About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Rr587708
regulatory region 587708
MGI:8049840

<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 168

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs46326598
MGI SNP Detail
Alliance Variant		 Chr3:153298392 Gm32721 within coordinates of
Rr587708 1998 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C T T
rs247796272
MGI SNP Detail
Alliance Variant		 Chr3:153298394 Gm32721 within coordinates of
Rr587708 1996 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215572504
MGI SNP Detail
Alliance Variant		 Chr3:153298416 Gm32721 within coordinates of
Rr587708 1974 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs239567429
MGI SNP Detail
Alliance Variant		 Chr3:153298424 Gm32721 within coordinates of
Rr587708 1966 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs251231063
MGI SNP Detail
Alliance Variant		 Chr3:153298426 Gm32721 within coordinates of
Rr587708 1964 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs214153584
MGI SNP Detail
Alliance Variant		 Chr3:153298437 Gm32721 within coordinates of
Rr587708 1953 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs235455529
MGI SNP Detail
Alliance Variant		 Chr3:153298458 Gm32721 within coordinates of
Rr587708 1932 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C C C C C C C C C C C C C C G C C C C C C C G C C C C
rs260762499
MGI SNP Detail
Alliance Variant		 Chr3:153298472 Gm32721 within coordinates of
Rr587708 1918 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs580594209
MGI SNP Detail
Alliance Variant		 Chr3:153298481 Gm32721 within coordinates of
Rr587708 1909 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs582548750
MGI SNP Detail
Alliance Variant		 Chr3:153298483 Gm32721 within coordinates of
Rr587708 1907 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs222570021
MGI SNP Detail
Alliance Variant		 Chr3:153298542 Gm32721 within coordinates of
Rr587708 1848 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs50680963
MGI SNP Detail
Alliance Variant		 Chr3:153298559 Gm32721 within coordinates of
Rr587708 1831 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T C C
rs252752353
MGI SNP Detail
Alliance Variant		 Chr3:153298560 Gm32721 within coordinates of
Rr587708 1830 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs221585090
MGI SNP Detail
Alliance Variant		 Chr3:153298572 Gm32721 within coordinates of
Rr587708 1818 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51387134
MGI SNP Detail
Alliance Variant		 Chr3:153298574 Gm32721 within coordinates of
Rr587708 1816 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP G/T T G G
rs262828513
MGI SNP Detail
Alliance Variant		 Chr3:153298575 Gm32721 within coordinates of
Rr587708 1815 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs222595479
MGI SNP Detail
Alliance Variant		 Chr3:153298576 Gm32721 within coordinates of
Rr587708 1814 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs51757595
MGI SNP Detail
Alliance Variant		 Chr3:153298589 Gm32721 within coordinates of
Rr587708 1801 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T C C
rs256246726
MGI SNP Detail
Alliance Variant		 Chr3:153298598 Gm32721 within coordinates of
Rr587708 1792 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A A A G G G G G A G G G G G G G G G G G G G G G G G G A G G G A G G G G G G G G G G G G G G G G A G G G G
rs229476749
MGI SNP Detail
Alliance Variant		 Chr3:153298600 Gm32721 within coordinates of
Rr587708 1790 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A A A G G G G G A G G G G G G G G G G G G G G G G G G A G G G A G G G G G G G G G G G G G G G G A G G G G
rs248322691
MGI SNP Detail
Alliance Variant		 Chr3:153298601 Gm32721 within coordinates of
Rr587708 1789 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T C C C C C T C C C C C C C C C C C C C C C C C C T C C C T C C C C C C C C C C C C C C C C T C C C C
rs48096758
MGI SNP Detail
Alliance Variant		 Chr3:153298617 Gm32721 within coordinates of
Rr587708 1773 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G A A
rs49922756
MGI SNP Detail
Alliance Variant		 Chr3:153298622 Gm32721 within coordinates of
Rr587708 1768 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T C C
rs255840419
MGI SNP Detail
Alliance Variant		 Chr3:153298646 Gm32721 within coordinates of
Rr587708 1744 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C T C C C C C C C C C C T C C T C C C C C T C T T
rs213381102
MGI SNP Detail
Alliance Variant		 Chr3:153298662 Gm32721 within coordinates of
Rr587708 1728 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237197723
MGI SNP Detail
Alliance Variant		 Chr3:153298669 Gm32721 within coordinates of
Rr587708 1721 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs242293756
MGI SNP Detail
Alliance Variant		 Chr3:153298672 Gm32721 within coordinates of
Rr587708 1718 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G G G G G G G G G G A G G G G G A G G G
rs217198734
MGI SNP Detail
Alliance Variant		 Chr3:153298678 Gm32721 within coordinates of
Rr587708 1712 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G A G G G G G G G G G G A G G A G G G G G A G A A
rs234170251
MGI SNP Detail
Alliance Variant		 Chr3:153298679 Gm32721 within coordinates of
Rr587708 1711 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251878135
MGI SNP Detail
Alliance Variant		 Chr3:153298716 Gm32721 within coordinates of
Rr587708 1674 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs49510362
MGI SNP Detail
Alliance Variant		 Chr3:153298815 Gm32721 within coordinates of
Rr587708 1575 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C T
rs238079799
MGI SNP Detail
Alliance Variant		 Chr3:153298850 Gm32721 within coordinates of
Rr587708 1540 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T G T G T
rs262472590
MGI SNP Detail
Alliance Variant		 Chr3:153298852 Gm32721 within coordinates of
Rr587708 1538 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C A C A C
rs222656997
MGI SNP Detail
Alliance Variant		 Chr3:153298870 Gm32721 within coordinates of
Rr587708 1520 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G
rs245412651
MGI SNP Detail
Alliance Variant		 Chr3:153298884 Gm32721 within coordinates of
Rr587708 1506 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249999134
MGI SNP Detail
Alliance Variant		 Chr3:153298895 Gm32721 within coordinates of
Rr587708 1495 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223857728
MGI SNP Detail
Alliance Variant		 Chr3:153298927 Gm32721 within coordinates of
Rr587708 1463 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242250327
MGI SNP Detail
Alliance Variant		 Chr3:153298930 Gm32721 within coordinates of
Rr587708 1460 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260219917
MGI SNP Detail
Alliance Variant		 Chr3:153298943 Gm32721 within coordinates of
Rr587708 1447 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30629865
MGI SNP Detail
Alliance Variant		 Chr3:153298966 Gm32721 within coordinates of
Rr587708 1424 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T C T T T T T T T T
rs48798531
MGI SNP Detail
Alliance Variant		 Chr3:153299028 Gm32721 within coordinates of
Rr587708 1362 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/G G C
rs264974260
MGI SNP Detail
Alliance Variant		 Chr3:153299040 Gm32721 within coordinates of
Rr587708 1350 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46028345
MGI SNP Detail
Alliance Variant		 Chr3:153299059 Gm32721 within coordinates of
Rr587708 1331 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP G/T T G
rs30629012
MGI SNP Detail
Alliance Variant		 Chr3:153299226 Gm32721 within coordinates of
Rr587708 1164 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP G/T T T T T T T T T T T T T T T G
rs217292913
MGI SNP Detail
Alliance Variant		 Chr3:153299253 Gm32721 within coordinates of
Rr587708 1137 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30629009
MGI SNP Detail
Alliance Variant		 Chr3:153299369 Gm32721 within coordinates of
Rr587708 1021 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A G G G A G G G G G G G G G G
rs245845840
MGI SNP Detail
Alliance Variant		 Chr3:153299389 Gm32721 within coordinates of
Rr587708 1001 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP G/T G G G T T T T T G T T T T T T T T T T G T T G T T T T G T G T G T T T T T T T T G T T G T T T T G G T G T
rs215571951
MGI SNP Detail
Alliance Variant		 Chr3:153299421 Gm32721 within coordinates of
Rr587708 969 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240133290
MGI SNP Detail
Alliance Variant		 Chr3:153299426 Gm32721 within coordinates of
Rr587708 964 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C C C C C C C C T C C C C T T C C C
rs30629006
MGI SNP Detail
Alliance Variant		 Chr3:153299440 Gm32721 within coordinates of
Rr587708 950 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A G G G A G G G G G G G G A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214463688
MGI SNP Detail
Alliance Variant		 Chr3:153299473 Gm32721 within coordinates of
Rr587708 917 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T C T
rs586017668
MGI SNP Detail
Alliance Variant		 Chr3:153299478 Gm32721 within coordinates of
Rr587708 912 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230700925
MGI SNP Detail
Alliance Variant		 Chr3:153299521 Gm32721 within coordinates of
Rr587708 869 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A
rs249721134
MGI SNP Detail
Alliance Variant		 Chr3:153299589 Gm32721 within coordinates of
Rr587708 801 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T
rs223781694
MGI SNP Detail
Alliance Variant		 Chr3:153299604 Gm32721 within coordinates of
Rr587708 786 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G A A A A A G A A A A A A A A A A G A A G A A A A G A A A G A A A A A A A A G A A A A A A A G A A A A
rs45851352
MGI SNP Detail
Alliance Variant		 Chr3:153299625 Gm32721 within coordinates of
Rr587708 765 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T C C
rs30628223
MGI SNP Detail
Alliance Variant		 Chr3:153299641 Gm32721 within coordinates of
Rr587708 749 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP G/T T T G G G T G G G G G G G G T T
rs224473080
MGI SNP Detail
Alliance Variant		 Chr3:153299675 Gm32721 within coordinates of
Rr587708 715 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246546014
MGI SNP Detail
Alliance Variant		 Chr3:153299745 Gm32721 within coordinates of
Rr587708 645 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs580206712
MGI SNP Detail
Alliance Variant		 Chr3:153299796 Gm32721 within coordinates of
Rr587708 594 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262252652
MGI SNP Detail
Alliance Variant		 Chr3:153299822 Gm32721 within coordinates of
Rr587708 568 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G A
rs229013175
MGI SNP Detail
Alliance Variant		 Chr3:153299846 Gm32721 within coordinates of
Rr587708 544 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G
rs30628220
MGI SNP Detail
Alliance Variant		 Chr3:153299864 Gm32721 within coordinates of
Rr587708 526 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G/T T A A A A A G A A A A A A G G
rs30628217
MGI SNP Detail
Alliance Variant		 Chr3:153299913 Gm32721 within coordinates of
Rr587708 477 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G A G G G G G G G A
rs30628214
MGI SNP Detail
Alliance Variant		 Chr3:153299916 Gm32721 within coordinates of
Rr587708 474 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/C A A C C C A C C C C C C C A
rs245968817
MGI SNP Detail
Alliance Variant		 Chr3:153299926 Gm32721 within coordinates of
Rr587708 464 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs215962074
MGI SNP Detail
Alliance Variant		 Chr3:153299960 Gm32721 within coordinates of
Rr587708 430 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs48166142
MGI SNP Detail
Alliance Variant		 Chr3:153299980 Gm32721 within coordinates of
Rr587708 410 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP G/T T G
rs51188171
MGI SNP Detail
Alliance Variant		 Chr3:153299983 Gm32721 within coordinates of
Rr587708 407 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A G G
rs213992899
MGI SNP Detail
Alliance Variant		 Chr3:153300019 Gm32721 within coordinates of
Rr587708 371 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs230901680
MGI SNP Detail
Alliance Variant		 Chr3:153300031 Gm32721 within coordinates of
Rr587708 359 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586604277
MGI SNP Detail
Alliance Variant		 Chr3:153300081 Gm32721 within coordinates of
Rr587708 309 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs30627411
MGI SNP Detail
Alliance Variant		 Chr3:153300085 Gm32721 within coordinates of
Rr587708 305 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G A A A G A A A A A A A A G A
rs30627408
MGI SNP Detail
Alliance Variant		 Chr3:153300099 Gm32721 within coordinates of
Rr587708 291 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G A A A G A A A A A A A A G G
rs217500834
MGI SNP Detail
Alliance Variant		 Chr3:153300135 Gm32721 within coordinates of
Rr587708 255 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47549703
MGI SNP Detail
Alliance Variant		 Chr3:153300179 Gm32721 within coordinates of
Rr587708 211 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C T T
rs579355897
MGI SNP Detail
Alliance Variant		 Chr3:153300196 Gm32721 within coordinates of
Rr587708 194 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262173492
MGI SNP Detail
Alliance Variant		 Chr3:153300228 Gm32721 within coordinates of
Rr587708 162 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs221754686
MGI SNP Detail
Alliance Variant		 Chr3:153300246 Gm32721 within coordinates of
Rr587708 144 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs239747915
MGI SNP Detail
Alliance Variant		 Chr3:153300265 Gm32721 within coordinates of
Rr587708 125 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51829615
MGI SNP Detail
Alliance Variant		 Chr3:153300270 Gm32721 within coordinates of
Rr587708 120 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A G
rs45921246
MGI SNP Detail
Alliance Variant		 Chr3:153300288 Gm32721 within coordinates of
Rr587708 102 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A G
rs250563440
MGI SNP Detail
Alliance Variant		 Chr3:153300317 Gm32721 within coordinates of
Rr587708 73 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs264835021
MGI SNP Detail
Alliance Variant		 Chr3:153300346 Gm32721 within coordinates of
Rr587708 44 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs225108130
MGI SNP Detail
Alliance Variant		 Chr3:153300347 Gm32721 within coordinates of
Rr587708 43 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48415259
MGI SNP Detail
Alliance Variant		 Chr3:153300355 Gm32721 within coordinates of
Rr587708 35 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T C
rs45930954
MGI SNP Detail
Alliance Variant		 Chr3:153300358 Gm32721 within coordinates of
Rr587708 32 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C C
rs217445739
MGI SNP Detail
Alliance Variant		 Chr3:153300405 Gm32721 within coordinates of
Rr587708 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235595958
MGI SNP Detail
Alliance Variant		 Chr3:153300468 Gm32721 within coordinates of
Rr587708 57 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258397698
MGI SNP Detail
Alliance Variant		 Chr3:153300477 Gm32721 within coordinates of
Rr587708 66 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216150398
MGI SNP Detail
Alliance Variant		 Chr3:153300484 Gm32721 within coordinates of
Rr587708 73 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A A A G G G G G A G G G G G G G G G G A G G A G G G G A G G G A G G G G G G G G A G G G G G G G A G G G G
rs583005875
MGI SNP Detail
Alliance Variant		 Chr3:153300494 Gm32721 within coordinates of
Rr587708 83 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587438555
MGI SNP Detail
Alliance Variant		 Chr3:153300495 Gm32721 within coordinates of
Rr587708 84 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs239474177
MGI SNP Detail
Alliance Variant		 Chr3:153300496 Gm32721 within coordinates of
Rr587708 85 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A A G G G G G A G G G G G G G G G G A G G A G G G G A G G G A G G G G G G G G A G G G G G G G A G G A A
rs257319685
MGI SNP Detail
Alliance Variant		 Chr3:153300499 Gm32721 within coordinates of
Rr587708 88 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/C/T T T C C C C C T C C C C C C C C C C T C C T C C C C T C C C T C C C C C C C C T C C C C C C C A C C C C
rs218921483
MGI SNP Detail
Alliance Variant		 Chr3:153300500 Gm32721 within coordinates of
Rr587708 89 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T C C C C C T C C C C C C C C C C T C C T C C C C T C C C T C C C C C C C C T C C C C C C C C C C C C
rs584078688
MGI SNP Detail
Alliance Variant		 Chr3:153300503 Gm32721 within coordinates of
Rr587708 92 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T C C C C C T C C C C C C C C C C C C C T C C C C T C C C T C C C C C C C C T C C C C C C C T C C C C
rs229703037
MGI SNP Detail
Alliance Variant		 Chr3:153300506 Gm32721 within coordinates of
Rr587708 95 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C C
rs253010242
MGI SNP Detail
Alliance Variant		 Chr3:153300515 Gm32721 within coordinates of
Rr587708 104 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP A/G A A A G G G G G A G G G G G G G G G G A G G A G G G G A G G G A G G G G G G G G A G G G G G G G A G G A A
rs221839819
MGI SNP Detail
Alliance Variant		 Chr3:153300524 Gm32721 within coordinates of
Rr587708 113 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
 SNP C/T C C C T T T T T C T T T T T T T T T T C T T C T T T T C T T T C T T T T T T T T C T T T T T T T C T T T T
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 168
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory