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Mouse SNP Summary
Symbol
Name
ID
Rr585566
regulatory region 585566
MGI:8047698

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232516528
MGI SNP Detail
Alliance Variant
Chr3:133247376 Rr585566 1999 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs249242285
MGI SNP Detail
Alliance Variant
Chr3:133247440 Rr585566 1935 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T
rs218589186
MGI SNP Detail
Alliance Variant
Chr3:133247524 Rr585566 1851 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs238416153
MGI SNP Detail
Alliance Variant
Chr3:133247578 Rr585566 1797 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260576092
MGI SNP Detail
Alliance Variant
Chr3:133247584 Rr585566 1791 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227475004
MGI SNP Detail
Alliance Variant
Chr3:133247591 Rr585566 1784 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245706303
MGI SNP Detail
Alliance Variant
Chr3:133247611 Rr585566 1764 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265787347
MGI SNP Detail
Alliance Variant
Chr3:133247655 Rr585566 1720 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs225448737
MGI SNP Detail
Alliance Variant
Chr3:133247726 Rr585566 1649 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs238574191
MGI SNP Detail
Alliance Variant
Chr3:133247727 Rr585566 1648 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs253941607
MGI SNP Detail
Alliance Variant
Chr3:133247774 Rr585566 1601 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs224505466
MGI SNP Detail
Alliance Variant
Chr3:133247866 Rr398035 within coordinates of
Rr585566 1509 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs259205336
MGI SNP Detail
Alliance Variant
Chr3:133247888 Rr398035 within coordinates of
Rr585566 1487 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs583688348
MGI SNP Detail
Alliance Variant
Chr3:133247940 Rr398035 within coordinates of
Rr585563 within coordinates of
Rr585566 1435 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219212398
MGI SNP Detail
Alliance Variant
Chr3:133247970 Rr398035 within coordinates of
Rr585563 within coordinates of
Rr585566 1405 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs231974418
MGI SNP Detail
Alliance Variant
Chr3:133248065 Rr398035 within coordinates of
Rr585563 within coordinates of
Rr585566 1310 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs252987653
MGI SNP Detail
Alliance Variant
Chr3:133248127 Rr585563 within coordinates of
Rr585566 1248 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213539606
MGI SNP Detail
Alliance Variant
Chr3:133248235 Rr585566 1140 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A
rs232478818
MGI SNP Detail
Alliance Variant
Chr3:133248237 Rr585566 1138 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs249399316
MGI SNP Detail
Alliance Variant
Chr3:133248242 Rr585566 1133 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A
rs212519934
MGI SNP Detail
Alliance Variant
Chr3:133248426 Rr585566 949 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs235292900
MGI SNP Detail
Alliance Variant
Chr3:133248492 Rr585566 883 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs263972970
MGI SNP Detail
Alliance Variant
Chr3:133248669 Rr585566 706 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs227100865
MGI SNP Detail
Alliance Variant
Chr3:133248709 Rr585566 666 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs248416380
MGI SNP Detail
Alliance Variant
Chr3:133248714 Rr585566 661 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259704284
MGI SNP Detail
Alliance Variant
Chr3:133248745 Rr585566 630 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G C
rs219624442
MGI SNP Detail
Alliance Variant
Chr3:133248764 Rr585566 611 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs238530048
MGI SNP Detail
Alliance Variant
Chr3:133248783 Rr585566 592 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs254084272
MGI SNP Detail
Alliance Variant
Chr3:133248940 Rr585564 within coordinates of
Rr585566 435 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224459704
MGI SNP Detail
Alliance Variant
Chr3:133248989 Rr585564 within coordinates of
Rr585566 386 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247575173
MGI SNP Detail
Alliance Variant
Chr3:133249020 Rr585564 within coordinates of
Rr585566 355 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs266160338
MGI SNP Detail
Alliance Variant
Chr3:133249103 Rr585564 within coordinates of
Rr585566 272 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C C G G G G G G G G G G G G G G
rs231588861
MGI SNP Detail
Alliance Variant
Chr3:133249281 Rr585564 within coordinates of
Rr585566 94 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A C A A C C C A C A A A A A A A C A A A C
rs258239540
MGI SNP Detail
Alliance Variant
Chr3:133249333 Gm42567 within coordinates of
Rr585564 within coordinates of
Rr585566 42 bp proximal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257395844
MGI SNP Detail
Alliance Variant
Chr3:133249398 Gm42567 within coordinates of
Rr585565 within coordinates of
Rr585566 2 bp distal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs226463199
MGI SNP Detail
Alliance Variant
Chr3:133249459 Gm42567 within coordinates of
Rr585565 within coordinates of
Rr585566 63 bp distal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243297431
MGI SNP Detail
Alliance Variant
Chr3:133249497 Gm42567 within coordinates of
Rr585565 within coordinates of
Rr585566 101 bp distal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212685780
MGI SNP Detail
Alliance Variant
Chr3:133249500 Gm42567 within coordinates of
Rr585565 within coordinates of
Rr585566 104 bp distal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241692828
MGI SNP Detail
Alliance Variant
Chr3:133249501 Gm42567 within coordinates of
Rr585565 within coordinates of
Rr585566 105 bp distal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs254342553
MGI SNP Detail
Alliance Variant
Chr3:133249531 Gm42567 within coordinates of
Rr585565 within coordinates of
Rr585566 135 bp distal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs215789702
MGI SNP Detail
Alliance Variant
Chr3:133249565 Gm42567 within coordinates of
Rr585565 within coordinates of
Rr585566 169 bp distal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs238228039
MGI SNP Detail
Alliance Variant
Chr3:133249718 Gm42567 within coordinates of
Rr585565 within coordinates of
Rr585566 322 bp distal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs263583273
MGI SNP Detail
Alliance Variant
Chr3:133249740 Gm42567 within coordinates of
Rr585565 within coordinates of
Rr585566 344 bp distal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A A A A A A
rs219590469
MGI SNP Detail
Alliance Variant
Chr3:133249891 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585565 within coordinates of
Rr585566 495 bp distal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232414780
MGI SNP Detail
Alliance Variant
Chr3:133249901 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585565 within coordinates of
Rr585566 505 bp distal
Tet2 Intron
Tet2 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs248328366
MGI SNP Detail
Alliance Variant
Chr3:133250142 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 746 bp distal
Rr585567 within coordinates of
Tet2 Intron
Tet2 mRNA-UTR
SNP A/C A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A A A A A A A C A A A A A A A C A A A
rs218773513
MGI SNP Detail
Alliance Variant
Chr3:133250184 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 788 bp distal
Rr585567 within coordinates of
Tet2 Intron
Tet2 mRNA-UTR
SNP A/C A A A A A A A A A A A A A A A A C A A C A A A C A A A A A A A A A A C A A A A A A A C A A A
rs587340530
MGI SNP Detail
Alliance Variant
Chr3:133250230 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 834 bp distal
Rr585567 within coordinates of
Tet2 Intron
Tet2 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581468851
MGI SNP Detail
Alliance Variant
Chr3:133250232 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 836 bp distal
Rr585567 within coordinates of
Tet2 Intron
Tet2 mRNA-UTR
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs585166241
MGI SNP Detail
Alliance Variant
Chr3:133250297 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 901 bp distal
Rr585567 within coordinates of
Tet2 Intron
Tet2 mRNA-UTR
SNP C/T T T T T T T T T T T T T T C T T C T T C T T T T T T T T T T T T T C T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs586121143
MGI SNP Detail
Alliance Variant
Chr3:133250314 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 918 bp distal
Rr585567 within coordinates of
Tet2 Intron
Tet2 mRNA-UTR
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs580881267
MGI SNP Detail
Alliance Variant
Chr3:133250316 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 920 bp distal
Rr585567 within coordinates of
Tet2 Intron
Tet2 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs250385764
MGI SNP Detail
Alliance Variant
Chr3:133250341 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 945 bp distal
Rr585567 within coordinates of
Tet2 Intron
Tet2 mRNA-UTR
SNP C/T T T T T T T T T T T T T T C T T C T T T C T T T T T T T T T T C T T T T T T T T T
rs264448911
MGI SNP Detail
Alliance Variant
Chr3:133250358 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 962 bp distal
Rr585567 within coordinates of
Tet2 Intron
SNP A/G A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A
rs578632331
MGI SNP Detail
Alliance Variant
Chr3:133250364 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 968 bp distal
Rr585567 within coordinates of
Tet2 Intron
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581251642
MGI SNP Detail
Alliance Variant
Chr3:133250448 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 1052 bp distal
Rr585567 within coordinates of
Tet2 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224317432
MGI SNP Detail
Alliance Variant
Chr3:133250449 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 1053 bp distal
Rr585567 within coordinates of
Tet2 Intron
SNP A/C/G A A A A A A A A A A A A A A A A G A A A A G A A A A G A A A A A A G A A A A A A A C A A A A
rs246358270
MGI SNP Detail
Alliance Variant
Chr3:133250457 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 1061 bp distal
Rr585567 within coordinates of
Tet2 Intron
SNP G/T T T T T T T T T T T T T T G T T G T T T T G T T T T G T T T T T T G T T T T T T T G T T T T
rs257549056
MGI SNP Detail
Alliance Variant
Chr3:133250496 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 1100 bp distal
Rr585567 within coordinates of
Tet2 Intron
SNP C/T T C C C C C C C C C C C C C C C C C C C C C C C C C T C T C C C C C C C C C C C C C T C C C C C T C
rs579047469
MGI SNP Detail
Alliance Variant
Chr3:133250499 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 1103 bp distal
Rr585567 within coordinates of
Tet2 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T T C C C C C C C C C C C C C C
rs226424429
MGI SNP Detail
Alliance Variant
Chr3:133250583 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 1187 bp distal
Rr585567 within coordinates of
Tet2 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243452560
MGI SNP Detail
Alliance Variant
Chr3:133250634 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 1238 bp distal
Rr585567 within coordinates of
Tet2 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256673686
MGI SNP Detail
Alliance Variant
Chr3:133250641 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 1245 bp distal
Rr585567 within coordinates of
Tet2 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232880944
MGI SNP Detail
Alliance Variant
Chr3:133250694 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 1298 bp distal
Rr585567 within coordinates of
Tet2 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259927994
MGI SNP Detail
Alliance Variant
Chr3:133250718 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 1322 bp distal
Rr585567 within coordinates of
Tet2 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215278999
MGI SNP Detail
Alliance Variant
Chr3:133250731 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 1335 bp distal
Rr585567 within coordinates of
Tet2 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240626226
MGI SNP Detail
Alliance Variant
Chr3:133250762 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 1366 bp distal
Rr585567 within coordinates of
Tet2 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs246307884
MGI SNP Detail
Alliance Variant
Chr3:133250840 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 1444 bp distal
Rr585567 within coordinates of
Tet2 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs214034724
MGI SNP Detail
Alliance Variant
Chr3:133250869 Cpgi13849 within coordinates of
Gm42567 within coordinates of
Rr585566 1473 bp distal
Rr585568 within coordinates of
Tet2 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs232473864
MGI SNP Detail
Alliance Variant
Chr3:133250897 Gm42567 within coordinates of
Rr585566 1501 bp distal
Rr585568 within coordinates of
Tet2 mRNA-UTR
Tssr35768 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs248383822
MGI SNP Detail
Chr3:133251013 Gm42567 within coordinates of
Rr585566 1617 bp distal
Rr585568 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A G A A A A
rs221435823
MGI SNP Detail
Chr3:133251018 Gm42567 within coordinates of
Rr585566 1622 bp distal
Rr585568 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs239639847
MGI SNP Detail
Chr3:133251062 Gm42567 within coordinates of
Rr585566 1666 bp distal
Rr585568 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G T G G G G G G T G G G G G G G G G G G G
rs264330534
MGI SNP Detail
Chr3:133251066 Gm42567 within coordinates of
Rr585566 1670 bp distal
Rr585568 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs224265181
MGI SNP Detail
Chr3:133251120 Gm42567 within coordinates of
Rr585566 1724 bp distal
Rr585568 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249248140
MGI SNP Detail
Chr3:133251181 Gm42567 within coordinates of
Rr585566 1785 bp distal
Rr585568 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs251190558
MGI SNP Detail
Chr3:133251234 Gm42567 within coordinates of
Rr585566 1838 bp distal
Rr585568 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs220213699
MGI SNP Detail
Chr3:133251256 Gm42567 within coordinates of
Rr585566 1860 bp distal
Rr585568 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs237186712
MGI SNP Detail
Chr3:133251368 Gm42567 within coordinates of
Rr585566 1972 bp distal
Rr585568 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs256634488
MGI SNP Detail
Chr3:133251372 Gm42567 within coordinates of
Rr585566 1976 bp distal
Rr585568 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T G T T T T
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Showing SNP(s) 1 - 80 of 80

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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