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Mouse SNP Summary
Symbol
Name
ID
Rr586202
regulatory region 586202
MGI:8048334

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31036730
MGI SNP Detail
Alliance Variant
Chr3:138511699 Rr586202 1997 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G A G G
rs585572296
MGI SNP Detail
Alliance Variant
Chr3:138511727 Rr586202 1969 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs580434982
MGI SNP Detail
Alliance Variant
Chr3:138511751 Rr586202 1945 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs582874611
MGI SNP Detail
Alliance Variant
Chr3:138511795 Rr586202 1901 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231184675
MGI SNP Detail
Alliance Variant
Chr3:138511904 Rr586202 1792 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs238814471
MGI SNP Detail
Alliance Variant
Chr3:138511918 Rr586202 1778 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257663604
MGI SNP Detail
Alliance Variant
Chr3:138511979 Rr586202 1717 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T C C T T T T T T T T T T T T
rs228130836
MGI SNP Detail
Alliance Variant
Chr3:138511982 Rr586202 1714 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A G G A A A A A A A A A A A A
rs246515165
MGI SNP Detail
Alliance Variant
Chr3:138511990 Rr586202 1706 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T C C T T T T T T T T T T T T
rs30936395
MGI SNP Detail
Alliance Variant
Chr3:138512046 Rr586202 1650 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T T T T T T T C T T T T T T T T
rs233254327
MGI SNP Detail
Alliance Variant
Chr3:138512048 Rr586202 1648 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs254560663
MGI SNP Detail
Alliance Variant
Chr3:138512055 Rr586202 1641 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30936397
MGI SNP Detail
Alliance Variant
Chr3:138512090 Rr586202 1606 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP G/T T T T T T G T T T T G T
rs586013532
MGI SNP Detail
Alliance Variant
Chr3:138512118 Rr586202 1578 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs30936399
MGI SNP Detail
Alliance Variant
Chr3:138512121 Rr586202 1575 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/T A A A A A A A T A
rs232512177
MGI SNP Detail
Alliance Variant
Chr3:138512205 Rr586202 1491 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30205290
MGI SNP Detail
Alliance Variant
Chr3:138512225 Rr586202 1471 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G A G A G A G G G G G G G G G G G
rs216239743
MGI SNP Detail
Alliance Variant
Chr3:138512257 Rr586202 1439 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232564078
MGI SNP Detail
Alliance Variant
Chr3:138512287 Rr586202 1409 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G A A G G G G G G G G G G G G
rs30936402
MGI SNP Detail
Alliance Variant
Chr3:138512442 Rr586202 1254 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T G T T G T
rs225946777
MGI SNP Detail
Alliance Variant
Chr3:138512504 Rr586202 1192 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A G G A A A A A A A G A A A A
rs241913439
MGI SNP Detail
Alliance Variant
Chr3:138512508 Rr586202 1188 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C A A C C C C C C C A C C C C
rs30937414
MGI SNP Detail
Alliance Variant
Chr3:138512542 Rr586202 1154 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A G G A G G A G A G G A G G A
rs580250224
MGI SNP Detail
Alliance Variant
Chr3:138512556 Rr586202 1140 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30937416
MGI SNP Detail
Alliance Variant
Chr3:138512682 Rr586202 1014 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A T A A T A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238878330
MGI SNP Detail
Alliance Variant
Chr3:138512702 Rr586202 994 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259909313
MGI SNP Detail
Alliance Variant
Chr3:138512816 Rr586202 880 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C T T C C C C C C C C C C C C
rs30937418
MGI SNP Detail
Alliance Variant
Chr3:138512870 Rr586202 826 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T T T T T T C T T T T
rs240618185
MGI SNP Detail
Alliance Variant
Chr3:138512912 Rr586202 784 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264449875
MGI SNP Detail
Alliance Variant
Chr3:138512913 Rr586202 783 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G A A G G G G G G G G G G G G
rs6296073
MGI SNP Detail
Alliance Variant
Chr3:138512914 Rr586202 782 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/C A A A A A A A C C A A A A A C A
rs250050598
MGI SNP Detail
Alliance Variant
Chr3:138512959 Rr586202 737 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs6296728
MGI SNP Detail
Alliance Variant
Chr3:138513040 Rr586202 656 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/C C C C C C C C A A C C C A C C A C
rs226366891
MGI SNP Detail
Alliance Variant
Chr3:138513062 Rr586202 634 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30937422
MGI SNP Detail
Alliance Variant
Chr3:138513076 Rr586202 620 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C T C C T C
rs6297276
MGI SNP Detail
Alliance Variant
Chr3:138513097 Rr586202 599 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A G
rs6297358
MGI SNP Detail
Alliance Variant
Chr3:138513133 Rr586202 563 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/G C C C C C C G G C C C C C G C
rs6297386
MGI SNP Detail
Alliance Variant
Chr3:138513155 Rr586202 541 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G A
rs233156905
MGI SNP Detail
Alliance Variant
Chr3:138513167 Rr586202 529 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs6297431
MGI SNP Detail
Alliance Variant
Chr3:138513179 Rr586202 517 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G A
rs30938205
MGI SNP Detail
Alliance Variant
Chr3:138513188 Rr586202 508 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C T C C C C C C C C
rs237039168
MGI SNP Detail
Alliance Variant
Chr3:138513197 Rr586202 499 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs6297909
MGI SNP Detail
Alliance Variant
Chr3:138513203 Rr586202 493 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C T T C C C T C C T C
rs6297931
MGI SNP Detail
Alliance Variant
Chr3:138513217 Rr586202 479 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A G G A A G
rs30938584
MGI SNP Detail
Alliance Variant
Chr3:138513249 Rr586202 447 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C T C C C C C C C C
rs6298528
MGI SNP Detail
Alliance Variant
Chr3:138513322 Rr586202 374 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C G C C C G C C G C
rs6298622
MGI SNP Detail
Alliance Variant
Chr3:138513378 Rr586202 318 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A A A A A A A G G A A A G A A G A
rs242723864
MGI SNP Detail
Alliance Variant
Chr3:138513420 Rr586202 276 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs266168268
MGI SNP Detail
Alliance Variant
Chr3:138513433 Rr586202 263 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs225811732
MGI SNP Detail
Alliance Variant
Chr3:138513435 Rr586202 261 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245073174
MGI SNP Detail
Alliance Variant
Chr3:138513479 Rr586202 217 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261626537
MGI SNP Detail
Alliance Variant
Chr3:138513494 Rr586202 202 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226225868
MGI SNP Detail
Alliance Variant
Chr3:138513511 Rr586202 185 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579717866
MGI SNP Detail
Alliance Variant
Chr3:138513568 Rr586202 128 bp proximal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs579928881
MGI SNP Detail
Alliance Variant
Chr3:138513727 Rr586202 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs244099052
MGI SNP Detail
Alliance Variant
Chr3:138513758 Rr586202 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258376259
MGI SNP Detail
Alliance Variant
Chr3:138513807 Rr586202 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs227205444
MGI SNP Detail
Alliance Variant
Chr3:138513829 Rr586202 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30938588
MGI SNP Detail
Alliance Variant
Chr3:138513884 Rr586202 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G A G G G G G A G G G A G G A G
rs30938590
MGI SNP Detail
Alliance Variant
Chr3:138513894 Rr586202 within coordinates of
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/T T T T T T T A T T T T T T T
rs235176074
MGI SNP Detail
Alliance Variant
Chr3:138513997 Rr586202 43 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251947667
MGI SNP Detail
Alliance Variant
Chr3:138514028 Rr586202 74 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30938592
MGI SNP Detail
Alliance Variant
Chr3:138514047 Rr586202 93 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A G A A G A
rs231362214
MGI SNP Detail
Alliance Variant
Chr3:138514076 Rr586202 122 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30939574
MGI SNP Detail
Alliance Variant
Chr3:138514159 Rr586202 205 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G A G A A G A A G
rs30895383
MGI SNP Detail
Alliance Variant
Chr3:138514175 Rr586202 221 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A A G G G G G A G A G G A G G A
rs30939577
MGI SNP Detail
Alliance Variant
Chr3:138514185 Rr586202 231 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T T T T T T T T C T
rs30939579
MGI SNP Detail
Alliance Variant
Chr3:138514187 Rr586202 233 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/G G G G G G G G C G G G
rs260248758
MGI SNP Detail
Alliance Variant
Chr3:138514227 Rr586202 273 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C T C C C C C C C C C C C C C C C C C C C T C C C C C C T C T C C C C C C T T C C T T T C C T C C
rs220980536
MGI SNP Detail
Alliance Variant
Chr3:138514229 Rr586202 275 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP G/T G G G G T G G G G G G G G G G G G G G G G G G G T G G G G G G T G T G G G G G G T T G G T T T G G T G G
rs30939581
MGI SNP Detail
Alliance Variant
Chr3:138514234 Rr586202 280 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A A A A A A A G A G A
rs30939583
MGI SNP Detail
Alliance Variant
Chr3:138514259 Rr586202 305 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G A G G G G A G G A A G A A G
rs220214145
MGI SNP Detail
Alliance Variant
Chr3:138514260 Rr586202 306 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs30940455
MGI SNP Detail
Alliance Variant
Chr3:138514318 Rr586202 364 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G A G G G G G G A G A A G
rs250536654
MGI SNP Detail
Alliance Variant
Chr3:138514329 Rr586202 375 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264596554
MGI SNP Detail
Alliance Variant
Chr3:138514341 Rr586202 387 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T T C
rs260429884
MGI SNP Detail
Alliance Variant
Chr3:138514346 Rr586202 392 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228692769
MGI SNP Detail
Alliance Variant
Chr3:138514354 Rr586202 400 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP G/T T G
rs30940457
MGI SNP Detail
Alliance Variant
Chr3:138514355 Rr586202 401 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/T A A T T A T T A A A A A A A A
rs254282272
MGI SNP Detail
Alliance Variant
Chr3:138514455 Rr586202 501 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G A
rs224943111
MGI SNP Detail
Alliance Variant
Chr3:138514491 Rr586202 537 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G A
rs231461251
MGI SNP Detail
Alliance Variant
Chr3:138514506 Rr586202 552 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C T C C C C C C C C C C C C C C C C C C C T C C C C C C T C T C C C C C C T T C C T T T C C T C C
rs247058842
MGI SNP Detail
Alliance Variant
Chr3:138514513 Rr586202 559 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T T T T T C T T T T T T T T T T T T T T T T C T T C T C T T T T C C C T T T T C C C C T T C C C C T C T T
rs214918256
MGI SNP Detail
Alliance Variant
Chr3:138514519 Rr586202 565 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs240186016
MGI SNP Detail
Alliance Variant
Chr3:138514531 Rr586202 577 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G A G G G G G G G G G G G G G G G G G G G A G G G G G G A G A G G G G G G A A G G A A A G G A G G
rs263680314
MGI SNP Detail
Alliance Variant
Chr3:138514544 Rr586202 590 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C T T C C C C C C C C C C C C
rs212818624
MGI SNP Detail
Alliance Variant
Chr3:138514591 Rr586202 637 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236175384
MGI SNP Detail
Alliance Variant
Chr3:138514593 Rr586202 639 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C T C C C C C C C C C C C C C C C C C C C T C C C C C C T C T C C C C C C T T C C T T C C T C C
rs30940459
MGI SNP Detail
Alliance Variant
Chr3:138514641 Rr586202 687 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G A G G A A G A A G
rs220089665
MGI SNP Detail
Alliance Variant
Chr3:138514718 Rr586202 764 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237798886
MGI SNP Detail
Alliance Variant
Chr3:138514732 Rr586202 778 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs215019281
MGI SNP Detail
Alliance Variant
Chr3:138514738 Rr586202 784 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C T
rs30561574
MGI SNP Detail
Alliance Variant
Chr3:138514793 Rr586202 839 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G A A G G G G G G A G A A G G A G G A
rs30940462
MGI SNP Detail
Alliance Variant
Chr3:138514823 Rr586202 869 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T T T C C C C C T T C C T T
rs30268287
MGI SNP Detail
Alliance Variant
Chr3:138514841 Rr586202 887 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G A G A G A A A G G G A G G A G G
rs229350847
MGI SNP Detail
Alliance Variant
Chr3:138514920 Rr586202 966 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs30941455
MGI SNP Detail
Alliance Variant
Chr3:138514951 Rr586202 997 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G A G G G G
rs30941457
MGI SNP Detail
Alliance Variant
Chr3:138514965 Rr586202 1011 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C T C C C C C T C C C T C C T C
rs225424925
MGI SNP Detail
Alliance Variant
Chr3:138515005 Rr586202 1051 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs246906796
MGI SNP Detail
Alliance Variant
Chr3:138515036 Rr586202 1082 bp distal
Tspan5 Intron
Tspan5 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 100 of 128

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory