About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Rr587785
regulatory region 587785
MGI:8049917

<< first < prev1 next > last >>
Showing SNP(s) 1 - 74 of 74

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs585121243
MGI SNP Detail
Alliance Variant		 Chr3:153589937 Msh4 Intron
Rr587785 1985 bp proximal
 SNP A/G G G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579697368
MGI SNP Detail
Alliance Variant		 Chr3:153590071 Msh4 Intron
Rr587785 1851 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs583168627
MGI SNP Detail
Alliance Variant		 Chr3:153590077 Msh4 Intron
Rr587785 1845 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs586330463
MGI SNP Detail
Alliance Variant		 Chr3:153590087 Msh4 Intron
Rr587785 1835 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580518975
MGI SNP Detail
Alliance Variant		 Chr3:153590120 Msh4 Intron
Rr587785 1802 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs583397812
MGI SNP Detail
Alliance Variant		 Chr3:153590141 Msh4 Intron
Rr587785 1781 bp proximal
 SNP A/G G G A A A A A A A A A A A A A A A G A A G A A A G A A A G A A A A A A A A G A A A A A A A A A A A A
rs587308219
MGI SNP Detail
Alliance Variant		 Chr3:153590152 Msh4 Intron
Rr587785 1770 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253411913
MGI SNP Detail
Alliance Variant		 Chr3:153590165 Msh4 Intron
Rr587785 1757 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216552364
MGI SNP Detail
Alliance Variant		 Chr3:153590189 Msh4 Intron
Rr587785 1733 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236765345
MGI SNP Detail
Alliance Variant		 Chr3:153590207 Msh4 Intron
Rr587785 1715 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs261908240
MGI SNP Detail
Alliance Variant		 Chr3:153590221 Msh4 Intron
Rr587785 1701 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs221212857
MGI SNP Detail
Alliance Variant		 Chr3:153590275 Msh4 Intron
Rr587785 1647 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229605320
MGI SNP Detail
Alliance Variant		 Chr3:153590298 Msh4 Intron
Rr587785 1624 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs580903256
MGI SNP Detail
Alliance Variant		 Chr3:153590448 Msh4 Intron
Rr587785 1474 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252959572
MGI SNP Detail
Alliance Variant		 Chr3:153590603 Msh4 Intron
Rr587785 1319 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221914269
MGI SNP Detail
Alliance Variant		 Chr3:153590662 Msh4 Intron
Rr587785 1260 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240035110
MGI SNP Detail
Alliance Variant		 Chr3:153590752 Msh4 Intron
Rr587785 1170 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs237857115
MGI SNP Detail
Alliance Variant		 Chr3:153590775 Msh4 Intron
Rr587785 1147 bp proximal
 SNP C C C
rs223049100
MGI SNP Detail
Alliance Variant		 Chr3:153590804 Msh4 Intron
Rr587785 1118 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242999980
MGI SNP Detail
Alliance Variant		 Chr3:153590849 Msh4 Intron
Rr587785 1073 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs265106082
MGI SNP Detail
Alliance Variant		 Chr3:153590887 Msh4 Intron
Rr587785 1035 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C T C
rs225161726
MGI SNP Detail
Alliance Variant		 Chr3:153590974 Msh4 Intron
Rr587785 948 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs243564510
MGI SNP Detail
Alliance Variant		 Chr3:153590975 Msh4 Intron
Rr587785 947 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261356714
MGI SNP Detail
Alliance Variant		 Chr3:153590982 Msh4 Intron
Rr587785 940 bp proximal
 SNP C/T T T T C C C C C T C C C C C C C C C C C C C C C C C C T C C C T C C C C C C C C C C C C C C C C C C C C C
rs228835057
MGI SNP Detail
Alliance Variant		 Chr3:153590983 Msh4 Intron
Rr587785 939 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258787526
MGI SNP Detail
Alliance Variant		 Chr3:153591077 Msh4 Intron
Rr587785 845 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs30209764
MGI SNP Detail
Alliance Variant		 Chr3:153591265 Msh4 Intron
Rr587785 657 bp proximal
 SNP A/G A G G G G G G G G G G G G G G G
rs583501971
MGI SNP Detail
Alliance Variant		 Chr3:153591293 Msh4 Intron
Rr587785 629 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs239259355
MGI SNP Detail
Alliance Variant		 Chr3:153591294 Msh4 Intron
Rr587785 628 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A
rs30608014
MGI SNP Detail
Alliance Variant		 Chr3:153591340 Msh4 Intron
Rr587785 582 bp proximal
 SNP C/T C C T C C C C C T T C C C C T C
rs30607131
MGI SNP Detail
Alliance Variant		 Chr3:153591390 Msh4 Intron
Rr587785 532 bp proximal
 SNP A/G G G G G G G A G G G G G G G G
rs586644743
MGI SNP Detail
Alliance Variant		 Chr3:153591564 Msh4 Intron
Rr587785 358 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580689330
MGI SNP Detail
Alliance Variant		 Chr3:153591568 Msh4 Intron
Rr587785 354 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48268581
MGI SNP Detail
Alliance Variant		 Chr3:153591597 Msh4 Intron
Rr587785 325 bp proximal
 SNP C/T T C C
rs252938611
MGI SNP Detail
Alliance Variant		 Chr3:153591684 Msh4 Intron
Rr587785 238 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G
rs30607128
MGI SNP Detail
Alliance Variant		 Chr3:153591694 Msh4 Intron
Rr587785 228 bp proximal
 SNP C/T C T C C C T T T C C C C T
rs30607125
MGI SNP Detail
Alliance Variant		 Chr3:153591710 Msh4 Intron
Rr587785 212 bp proximal
 SNP A/C A A A A A A C A A A A A A A A
rs30606282
MGI SNP Detail
Alliance Variant		 Chr3:153591774 Msh4 Intron
Rr587785 148 bp proximal
 SNP C/G C C G C C G C G G C C C C G G
rs584372192
MGI SNP Detail
Alliance Variant		 Chr3:153591821 Msh4 Intron
Rr587785 101 bp proximal
 SNP A/T A T T T T A T T T T T T T T T T A A A T A T A A T T T T T T T T T T T T A A A A
rs387866311
MGI SNP Detail
Alliance Variant		 Chr3:153591826 Msh4 Intron
Rr587785 96 bp proximal
 SNP G/T T T T T G T T T T T T T T T T G G T G T G G T T T T T T T T T T T T G G G G
rs581676905
MGI SNP Detail
Alliance Variant		 Chr3:153591831 Msh4 Intron
Rr587785 91 bp proximal
 SNP C/T C C C C C C C C C C C C C C T T C C T C C C C C C C C C C C C T T
rs584551629
MGI SNP Detail
Alliance Variant		 Chr3:153591837 Msh4 Intron
Rr587785 85 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs579127814
MGI SNP Detail
Alliance Variant		 Chr3:153591841 Msh4 Intron
Rr587785 81 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223384436
MGI SNP Detail
Alliance Variant		 Chr3:153592108 Msh4 Intron
Rr587785 165 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs245785327
MGI SNP Detail
Alliance Variant		 Chr3:153592179 Msh4 Intron
Rr587785 236 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261888471
MGI SNP Detail
Alliance Variant		 Chr3:153592241 Msh4 Intron
Rr587785 298 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219008344
MGI SNP Detail
Alliance Variant		 Chr3:153592369 Msh4 Intron
Rr587785 426 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs237430831
MGI SNP Detail
Alliance Variant		 Chr3:153592440 Msh4 Intron
Rr587785 497 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30606279
MGI SNP Detail
Alliance Variant		 Chr3:153592447 Msh4 Intron
Msh4 Splice-Site
Rr587785 504 bp distal
 SNP C/G G G G G G G C G G G G G G G G
rs228609913
MGI SNP Detail
Alliance Variant		 Chr3:153592539 Msh4 Coding-NonSynonymous
Rr587785 596 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253246636
MGI SNP Detail
Alliance Variant		 Chr3:153592582 Msh4 Coding-Synonymous
Rr587785 639 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265590034
MGI SNP Detail
Alliance Variant		 Chr3:153592735 Msh4 Intron
Rr587785 792 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs231281302
MGI SNP Detail
Alliance Variant		 Chr3:153592739 Msh4 Intron
Rr587785 796 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C
rs255561537
MGI SNP Detail
Alliance Variant		 Chr3:153592759 Msh4 Intron
Rr587785 816 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213201232
MGI SNP Detail
Alliance Variant		 Chr3:153592989 Msh4 Intron
Rr587785 1046 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs223268852
MGI SNP Detail
Alliance Variant		 Chr3:153593004 Msh4 Intron
Rr587785 1061 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs30606276
MGI SNP Detail
Alliance Variant		 Chr3:153593103 Msh4 Intron
Rr587785 1160 bp distal
 SNP C/T C C T C T C T C T C C T T T T C C
rs30605263
MGI SNP Detail
Alliance Variant		 Chr3:153593125 Msh4 Intron
Rr587785 1182 bp distal
 SNP C/T T T C T T T T C C C T T T T C T
rs240511829
MGI SNP Detail
Alliance Variant		 Chr3:153593236 Msh4 Intron
Rr587785 1293 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258348872
MGI SNP Detail
Alliance Variant		 Chr3:153593305 Msh4 Intron
Rr587785 1362 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs215069416
MGI SNP Detail
Alliance Variant		 Chr3:153593336 Msh4 Intron
Rr587785 1393 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236224124
MGI SNP Detail
Alliance Variant		 Chr3:153593432 Msh4 Intron
Rr587785 1489 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs250286266
MGI SNP Detail
Alliance Variant		 Chr3:153593437 Msh4 Intron
Rr587785 1494 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs218092147
MGI SNP Detail
Alliance Variant		 Chr3:153593440 Msh4 Intron
Rr587785 1497 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs237378653
MGI SNP Detail
Alliance Variant		 Chr3:153593480 Msh4 Intron
Rr587785 1537 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255400994
MGI SNP Detail
Alliance Variant		 Chr3:153593522 Msh4 Intron
Rr587785 1579 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30605260
MGI SNP Detail
Alliance Variant		 Chr3:153593557 Msh4 Intron
Rr587785 1614 bp distal
 SNP A/G G G A G G G G G A A G G G G A G
rs249157396
MGI SNP Detail
Alliance Variant		 Chr3:153593619 Msh4 Intron
Rr587785 1676 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263223106
MGI SNP Detail
Alliance Variant		 Chr3:153593658 Msh4 Intron
Rr587785 1715 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs231594939
MGI SNP Detail
Alliance Variant		 Chr3:153593717 Msh4 Intron
Rr587785 1774 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs243649473
MGI SNP Detail
Alliance Variant		 Chr3:153593779 Msh4 Intron
Rr587785 1836 bp distal
Rr587787 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254865318
MGI SNP Detail
Alliance Variant		 Chr3:153593782 Msh4 Intron
Rr587785 1839 bp distal
Rr587787 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs223767791
MGI SNP Detail
Alliance Variant		 Chr3:153593791 Msh4 Intron
Rr587785 1848 bp distal
Rr587787 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs247714661
MGI SNP Detail
Alliance Variant		 Chr3:153593851 Msh4 Intron
Rr587785 1908 bp distal
Rr587787 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
<< first < prev1 next > last >>
Showing SNP(s) 1 - 74 of 74
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory