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Mouse SNP Summary
Symbol
Name
ID
Rr586189
regulatory region 586189
MGI:8048321

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260999543
MGI SNP Detail
Chr3:138445970 Rr586189 1997 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T C C T T T T T T T C T T T T
rs30997871
MGI SNP Detail
Chr3:138445992 Rr586189 1975 bp proximal
SNP A/G A G G A G A
rs244080003
MGI SNP Detail
Chr3:138446024 Rr586189 1943 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T C C T T T T T T T C T T T T
rs211809024
MGI SNP Detail
Chr3:138446085 Rr586189 1882 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G A A G G G G G G G A G G G G
rs230786011
MGI SNP Detail
Chr3:138446119 Rr586189 1848 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G A A G G G G G G G G G G G G
rs255034048
MGI SNP Detail
Chr3:138446131 Rr586189 1836 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G A A G G G G G G G A G G G G
rs216712501
MGI SNP Detail
Chr3:138446144 Rr586189 1823 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239911493
MGI SNP Detail
Chr3:138446178 Rr586189 1789 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T C C T T T T T T T C T T T T
rs258751088
MGI SNP Detail
Chr3:138446246 Rr586189 1721 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A T T A A A A A A A T A A A A
rs217383242
MGI SNP Detail
Chr3:138446287 Rr586189 1680 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G A A G G G G G G G G G G G G
rs234360071
MGI SNP Detail
Chr3:138446288 Rr586189 1679 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249072375
MGI SNP Detail
Chr3:138446301 Rr586189 1666 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218074555
MGI SNP Detail
Chr3:138446428 Rr586189 1539 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs244510449
MGI SNP Detail
Chr3:138446526 Rr586189 1441 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262156251
MGI SNP Detail
Chr3:138446533 Rr586189 1434 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225363702
MGI SNP Detail
Chr3:138446547 Rr586189 1420 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248386860
MGI SNP Detail
Chr3:138446597 Rr586189 1370 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261537984
MGI SNP Detail
Chr3:138446629 Rr586189 1338 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228378660
MGI SNP Detail
Chr3:138446643 Rr586189 1324 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237692585
MGI SNP Detail
Chr3:138446726 Rr586189 1241 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255828199
MGI SNP Detail
Chr3:138446822 Rr586189 1145 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs230894866
MGI SNP Detail
Chr3:138446825 Rr586189 1142 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs250610816
MGI SNP Detail
Chr3:138446827 Rr586189 1140 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs216995525
MGI SNP Detail
Chr3:138446839 Rr586189 1128 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs231506526
MGI SNP Detail
Chr3:138446865 Rr586189 1102 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T A A T T T T T T T A T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247436611
MGI SNP Detail
Chr3:138446869 Rr586189 1098 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216603792
MGI SNP Detail
Chr3:138446873 Rr586189 1094 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234433127
MGI SNP Detail
Chr3:138446882 Rr586189 1085 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248976816
MGI SNP Detail
Chr3:138446883 Rr586189 1084 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212235824
MGI SNP Detail
Chr3:138446912 Rr586189 1055 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A T T A A A A A A A T A A A A
rs239162848
MGI SNP Detail
Chr3:138446969 Rr586189 998 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A T T A A A A A A A T A A A A
rs31643279
MGI SNP Detail
Chr3:138447041 Rr586189 926 bp proximal
SNP C/T T T C T C
rs225555793
MGI SNP Detail
Chr3:138447062 Rr586189 905 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30513337
MGI SNP Detail
Chr3:138447110 Rr586189 857 bp proximal
SNP C/T C C T C T
rs255627192
MGI SNP Detail
Chr3:138447149 Rr586189 818 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs223027216
MGI SNP Detail
Chr3:138447300 Rr586189 667 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G C C G G G G G G G C G G G G
rs237781481
MGI SNP Detail
Chr3:138447325 Rr586189 642 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C T T C C C C C C C C C C C C
rs255724937
MGI SNP Detail
Chr3:138447343 Rr586189 624 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs230722010
MGI SNP Detail
Chr3:138447372 Rr586189 595 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs245718627
MGI SNP Detail
Chr3:138447381 Rr586189 586 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263443033
MGI SNP Detail
Chr3:138447440 Rr586189 527 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T C C T T T T T T T T T T T T
rs231979052
MGI SNP Detail
Chr3:138447484 Cpgi13879 within coordinates of
Rr586188 within coordinates of
Rr586189 483 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247275201
MGI SNP Detail
Alliance Variant
Chr3:138447643 Cpgi13879 within coordinates of
Rr586188 within coordinates of
Rr586189 324 bp proximal
Tspan5 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs259022152
MGI SNP Detail
Alliance Variant
Chr3:138447653 Cpgi13879 within coordinates of
Rr586188 within coordinates of
Rr586189 314 bp proximal
Tspan5 mRNA-UTR
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224325570
MGI SNP Detail
Alliance Variant
Chr3:138447693 Cpgi13879 within coordinates of
Rr586188 within coordinates of
Rr586189 274 bp proximal
Tspan5 mRNA-UTR
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G A A G G G G G G G G G G G
rs243172777
MGI SNP Detail
Alliance Variant
Chr3:138447725 Cpgi13879 within coordinates of
Rr586188 within coordinates of
Rr586189 242 bp proximal
Tspan5 mRNA-UTR
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs212316766
MGI SNP Detail
Alliance Variant
Chr3:138447758 Cpgi13879 within coordinates of
Rr586188 within coordinates of
Rr586189 209 bp proximal
Tspan5 Splice-Site
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G A A G G G G G G A G G G G
rs237042108
MGI SNP Detail
Alliance Variant
Chr3:138447819 Cpgi13879 within coordinates of
Rr586188 within coordinates of
Rr586189 148 bp proximal
Tspan5 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs255514041
MGI SNP Detail
Alliance Variant
Chr3:138447827 Cpgi13879 within coordinates of
Rr586188 within coordinates of
Rr586189 140 bp proximal
Tspan5 Intron
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs216854692
MGI SNP Detail
Alliance Variant
Chr3:138447889 Cpgi13879 within coordinates of
Rr586188 within coordinates of
Rr586189 78 bp proximal
Tspan5 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs578306396
MGI SNP Detail
Alliance Variant
Chr3:138448099 Cpgi13879 within coordinates of
Rr586189 within coordinates of
Rr586190 within coordinates of
Tspan5 Intron
Tspan5 mRNA-UTR
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs234269227
MGI SNP Detail
Alliance Variant
Chr3:138448157 Cpgi13879 within coordinates of
Rr586189 within coordinates of
Tspan5 Intron
Tspan5 mRNA-UTR
Tspan5 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T
rs255515811
MGI SNP Detail
Alliance Variant
Chr3:138448569 Cpgi13879 within coordinates of
Rr586189 within coordinates of
Tspan5 Intron
Tspan5 mRNA-UTR
Tspan5 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs256443713
MGI SNP Detail
Alliance Variant
Chr3:138448610 Cpgi13879 within coordinates of
Rr586189 within coordinates of
Tspan5 Intron
Tspan5 mRNA-UTR
Tspan5 Noncoding-Transcript-Variant
SNP C/G C G
rs52568084
MGI SNP Detail
Alliance Variant
Chr3:138448727 Cpgi13879 within coordinates of
Rr586189 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP T T T T
rs249966667
MGI SNP Detail
Alliance Variant
Chr3:138448739 Cpgi13879 within coordinates of
Rr586189 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222768608
MGI SNP Detail
Alliance Variant
Chr3:138448740 Cpgi13879 within coordinates of
Rr586189 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242689423
MGI SNP Detail
Alliance Variant
Chr3:138448751 Cpgi13879 within coordinates of
Rr586189 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233428753
MGI SNP Detail
Alliance Variant
Chr3:138448942 Cpgi13879 within coordinates of
Rr367566 within coordinates of
Rr586189 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP G/T G T
rs30022019
MGI SNP Detail
Alliance Variant
Chr3:138448983 Cpgi13879 within coordinates of
Rr367566 within coordinates of
Rr586189 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A A G G A G A
rs241486414
MGI SNP Detail
Alliance Variant
Chr3:138449158 Cpgi13879 within coordinates of
Rr586189 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258818007
MGI SNP Detail
Alliance Variant
Chr3:138449322 Cpgi13879 within coordinates of
Rr586189 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs224389059
MGI SNP Detail
Alliance Variant
Chr3:138449378 Rr586189 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G A A G G G G G G G G G G G G
rs242300782
MGI SNP Detail
Alliance Variant
Chr3:138449535 Rr586189 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C T T C C C C C C C C C C C C
rs262751421
MGI SNP Detail
Alliance Variant
Chr3:138449551 Rr586189 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T C C T T T T T T T C T T T T
rs231269962
MGI SNP Detail
Alliance Variant
Chr3:138449625 Rr586189 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250746061
MGI SNP Detail
Alliance Variant
Chr3:138449644 Rr586189 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A T T A A A A A A A A A A A A
rs30315792
MGI SNP Detail
Alliance Variant
Chr3:138449693 Rr586189 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/C C C A C C
rs249082578
MGI SNP Detail
Alliance Variant
Chr3:138450068 Rr586189 72 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T C C T T T T T T T T T T T T
rs216940805
MGI SNP Detail
Alliance Variant
Chr3:138450080 Rr586189 84 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230956196
MGI SNP Detail
Alliance Variant
Chr3:138450091 Rr586189 95 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A G A A A A A G G A A A A A A A G A A A A
rs261194038
MGI SNP Detail
Alliance Variant
Chr3:138450093 Rr586189 97 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T A T T T T T A A T T T T T T T T T T T T
rs223795261
MGI SNP Detail
Alliance Variant
Chr3:138450106 Rr586189 110 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs31474332
MGI SNP Detail
Alliance Variant
Chr3:138450164 Rr586189 168 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G A G G G
rs259093078
MGI SNP Detail
Alliance Variant
Chr3:138450371 Rr586189 375 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T G G T T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30112012
MGI SNP Detail
Alliance Variant
Chr3:138450483 Rr586189 487 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/C C C A A C A C
rs241332754
MGI SNP Detail
Alliance Variant
Chr3:138450525 Rr586189 529 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G A A G G G G G G G G G G G G
rs258683029
MGI SNP Detail
Alliance Variant
Chr3:138450548 Rr586189 552 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs218572012
MGI SNP Detail
Alliance Variant
Chr3:138450589 Rr586189 593 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A C C A A A A A A A C A A A A
rs235733404
MGI SNP Detail
Alliance Variant
Chr3:138450598 Rr586189 602 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265282694
MGI SNP Detail
Alliance Variant
Chr3:138450615 Rr586189 619 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A G G A A A A A A A A A A A A
rs229895736
MGI SNP Detail
Alliance Variant
Chr3:138450704 Rr586189 708 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246104648
MGI SNP Detail
Alliance Variant
Chr3:138450705 Rr586189 709 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31471232
MGI SNP Detail
Alliance Variant
Chr3:138450733 Rr586189 737 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C T C C T C
rs227372804
MGI SNP Detail
Alliance Variant
Chr3:138450781 Rr586189 785 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs248993783
MGI SNP Detail
Alliance Variant
Chr3:138450845 Rr586189 849 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A G G A A A A A A A G A A A A
rs216796809
MGI SNP Detail
Alliance Variant
Chr3:138450862 Rr586189 866 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A C C A A A A A A A A A A A A
rs225241858
MGI SNP Detail
Alliance Variant
Chr3:138450941 Rr586189 945 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A G G A A A A A A A A A A A A
rs51763265
MGI SNP Detail
Alliance Variant
Chr3:138450942 Rr586189 946 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T T T C T
rs215701429
MGI SNP Detail
Alliance Variant
Chr3:138450992 Rr586189 996 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs236537437
MGI SNP Detail
Alliance Variant
Chr3:138451050 Rr586189 1054 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs263183965
MGI SNP Detail
Alliance Variant
Chr3:138451061 Rr586189 1065 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs30858599
MGI SNP Detail
Alliance Variant
Chr3:138451094 Rr586189 1098 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/G G G C G G G
rs234822139
MGI SNP Detail
Alliance Variant
Chr3:138451108 Rr586189 1112 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs581851188
MGI SNP Detail
Alliance Variant
Chr3:138451128 Rr586189 1132 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A G G A A A A A A A A A A A A
rs252460553
MGI SNP Detail
Alliance Variant
Chr3:138451142 Rr586189 1146 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218430874
MGI SNP Detail
Alliance Variant
Chr3:138451153 Rr586189 1157 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs585655811
MGI SNP Detail
Alliance Variant
Chr3:138451159 Rr586189 1163 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A G G A A A A A A A A A A A A
rs243908877
MGI SNP Detail
Alliance Variant
Chr3:138451177 Rr586189 1181 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs257740603
MGI SNP Detail
Alliance Variant
Chr3:138451179 Rr586189 1183 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G A A G G G G G G G G G G G G
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Showing SNP(s) 1 - 100 of 115

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory