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Mouse SNP Summary
Symbol
Name
ID 		Rr586597
regulatory region 586597
MGI:8048729

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Showing SNP(s) 1 - 58 of 58

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239832514
MGI SNP Detail
Alliance Variant		 Chr3:143903112 Gm43445 within coordinates of
Lmo4 Intron
Rr586595 within coordinates of
Rr586597 1901 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264269857
MGI SNP Detail
Alliance Variant		 Chr3:143903309 Gm43445 within coordinates of
Lmo4 Intron
Rr586595 within coordinates of
Rr586597 1704 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs220479126
MGI SNP Detail
Alliance Variant		 Chr3:143903314 Gm43445 within coordinates of
Lmo4 Intron
Rr586595 within coordinates of
Rr586597 1699 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs238269798
MGI SNP Detail
Alliance Variant		 Chr3:143903325 Gm43445 within coordinates of
Lmo4 Intron
Rr586595 within coordinates of
Rr586597 1688 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251360056
MGI SNP Detail
Alliance Variant		 Chr3:143903492 Gm43445 within coordinates of
Lmo4 Intron
Rr586595 within coordinates of
Rr586597 1521 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219492942
MGI SNP Detail
Alliance Variant		 Chr3:143903499 Gm43445 within coordinates of
Lmo4 Intron
Rr586595 within coordinates of
Rr586597 1514 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs239585790
MGI SNP Detail
Alliance Variant		 Chr3:143903806 Gm43445 within coordinates of
Lmo4 Intron
Rr586595 within coordinates of
Rr586597 1207 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A G A A A A A A A A A A A A A A A A A A
rs263093240
MGI SNP Detail
Alliance Variant		 Chr3:143903827 Gm43445 within coordinates of
Lmo4 Intron
Rr586595 within coordinates of
Rr586597 1186 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G A G G G G G G G G G G G G G G G G G G
rs584520512
MGI SNP Detail
Alliance Variant		 Chr3:143903871 Gm43445 within coordinates of
Lmo4 Intron
Rr586595 within coordinates of
Rr586597 1142 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233081583
MGI SNP Detail
Alliance Variant		 Chr3:143904248 Cpgi13893 within coordinates of
Gm43445 within coordinates of
Lmo4 Intron
Rr375847 within coordinates of
Rr586595 within coordinates of
Rr586597 765 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C C T T T T T C T T T T T T T C T T T T
rs247387273
MGI SNP Detail
Alliance Variant		 Chr3:143904325 Cpgi13893 within coordinates of
Gm43445 within coordinates of
Lmo4 Intron
Rr375847 within coordinates of
Rr586595 within coordinates of
Rr586597 688 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T T C C C C C T C C C C C C C C C C C C
rs578461797
MGI SNP Detail
Alliance Variant		 Chr3:143904328 Cpgi13893 within coordinates of
Gm43445 within coordinates of
Lmo4 Intron
Rr375847 within coordinates of
Rr586595 within coordinates of
Rr586597 685 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs266057611
MGI SNP Detail
Alliance Variant		 Chr3:143904376 Cpgi13893 within coordinates of
Gm43445 within coordinates of
Lmo4 Intron
Rr375847 within coordinates of
Rr586595 within coordinates of
Rr586597 637 bp proximal
 SNP C/G C C G G G G G C G G G G G G G G G G C G G C G G G G C G G C G C C G C C G G C G G G G G G C G G G
rs227252868
MGI SNP Detail
Alliance Variant		 Chr3:143904409 Cpgi13893 within coordinates of
Gm43445 within coordinates of
Lmo4 Intron
Rr375847 within coordinates of
Rr586595 within coordinates of
Rr586597 604 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C T C C C C C C C C C C
rs242894519
MGI SNP Detail
Alliance Variant		 Chr3:143904456 Cpgi13893 within coordinates of
Gm43445 within coordinates of
Lmo4 Intron
Rr375847 within coordinates of
Rr586595 within coordinates of
Rr586597 557 bp proximal
 SNP C/T C C T T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T C C T T T T T T T T T T T T T C
rs213439209
MGI SNP Detail
Alliance Variant		 Chr3:143904472 Cpgi13893 within coordinates of
Gm43445 within coordinates of
Lmo4 Intron
Rr375847 within coordinates of
Rr586595 within coordinates of
Rr586597 541 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs225854854
MGI SNP Detail
Alliance Variant		 Chr3:143904530 Cpgi13893 within coordinates of
Gm43445 within coordinates of
Lmo4 Intron
Rr375847 within coordinates of
Rr586595 within coordinates of
Rr586597 483 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245528741
MGI SNP Detail
Alliance Variant		 Chr3:143904607 Cpgi13893 within coordinates of
Gm43445 within coordinates of
Lmo4 Intron
Rr375847 within coordinates of
Rr586595 within coordinates of
Rr586597 406 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A A G G G G G A G G G G G G A G G G G
rs217043088
MGI SNP Detail
Alliance Variant		 Chr3:143904608 Cpgi13893 within coordinates of
Gm43445 within coordinates of
Lmo4 Intron
Rr375847 within coordinates of
Rr586595 within coordinates of
Rr586597 405 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A A T T T T T A T T T T T T T A T T T T
rs242571724
MGI SNP Detail
Alliance Variant		 Chr3:143904645 Cpgi13893 within coordinates of
Gm43445 within coordinates of
Lmo4 Intron
Rr375847 within coordinates of
Rr586595 within coordinates of
Rr586597 368 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581935258
MGI SNP Detail
Alliance Variant		 Chr3:143904698 Cpgi13893 within coordinates of
Gm43445 within coordinates of
Lmo4 Intron
Rr375847 within coordinates of
Rr586595 within coordinates of
Rr586597 315 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs261160986
MGI SNP Detail
Alliance Variant		 Chr3:143904880 Gm43445 within coordinates of
Lmo4 Intron
Rr375847 within coordinates of
Rr586595 within coordinates of
Rr586597 133 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212378956
MGI SNP Detail
Alliance Variant		 Chr3:143905013 Gm43445 within coordinates of
Lmo4 Intron
Rr375847 within coordinates of
Rr586597 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs586070180
MGI SNP Detail
Alliance Variant		 Chr3:143905033 Lmo4 Intron
Rr375847 within coordinates of
Rr586597 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C G C C C C C C C C C C C C C C C C C
rs230700557
MGI SNP Detail
Alliance Variant		 Chr3:143905049 Lmo4 Intron
Rr375847 within coordinates of
Rr586597 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580392430
MGI SNP Detail
Alliance Variant		 Chr3:143905109 Lmo4 Intron
Rr375847 within coordinates of
Rr586597 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs251418242
MGI SNP Detail
Alliance Variant		 Chr3:143905112 Lmo4 Intron
Rr375847 within coordinates of
Rr586597 within coordinates of
 SNP A/C A A C C C C C A C C C C C C C C C C C C C C C C C C A A C C C A A C C C C C C C C C C C C C A
rs582477370
MGI SNP Detail
Alliance Variant		 Chr3:143905119 Lmo4 Intron
Rr375847 within coordinates of
Rr586597 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs220455266
MGI SNP Detail
Alliance Variant		 Chr3:143905261 Lmo4 Intron
Rr375847 within coordinates of
Rr586597 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A A G G G G G A G G G G G G G G G G G G
rs240653592
MGI SNP Detail
Alliance Variant		 Chr3:143905272 Lmo4 Intron
Rr375847 within coordinates of
Rr586597 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262841973
MGI SNP Detail
Alliance Variant		 Chr3:143905418 Lmo4 Intron
Rr375847 within coordinates of
Rr586597 within coordinates of
 SNP C/G C C C G G G G G C G G G G G G G G G G G G G G G G G G G G C G C G G G G C C G G G G G G G G G G C G G G C
rs224831477
MGI SNP Detail
Alliance Variant		 Chr3:143905532 Lmo4 Intron
Rr375847 within coordinates of
Rr586597 19 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs250175961
MGI SNP Detail
Alliance Variant		 Chr3:143905584 Lmo4 Intron
Rr375847 within coordinates of
Rr586597 71 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs264408870
MGI SNP Detail
Alliance Variant		 Chr3:143905637 Lmo4 Intron
Rr375847 within coordinates of
Rr586597 124 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T T C C C C C T C C C C C C C C C C C C
rs223237039
MGI SNP Detail
Alliance Variant		 Chr3:143905654 Lmo4 Intron
Rr375847 within coordinates of
Rr586597 141 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A A G G G G G A G G G G G G G G G G G G
rs236358267
MGI SNP Detail
Alliance Variant		 Chr3:143905694 Lmo4 Intron
Rr375847 within coordinates of
Rr586597 181 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C C G G G G G C G G G G G G G G G G G G
rs255027302
MGI SNP Detail
Alliance Variant		 Chr3:143905909 Lmo4 Intron
Rr375847 within coordinates of
Rr586597 396 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs225891468
MGI SNP Detail
Alliance Variant		 Chr3:143905951 Lmo4 Intron
Rr375847 within coordinates of
Rr586597 438 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs245043308
MGI SNP Detail
Alliance Variant		 Chr3:143906041 Lmo4 Intron
Rr375847 within coordinates of
Rr586597 528 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A A C C C C C A C C C C C C C A C C C C
rs217519300
MGI SNP Detail
Alliance Variant		 Chr3:143906042 Lmo4 Intron
Rr375847 within coordinates of
Rr586597 529 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G G A A A A A G A A A A A A A G A A A A
rs30801966
MGI SNP Detail
Alliance Variant		 Chr3:143906304 Lmo4 Intron
Rr375847 within coordinates of
Rr586597 791 bp distal
Rr586598 within coordinates of
 SNP A/T A T T T
rs260574771
MGI SNP Detail
Alliance Variant		 Chr3:143906395 Lmo4 Intron
Rr375847 within coordinates of
Rr586597 882 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs52479004
MGI SNP Detail
Alliance Variant		 Chr3:143906450 Lmo4 Intron
Rr586597 937 bp distal
 SNP G G G
rs231068673
MGI SNP Detail
Alliance Variant		 Chr3:143906455 Lmo4 Intron
Rr586597 942 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31159998
MGI SNP Detail
Alliance Variant		 Chr3:143906460 Lmo4 Intron
Rr586597 947 bp distal
 SNP C/T T C C C
rs108712918
MGI SNP Detail
Alliance Variant		 Chr3:143906487 Lmo4 Intron
Rr586597 974 bp distal
 SNP G G G G
rs30758135
MGI SNP Detail
Alliance Variant		 Chr3:143906526 Lmo4 Intron
Rr586597 1013 bp distal
 SNP G/T G T T T
rs214438576
MGI SNP Detail
Alliance Variant		 Chr3:143906759 Lmo4 Intron
Rr586597 1246 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C G C C C C C G G C C C C C G C C C C C C C G C C C C
rs234179307
MGI SNP Detail
Alliance Variant		 Chr3:143906866 Lmo4 Intron
Rr586597 1353 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259617758
MGI SNP Detail
Alliance Variant		 Chr3:143906912 Lmo4 Intron
Rr586597 1399 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs225093560
MGI SNP Detail
Alliance Variant		 Chr3:143907125 Lmo4 Intron
Rr586597 1612 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs239358374
MGI SNP Detail
Alliance Variant		 Chr3:143907152 Lmo4 Intron
Rr586597 1639 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A G A A A A A A A A A A A A A A A A A A
rs264119615
MGI SNP Detail
Alliance Variant		 Chr3:143907246 Lmo4 Intron
Rr586597 1733 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G G A A A A A G A A A A A A A G A A A A
rs217951798
MGI SNP Detail
Alliance Variant		 Chr3:143907323 Lmo4 Intron
Rr586597 1810 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C C T T T T T C T T T T T T T C T T T T
rs236632640
MGI SNP Detail
Alliance Variant		 Chr3:143907338 Lmo4 Intron
Rr586597 1825 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255091105
MGI SNP Detail
Alliance Variant		 Chr3:143907352 Lmo4 Intron
Rr586597 1839 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219763029
MGI SNP Detail
Alliance Variant		 Chr3:143907376 Lmo4 Intron
Rr586597 1863 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247571550
MGI SNP Detail
Alliance Variant		 Chr3:143907378 Lmo4 Intron
Rr586597 1865 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
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Showing SNP(s) 1 - 58 of 58
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory
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