 Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs241077411
MGI SNP Detail
Alliance Variant		 Chr3:133232353 Rr585560 1129 bp distal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253399328
MGI SNP Detail
Alliance Variant		 Chr3:133232447 Rr585560 1223 bp distal
Tet2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221009161
MGI SNP Detail
Alliance Variant		 Chr3:133232569 Rr585560 1345 bp distal
Tet2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30771337
MGI SNP Detail
Alliance Variant		 Chr3:133232684 Rr585560 1460 bp distal
Tet2 Intron
 SNP C/G G G G G G G C G G G C G G C G
rs262471808
MGI SNP Detail
Alliance Variant		 Chr3:133232767 Rr585560 1543 bp distal
Tet2 Intron
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs231234128
MGI SNP Detail
Alliance Variant		 Chr3:133232805 Rr585560 1581 bp distal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241346733
MGI SNP Detail
Alliance Variant		 Chr3:133232818 Rr585560 1594 bp distal
Tet2 Intron
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs264852119
MGI SNP Detail
Alliance Variant		 Chr3:133232823 Rr585560 1599 bp distal
Tet2 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs228508448
MGI SNP Detail
Alliance Variant		 Chr3:133232862 Rr585560 1638 bp distal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248781199
MGI SNP Detail
Alliance Variant		 Chr3:133232895 Rr585560 1671 bp distal
Tet2 Intron
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs215033891
MGI SNP Detail
Alliance Variant		 Chr3:133232932 Rr585560 1708 bp distal
Tet2 Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs228013476
MGI SNP Detail
Alliance Variant		 Chr3:133232994 Rr585560 1770 bp distal
Tet2 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254943478
MGI SNP Detail
Alliance Variant		 Chr3:133233132 Rr585560 1908 bp distal
Tet2 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs214538697
MGI SNP Detail
Alliance Variant		 Chr3:133233149 Rr585560 1925 bp distal
Tet2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580031785
MGI SNP Detail
Alliance Variant		 Chr3:133233152 Rr585560 1928 bp distal
Tet2 Intron
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs49092107
MGI SNP Detail
Alliance Variant		 Chr3:133233162 Rr585560 1938 bp distal
Tet2 Intron
 SNP G/T G T
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Showing SNP(s) 1 - 89 of 89
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory
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