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Mouse SNP Summary
Symbol
Name
ID 		Rr587673
regulatory region 587673
MGI:8049805

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214405556
MGI SNP Detail
Alliance Variant		 Chr3:153015728 A530083M17Rik within coordinates of
Rr587673 2000 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231387854
MGI SNP Detail
Alliance Variant		 Chr3:153015805 A530083M17Rik within coordinates of
Rr587673 1923 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs212917280
MGI SNP Detail
Alliance Variant		 Chr3:153015921 A530083M17Rik within coordinates of
Rr587673 1807 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs234872054
MGI SNP Detail
Alliance Variant		 Chr3:153016179 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1549 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G A
rs264297348
MGI SNP Detail
Alliance Variant		 Chr3:153016248 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1480 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs225934086
MGI SNP Detail
Alliance Variant		 Chr3:153016321 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1407 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs241475732
MGI SNP Detail
Alliance Variant		 Chr3:153016402 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1326 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs253130644
MGI SNP Detail
Alliance Variant		 Chr3:153016407 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1321 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs220669034
MGI SNP Detail
Alliance Variant		 Chr3:153016419 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1309 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs239243642
MGI SNP Detail
Alliance Variant		 Chr3:153016443 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1285 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs256471271
MGI SNP Detail
Alliance Variant		 Chr3:153016468 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1260 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219664635
MGI SNP Detail
Alliance Variant		 Chr3:153016497 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1231 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs49227655
MGI SNP Detail
Alliance Variant		 Chr3:153016572 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1156 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C T T C C
rs50770324
MGI SNP Detail
Alliance Variant		 Chr3:153016573 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1155 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A G G A A
rs232155834
MGI SNP Detail
Alliance Variant		 Chr3:153016582 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1146 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245189839
MGI SNP Detail
Alliance Variant		 Chr3:153016584 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1144 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs584910630
MGI SNP Detail
Alliance Variant		 Chr3:153016617 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1111 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs51924836
MGI SNP Detail
Alliance Variant		 Chr3:153016621 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1107 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G A A G G
rs240805732
MGI SNP Detail
Alliance Variant		 Chr3:153016634 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1094 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C C C
rs243022612
MGI SNP Detail
Alliance Variant		 Chr3:153016658 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1070 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs212917752
MGI SNP Detail
Alliance Variant		 Chr3:153016673 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1055 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236395154
MGI SNP Detail
Alliance Variant		 Chr3:153016687 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1041 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs254758016
MGI SNP Detail
Alliance Variant		 Chr3:153016696 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1032 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs218375722
MGI SNP Detail
Alliance Variant		 Chr3:153016698 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1030 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238836454
MGI SNP Detail
Alliance Variant		 Chr3:153016718 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1010 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253142137
MGI SNP Detail
Alliance Variant		 Chr3:153016727 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 1001 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220500946
MGI SNP Detail
Alliance Variant		 Chr3:153016746 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 982 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs30645338
MGI SNP Detail
Alliance Variant		 Chr3:153016750 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 978 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T C T T T T T T T T
rs250795938
MGI SNP Detail
Alliance Variant		 Chr3:153016757 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 971 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs220893507
MGI SNP Detail
Alliance Variant		 Chr3:153016760 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 968 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250800883
MGI SNP Detail
Alliance Variant		 Chr3:153016779 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 949 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263868685
MGI SNP Detail
Alliance Variant		 Chr3:153016784 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 944 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224917163
MGI SNP Detail
Alliance Variant		 Chr3:153016806 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 922 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs238931339
MGI SNP Detail
Alliance Variant		 Chr3:153016880 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 848 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs256192932
MGI SNP Detail
Alliance Variant		 Chr3:153016899 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 829 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs225112357
MGI SNP Detail
Alliance Variant		 Chr3:153016931 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 797 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs242941696
MGI SNP Detail
Alliance Variant		 Chr3:153016992 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 736 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs264652003
MGI SNP Detail
Alliance Variant		 Chr3:153016998 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 730 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233843791
MGI SNP Detail
Alliance Variant		 Chr3:153017032 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 696 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30645335
MGI SNP Detail
Alliance Variant		 Chr3:153017042 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 686 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C T C T T T T C C T T T T C T
rs218071738
MGI SNP Detail
Alliance Variant		 Chr3:153017044 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 684 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs50735820
MGI SNP Detail
Alliance Variant		 Chr3:153017052 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 676 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C T T C C
rs246643453
MGI SNP Detail
Alliance Variant		 Chr3:153017053 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 675 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30644342
MGI SNP Detail
Alliance Variant		 Chr3:153017075 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 653 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T C T C T C T C C T T C C C C T C
rs48044589
MGI SNP Detail
Alliance Variant		 Chr3:153017118 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 610 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A G G A A
rs49049876
MGI SNP Detail
Alliance Variant		 Chr3:153017128 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 600 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T C C T T
rs50736786
MGI SNP Detail
Alliance Variant		 Chr3:153017132 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 596 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C T T C C
rs30644339
MGI SNP Detail
Alliance Variant		 Chr3:153017189 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 539 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C T C T T T T T C C T T T T C T
rs263630318
MGI SNP Detail
Alliance Variant		 Chr3:153017229 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 499 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224631663
MGI SNP Detail
Alliance Variant		 Chr3:153017239 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 489 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs46498896
MGI SNP Detail
Alliance Variant		 Chr3:153017261 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 467 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G A A G G
rs250295696
MGI SNP Detail
Alliance Variant		 Chr3:153017266 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 462 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs219159488
MGI SNP Detail
Alliance Variant		 Chr3:153017292 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 436 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236612800
MGI SNP Detail
Alliance Variant		 Chr3:153017333 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 395 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261396314
MGI SNP Detail
Alliance Variant		 Chr3:153017340 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 388 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs234971235
MGI SNP Detail
Alliance Variant		 Chr3:153017350 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 378 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs46719355
MGI SNP Detail
Alliance Variant		 Chr3:153017390 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 338 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G A A G G
rs46574014
MGI SNP Detail
Alliance Variant		 Chr3:153017407 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 321 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C T T C C
rs228117358
MGI SNP Detail
Alliance Variant		 Chr3:153017427 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 301 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs246546576
MGI SNP Detail
Alliance Variant		 Chr3:153017431 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 297 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs214594208
MGI SNP Detail
Alliance Variant		 Chr3:153017444 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 284 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs30644336
MGI SNP Detail
Alliance Variant		 Chr3:153017467 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 261 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C T C T T T T T T C C T T T C C T
rs254601536
MGI SNP Detail
Alliance Variant		 Chr3:153017473 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 255 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30643373
MGI SNP Detail
Alliance Variant		 Chr3:153017489 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 239 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C T C T T T T T T C C T T T C
rs243524776
MGI SNP Detail
Alliance Variant		 Chr3:153017522 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 206 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs260530770
MGI SNP Detail
Alliance Variant		 Chr3:153017523 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 205 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs216257928
MGI SNP Detail
Alliance Variant		 Chr3:153017542 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 186 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs232586547
MGI SNP Detail
Alliance Variant		 Chr3:153017547 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 181 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs250168822
MGI SNP Detail
Alliance Variant		 Chr3:153017561 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 167 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs219216782
MGI SNP Detail
Alliance Variant		 Chr3:153017593 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 135 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs30643370
MGI SNP Detail
Alliance Variant		 Chr3:153017658 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 70 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T C T C C C T C C T T C C C C T C
rs260791748
MGI SNP Detail
Alliance Variant		 Chr3:153017710 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 18 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A A A A A A A A T A A A A A A A T A A A A
rs226532526
MGI SNP Detail
Alliance Variant		 Chr3:153017712 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 16 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30643367
MGI SNP Detail
Alliance Variant		 Chr3:153017731 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G A G A G A G A A G G A A A A G A
rs263578339
MGI SNP Detail
Alliance Variant		 Chr3:153017757 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs227301225
MGI SNP Detail
Alliance Variant		 Chr3:153017758 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240639928
MGI SNP Detail
Alliance Variant		 Chr3:153017765 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258398584
MGI SNP Detail
Alliance Variant		 Chr3:153017766 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225957075
MGI SNP Detail
Alliance Variant		 Chr3:153017771 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs250040867
MGI SNP Detail
Alliance Variant		 Chr3:153017784 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212608755
MGI SNP Detail
Alliance Variant		 Chr3:153017788 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs579089142
MGI SNP Detail
Alliance Variant		 Chr3:153017801 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs234164456
MGI SNP Detail
Alliance Variant		 Chr3:153017803 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs582250801
MGI SNP Detail
Alliance Variant		 Chr3:153017807 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs584440193
MGI SNP Detail
Alliance Variant		 Chr3:153017809 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs259463370
MGI SNP Detail
Alliance Variant		 Chr3:153017818 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs250983559
MGI SNP Detail
Alliance Variant		 Chr3:153017826 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP G G G
rs244280327
MGI SNP Detail
Alliance Variant		 Chr3:153017832 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs213311762
MGI SNP Detail
Alliance Variant		 Chr3:153017834 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs581647673
MGI SNP Detail
Alliance Variant		 Chr3:153017859 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs237008681
MGI SNP Detail
Alliance Variant		 Chr3:153017884 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs255243724
MGI SNP Detail
Alliance Variant		 Chr3:153017888 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G T G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs585503336
MGI SNP Detail
Alliance Variant		 Chr3:153017901 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579158713
MGI SNP Detail
Alliance Variant		 Chr3:153017903 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs582967618
MGI SNP Detail
Alliance Variant		 Chr3:153017905 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs585882354
MGI SNP Detail
Alliance Variant		 Chr3:153017922 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T T G T T T T T T T G T T T T
rs580362348
MGI SNP Detail
Alliance Variant		 Chr3:153017930 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583405218
MGI SNP Detail
Alliance Variant		 Chr3:153017941 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30596218
MGI SNP Detail
Alliance Variant		 Chr3:153018024 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 50 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T C C T T
rs31491168
MGI SNP Detail
Alliance Variant		 Chr3:153018026 A530083M17Rik within coordinates of
Rr375926 within coordinates of
Rr587673 52 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A G G A A
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Showing SNP(s) 1 - 100 of 167
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory