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Mouse SNP Summary
Symbol
Name
ID
Rr587452
regulatory region 587452
MGI:8049584

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs51872951
MGI SNP Detail
Alliance Variant
Chr3:151808481 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1955 bp proximal
SNP A/G A A G G
rs51001055
MGI SNP Detail
Alliance Variant
Chr3:151808503 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1933 bp proximal
SNP A/G A A G G
rs242935432
MGI SNP Detail
Alliance Variant
Chr3:151808534 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1902 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253826288
MGI SNP Detail
Alliance Variant
Chr3:151808559 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1877 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229017552
MGI SNP Detail
Alliance Variant
Chr3:151808560 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1876 bp proximal
SNP A/G A A A G G G G G A G G G G G G G G G G A A G G A G G G G A G A A G G G G G G G G G G G G G G G A G A G A A
rs253681708
MGI SNP Detail
Alliance Variant
Chr3:151808562 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1874 bp proximal
SNP C/T T T T C C C C C T C C C C C C C C C C T T C C T C C C C T C T T C C C C C C C C C C C C C C C T C T C T T
rs216928988
MGI SNP Detail
Alliance Variant
Chr3:151808563 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1873 bp proximal
SNP A/G G G G A A A A A G A A A A A A A A A A G G A G G A A A G G A G G A A A A A A A A A A A A A A A G G G A G G
rs51425709
MGI SNP Detail
Alliance Variant
Chr3:151808575 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1861 bp proximal
SNP C/T C C T T
rs255924563
MGI SNP Detail
Alliance Variant
Chr3:151808579 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1857 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs47426395
MGI SNP Detail
Alliance Variant
Chr3:151808586 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1850 bp proximal
SNP A/G G G A A
rs581709869
MGI SNP Detail
Alliance Variant
Chr3:151808739 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1697 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
rs231199803
MGI SNP Detail
Alliance Variant
Chr3:151808748 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1688 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C
rs47386321
MGI SNP Detail
Alliance Variant
Chr3:151808758 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1678 bp proximal
SNP A/G G A A
rs587243436
MGI SNP Detail
Alliance Variant
Chr3:151808767 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1669 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs45749241
MGI SNP Detail
Alliance Variant
Chr3:151808800 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1636 bp proximal
SNP C/G G C G G
rs223678492
MGI SNP Detail
Alliance Variant
Chr3:151808830 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1606 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs242416849
MGI SNP Detail
Alliance Variant
Chr3:151808855 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1581 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs52271805
MGI SNP Detail
Alliance Variant
Chr3:151808899 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1537 bp proximal
SNP C/T C T C C
rs581018420
MGI SNP Detail
Alliance Variant
Chr3:151808969 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1467 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs584709572
MGI SNP Detail
Alliance Variant
Chr3:151808989 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1447 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G G G G G G G G G G G G G
rs580783165
MGI SNP Detail
Alliance Variant
Chr3:151809046 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1390 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A A A A A A A A
rs579245939
MGI SNP Detail
Alliance Variant
Chr3:151809080 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1356 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs52148338
MGI SNP Detail
Alliance Variant
Chr3:151809090 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1346 bp proximal
SNP C/T C T C C
rs244196871
MGI SNP Detail
Alliance Variant
Chr3:151809109 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1327 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs249802771
MGI SNP Detail
Alliance Variant
Chr3:151809180 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1256 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs51916087
MGI SNP Detail
Alliance Variant
Chr3:151809181 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1255 bp proximal
SNP C/T C T C C
rs236707971
MGI SNP Detail
Alliance Variant
Chr3:151809187 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1249 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253880607
MGI SNP Detail
Alliance Variant
Chr3:151809205 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1231 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs233716139
MGI SNP Detail
Alliance Variant
Chr3:151809311 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1125 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250004404
MGI SNP Detail
Alliance Variant
Chr3:151809326 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1110 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T T
rs219664329
MGI SNP Detail
Alliance Variant
Chr3:151809347 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1089 bp proximal
SNP C C C
rs239808702
MGI SNP Detail
Alliance Variant
Chr3:151809398 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 1038 bp proximal
SNP T T T
rs52519350
MGI SNP Detail
Alliance Variant
Chr3:151809448 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 988 bp proximal
SNP A A A
rs225147962
MGI SNP Detail
Alliance Variant
Chr3:151809640 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 796 bp proximal
SNP C C C
rs224679015
MGI SNP Detail
Alliance Variant
Chr3:151809650 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 786 bp proximal
SNP C/T C C C T C C T T C C T T C C C C C C C C C C C C C C T C C C C C T C T C C C T C C C C T T C C T C C C C
rs243834059
MGI SNP Detail
Alliance Variant
Chr3:151809676 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 760 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs217796650
MGI SNP Detail
Alliance Variant
Chr3:151809697 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Rr587452 739 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239735836
MGI SNP Detail
Alliance Variant
Chr3:151809724 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 712 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263530759
MGI SNP Detail
Alliance Variant
Chr3:151809784 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 652 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs215909037
MGI SNP Detail
Alliance Variant
Chr3:151809807 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 629 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239246102
MGI SNP Detail
Alliance Variant
Chr3:151809853 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 583 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs30408697
MGI SNP Detail
Alliance Variant
Chr3:151809887 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 549 bp proximal
SNP G/T G T G G
rs30905277
MGI SNP Detail
Alliance Variant
Chr3:151809944 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 492 bp proximal
SNP A/T A T T A A
rs235971310
MGI SNP Detail
Alliance Variant
Chr3:151810029 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 407 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs248120574
MGI SNP Detail
Alliance Variant
Chr3:151810066 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 370 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs227172786
MGI SNP Detail
Alliance Variant
Chr3:151810096 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 340 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs247266025
MGI SNP Detail
Alliance Variant
Chr3:151810131 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 305 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs265694619
MGI SNP Detail
Alliance Variant
Chr3:151810163 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 273 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G
rs231443869
MGI SNP Detail
Alliance Variant
Chr3:151810165 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 271 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs239444948
MGI SNP Detail
Alliance Variant
Chr3:151810209 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 227 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257328093
MGI SNP Detail
Alliance Variant
Chr3:151810223 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 213 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C C C C C C C C C A C C C C
rs224635389
MGI SNP Detail
Alliance Variant
Chr3:151810237 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 199 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
rs30107242
MGI SNP Detail
Alliance Variant
Chr3:151810300 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 136 bp proximal
SNP A/T A T T A A
rs31006295
MGI SNP Detail
Alliance Variant
Chr3:151810377 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 59 bp proximal
SNP C/T C T T
rs582795847
MGI SNP Detail
Alliance Variant
Chr3:151810396 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 40 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs219732617
MGI SNP Detail
Alliance Variant
Chr3:151810449 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs234509873
MGI SNP Detail
Alliance Variant
Chr3:151810455 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30228243
MGI SNP Detail
Alliance Variant
Chr3:151810534 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP C/G G C C G G
rs216564075
MGI SNP Detail
Alliance Variant
Chr3:151810714 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G
rs237286964
MGI SNP Detail
Alliance Variant
Chr3:151810738 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254615619
MGI SNP Detail
Alliance Variant
Chr3:151810846 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP C C C
rs213086567
MGI SNP Detail
Alliance Variant
Chr3:151811007 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230048377
MGI SNP Detail
Alliance Variant
Chr3:151811028 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253281111
MGI SNP Detail
Alliance Variant
Chr3:151811076 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP A/G G G G A A A A A G A A A A A A A A A A G G A G G A A A G G A G G A A A A A A A A A A A A A A A G G G A G G
rs224896980
MGI SNP Detail
Alliance Variant
Chr3:151811085 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP A/C A C
rs244272670
MGI SNP Detail
Alliance Variant
Chr3:151811116 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP C/T C T
rs259452407
MGI SNP Detail
Alliance Variant
Chr3:151811127 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP A/C/G G G G C C C C C G C C C C C C C C C C A G C A G C C C G C G G C C C C C C C C C C C C C C C G A G C G G
rs223985219
MGI SNP Detail
Alliance Variant
Chr3:151811129 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs215836602
MGI SNP Detail
Alliance Variant
Chr3:151811133 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP C/T T C
rs257288970
MGI SNP Detail
Alliance Variant
Chr3:151811134 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579060548
MGI SNP Detail
Alliance Variant
Chr3:151811136 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs218691795
MGI SNP Detail
Alliance Variant
Chr3:151811142 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236843570
MGI SNP Detail
Alliance Variant
Chr3:151811160 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP A/G A A A G G G G G A G G G G G G G G G G G A G G A G G G A G A A G G G G G G G G G G G G G G G A G A G A A
rs266063285
MGI SNP Detail
Alliance Variant
Chr3:151811162 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP C/T C C C T T T T T C T T T T T T T T T T C C T C C T T T C T C C T T T T T T T T T T T T T T T C C C T C C
rs233458006
MGI SNP Detail
Alliance Variant
Chr3:151811164 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
Rr587453 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258679748
MGI SNP Detail
Alliance Variant
Chr3:151811167 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
Rr587453 within coordinates of
SNP A/G A A A G G G G G A G G G G G G G G G G G A G G A G G G A G A A G G G G G G G G G G G G G G G A G A G A A
rs263359901
MGI SNP Detail
Alliance Variant
Chr3:151811169 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
Rr587453 within coordinates of
SNP A/G G G G A A A A A G A A A A A A A A A A G G A G A A A G A G G A A A A A A A A A A A A A A A G G G A G G
rs226327286
MGI SNP Detail
Alliance Variant
Chr3:151811178 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
Rr587453 within coordinates of
SNP C/T C C C T T T T T C T T T T T T T T T T C C T C C T T T C T C C T T T T T T T T T T T T T T T C C T C C
rs232206610
MGI SNP Detail
Alliance Variant
Chr3:151811202 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP G G G
rs259498348
MGI SNP Detail
Alliance Variant
Chr3:151811216 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 within coordinates of
SNP A/C A C
rs230194631
MGI SNP Detail
Alliance Variant
Chr3:151811239 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 10 bp distal
Rr587454 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs582172815
MGI SNP Detail
Alliance Variant
Chr3:151811255 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 26 bp distal
Rr587454 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs47633537
MGI SNP Detail
Alliance Variant
Chr3:151811266 Cpgi13939 within coordinates of
Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 37 bp distal
Rr587454 within coordinates of
SNP C C C
rs219654336
MGI SNP Detail
Alliance Variant
Chr3:151811391 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 162 bp distal
Rr587454 within coordinates of
SNP C/T C T
rs230205350
MGI SNP Detail
Alliance Variant
Chr3:151811400 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 171 bp distal
Rr587454 within coordinates of
SNP G G G
rs238754745
MGI SNP Detail
Alliance Variant
Chr3:151811424 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 195 bp distal
Rr587454 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C
rs250797471
MGI SNP Detail
Alliance Variant
Chr3:151811467 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 238 bp distal
Rr587454 within coordinates of
SNP T T T
rs224200123
MGI SNP Detail
Alliance Variant
Chr3:151811504 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 275 bp distal
Rr587454 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232618827
MGI SNP Detail
Alliance Variant
Chr3:151811505 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 276 bp distal
Rr587454 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs214017609
MGI SNP Detail
Alliance Variant
Chr3:151811519 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 290 bp distal
Rr587454 within coordinates of
SNP A A A
rs218657933
MGI SNP Detail
Alliance Variant
Chr3:151811539 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 310 bp distal
Rr587454 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48980236
MGI SNP Detail
Alliance Variant
Chr3:151811556 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 327 bp distal
Rr587454 within coordinates of
SNP C/T T C C
rs49017571
MGI SNP Detail
Alliance Variant
Chr3:151811557 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 328 bp distal
Rr587454 within coordinates of
SNP A/T T A A
rs225717526
MGI SNP Detail
Alliance Variant
Chr3:151811575 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 346 bp distal
Rr587454 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs46841808
MGI SNP Detail
Alliance Variant
Chr3:151811619 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 390 bp distal
Rr587454 within coordinates of
SNP C/T T T C C
rs265599047
MGI SNP Detail
Alliance Variant
Chr3:151811620 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 391 bp distal
Rr587454 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
rs50809752
MGI SNP Detail
Alliance Variant
Chr3:151811653 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 424 bp distal
Rr587454 within coordinates of
SNP A/G A A G G
rs46955566
MGI SNP Detail
Alliance Variant
Chr3:151811661 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 432 bp distal
Rr587454 within coordinates of
SNP A/G A A G G
rs254911385
MGI SNP Detail
Alliance Variant
Chr3:151811667 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 438 bp distal
Rr587454 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs223738521
MGI SNP Detail
Alliance Variant
Chr3:151811737 Gipc2 Intron
Gipc2 Noncoding-Transcript-Variant
Gm31881 within coordinates of
Gm40179 within coordinates of
Rr587452 508 bp distal
Rr587454 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
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Showing SNP(s) 1 - 100 of 150

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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