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Mouse SNP Summary
Symbol
Name
ID
Rr587721
regulatory region 587721
MGI:8049853

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215276858
MGI SNP Detail
Alliance Variant
Chr3:153363322 Rr587721 1986 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs49854295
MGI SNP Detail
Alliance Variant
Chr3:153363333 Rr587721 1975 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G A
rs261768964
MGI SNP Detail
Alliance Variant
Chr3:153363364 Rr587721 1944 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs230757135
MGI SNP Detail
Alliance Variant
Chr3:153363442 Rr587721 1866 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C T
rs30621444
MGI SNP Detail
Alliance Variant
Chr3:153363533 Rr587721 1775 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C T T T C T T T T T T T T T T
rs252848769
MGI SNP Detail
Alliance Variant
Chr3:153363540 Rr587721 1768 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs221248917
MGI SNP Detail
Alliance Variant
Chr3:153363572 Rr587721 1736 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs30620601
MGI SNP Detail
Alliance Variant
Chr3:153363647 Rr587721 1661 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C T T T C T T T T T T T T T
rs47149781
MGI SNP Detail
Alliance Variant
Chr3:153363669 Rr587721 1639 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G A
rs50023628
MGI SNP Detail
Alliance Variant
Chr3:153363680 Rr587721 1628 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A G
rs46659156
MGI SNP Detail
Alliance Variant
Chr3:153363712 Rr587721 1596 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A G
rs264646986
MGI SNP Detail
Alliance Variant
Chr3:153363731 Rr587721 1577 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs229237538
MGI SNP Detail
Alliance Variant
Chr3:153363764 Rr587721 1544 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30620598
MGI SNP Detail
Alliance Variant
Chr3:153363811 Rr587719 within coordinates of
Rr587721 1497 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/G C C G G G C G G G G G G G G G
rs30620595
MGI SNP Detail
Alliance Variant
Chr3:153363824 Rr587719 within coordinates of
Rr587721 1484 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T T C C C T C C C C C C C C C C
rs228182052
MGI SNP Detail
Alliance Variant
Chr3:153363861 Rr587719 within coordinates of
Rr587721 1447 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs257496372
MGI SNP Detail
Alliance Variant
Chr3:153363872 Rr587719 within coordinates of
Rr587721 1436 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs108661352
MGI SNP Detail
Alliance Variant
Chr3:153363893 Rr587719 within coordinates of
Rr587721 1415 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T C C
rs30619682
MGI SNP Detail
Alliance Variant
Chr3:153363910 Rr587719 within coordinates of
Rr587721 1398 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/G C G G G C G C G G G G G G G G
rs250008666
MGI SNP Detail
Alliance Variant
Chr3:153363925 Rr587719 within coordinates of
Rr587721 1383 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212457550
MGI SNP Detail
Alliance Variant
Chr3:153363928 Rr587719 within coordinates of
Rr587721 1380 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235533761
MGI SNP Detail
Alliance Variant
Chr3:153363934 Rr587719 within coordinates of
Rr587721 1374 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262328651
MGI SNP Detail
Alliance Variant
Chr3:153363973 Rr587719 within coordinates of
Rr587721 1335 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs222218278
MGI SNP Detail
Alliance Variant
Chr3:153363976 Rr587719 within coordinates of
Rr587721 1332 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/C/T C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30619679
MGI SNP Detail
Alliance Variant
Chr3:153364026 Rr587719 within coordinates of
Rr587721 1282 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T T C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255225777
MGI SNP Detail
Alliance Variant
Chr3:153364069 Rr587719 within coordinates of
Rr587721 1239 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs51782735
MGI SNP Detail
Alliance Variant
Chr3:153364182 Rr587719 within coordinates of
Rr587721 1126 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T C C
rs579021618
MGI SNP Detail
Alliance Variant
Chr3:153364183 Rr587719 within coordinates of
Rr587721 1125 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs49344942
MGI SNP Detail
Alliance Variant
Chr3:153364204 Rr587719 within coordinates of
Rr587721 1104 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/G C G G
rs259755976
MGI SNP Detail
Alliance Variant
Chr3:153364233 Rr587719 within coordinates of
Rr587721 1075 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs220931010
MGI SNP Detail
Alliance Variant
Chr3:153364308 Rr587719 within coordinates of
Rr587721 1000 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs49850793
MGI SNP Detail
Alliance Variant
Chr3:153364401 Rr587719 within coordinates of
Rr587721 907 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G A A
rs265331786
MGI SNP Detail
Alliance Variant
Chr3:153364410 Rr587719 within coordinates of
Rr587721 898 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs49453937
MGI SNP Detail
Alliance Variant
Chr3:153364424 Rr587719 within coordinates of
Rr587721 884 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G A A
rs254270332
MGI SNP Detail
Alliance Variant
Chr3:153364435 Rr587719 within coordinates of
Rr587721 873 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253993072
MGI SNP Detail
Alliance Variant
Chr3:153364437 Rr587719 within coordinates of
Rr587721 871 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229532014
MGI SNP Detail
Alliance Variant
Chr3:153364439 Rr587719 within coordinates of
Rr587721 869 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C
rs247064857
MGI SNP Detail
Alliance Variant
Chr3:153364481 Rr587719 within coordinates of
Rr587721 827 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T C T
rs216137371
MGI SNP Detail
Alliance Variant
Chr3:153364486 Rr587719 within coordinates of
Rr587721 822 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs240334479
MGI SNP Detail
Alliance Variant
Chr3:153364533 Rr587721 775 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs251816504
MGI SNP Detail
Alliance Variant
Chr3:153364544 Rr587721 764 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A
rs107830848
MGI SNP Detail
Alliance Variant
Chr3:153364560 Rr587721 748 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G A A
rs235297340
MGI SNP Detail
Alliance Variant
Chr3:153364615 Rr587721 693 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582116476
MGI SNP Detail
Alliance Variant
Chr3:153364644 Rr587721 664 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs249270663
MGI SNP Detail
Alliance Variant
Chr3:153364715 Rr587721 593 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs223180117
MGI SNP Detail
Alliance Variant
Chr3:153364731 Rr587721 577 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T
rs235488588
MGI SNP Detail
Alliance Variant
Chr3:153364752 Rr587721 556 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253586430
MGI SNP Detail
Alliance Variant
Chr3:153364817 Rr587721 491 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs30619676
MGI SNP Detail
Alliance Variant
Chr3:153364818 Rr587721 490 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T T T T T T C T T T T T T T C
rs30618683
MGI SNP Detail
Alliance Variant
Chr3:153364847 Rr587721 461 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/G G G C C C G C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222307918
MGI SNP Detail
Alliance Variant
Chr3:153364898 Rr587721 410 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30618680
MGI SNP Detail
Alliance Variant
Chr3:153364912 Rr587721 396 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C T T T C T T C T T T T T T T T
rs30618677
MGI SNP Detail
Alliance Variant
Chr3:153364957 Rr587721 351 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A G G G A G A G G G G G G G G
rs229299309
MGI SNP Detail
Alliance Variant
Chr3:153365031 Rr587721 277 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247007231
MGI SNP Detail
Alliance Variant
Chr3:153365055 Rr587721 253 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs258493814
MGI SNP Detail
Alliance Variant
Chr3:153365078 Rr587721 230 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs30990647
MGI SNP Detail
Alliance Variant
Chr3:153365120 Rr587721 188 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G A A A
rs30277553
MGI SNP Detail
Alliance Variant
Chr3:153365129 Rr587721 179 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A A G G G A G G G G G G G G G G
rs214188538
MGI SNP Detail
Alliance Variant
Chr3:153365147 Rr587721 161 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs236930152
MGI SNP Detail
Alliance Variant
Chr3:153365183 Rr587721 125 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs51049523
MGI SNP Detail
Alliance Variant
Chr3:153365196 Rr587721 112 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T T T C C C C C T C C C C C C C C C C T C C T C C C C T C C C T C C C C C C C C T C C C C C C C T C C C C
rs217057581
MGI SNP Detail
Alliance Variant
Chr3:153365201 Rr587721 107 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30262945
MGI SNP Detail
Alliance Variant
Chr3:153365203 Rr587721 105 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G A A A
rs30154768
MGI SNP Detail
Alliance Variant
Chr3:153365209 Rr587721 99 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A G G G
rs216118092
MGI SNP Detail
Alliance Variant
Chr3:153365212 Rr587721 96 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30856927
MGI SNP Detail
Alliance Variant
Chr3:153365214 Rr587721 94 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP G/T T G G G
rs261923076
MGI SNP Detail
Alliance Variant
Chr3:153365230 Rr587721 78 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs585504290
MGI SNP Detail
Alliance Variant
Chr3:153365271 Rr587721 37 bp proximal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30617862
MGI SNP Detail
Alliance Variant
Chr3:153365369 Rr587721 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G A A A G A G A A A A G A A A G
rs30852677
MGI SNP Detail
Alliance Variant
Chr3:153365383 Rr587721 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/C C A A
rs31038605
MGI SNP Detail
Alliance Variant
Chr3:153365421 Rr587721 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G A A
rs30407091
MGI SNP Detail
Alliance Variant
Chr3:153365502 Rr587721 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A A G G G A G A G G G G G G G G
rs46878007
MGI SNP Detail
Alliance Variant
Chr3:153365687 Rr587721 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G A A A A A G A A A A A A A A A A G A G G A A A A G A A A G A A A A A A A A G A A A A A A A A A G A
rs258214636
MGI SNP Detail
Alliance Variant
Chr3:153365739 Rr587721 within coordinates of
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs232563023
MGI SNP Detail
Alliance Variant
Chr3:153365778 Rr587721 2 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30617857
MGI SNP Detail
Alliance Variant
Chr3:153365794 Rr587721 18 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G A A A G A A A A A A A A A
rs30617854
MGI SNP Detail
Alliance Variant
Chr3:153365817 Rr587721 41 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G A A A A A A A A A A A A A
rs229162517
MGI SNP Detail
Alliance Variant
Chr3:153365841 Rr587721 65 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30631909
MGI SNP Detail
Alliance Variant
Chr3:153365862 Rr587721 86 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C T
rs50261352
MGI SNP Detail
Alliance Variant
Chr3:153365879 Rr587721 103 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C T T
rs50246977
MGI SNP Detail
Alliance Variant
Chr3:153365883 Rr587721 107 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A G G
rs246940515
MGI SNP Detail
Alliance Variant
Chr3:153365897 Rr587721 121 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs215315715
MGI SNP Detail
Alliance Variant
Chr3:153365901 Rr587721 125 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238958238
MGI SNP Detail
Alliance Variant
Chr3:153365920 Rr587721 144 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs257057510
MGI SNP Detail
Alliance Variant
Chr3:153365927 Rr587721 151 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs213042590
MGI SNP Detail
Alliance Variant
Chr3:153365934 Rr587721 158 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs579546989
MGI SNP Detail
Alliance Variant
Chr3:153366030 Rr587721 254 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs582115425
MGI SNP Detail
Alliance Variant
Chr3:153366041 Rr587721 265 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229854647
MGI SNP Detail
Alliance Variant
Chr3:153366043 Rr587721 267 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs52074963
MGI SNP Detail
Alliance Variant
Chr3:153366051 Rr587721 275 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/T A T T
rs52165800
MGI SNP Detail
Alliance Variant
Chr3:153366062 Rr587721 286 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T T C C
rs586369490
MGI SNP Detail
Alliance Variant
Chr3:153366065 Rr587721 289 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241031689
MGI SNP Detail
Alliance Variant
Chr3:153366075 Rr587721 299 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580389084
MGI SNP Detail
Alliance Variant
Chr3:153366181 Rr587721 405 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs584067021
MGI SNP Detail
Alliance Variant
Chr3:153366244 Rr587721 468 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs587129191
MGI SNP Detail
Alliance Variant
Chr3:153366332 Rr587721 556 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A
rs580151839
MGI SNP Detail
Alliance Variant
Chr3:153366353 Rr587721 577 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs586635406
MGI SNP Detail
Alliance Variant
Chr3:153366374 Rr587721 598 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs263378775
MGI SNP Detail
Alliance Variant
Chr3:153366420 Rr587721 644 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs224305665
MGI SNP Detail
Alliance Variant
Chr3:153366421 Rr587721 645 bp distal
St6galnac3 Intron
St6galnac3 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 100 of 140

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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory