Mouse SNP Summary
|
Symbol Name ID |
Rr587788
regulatory region 587788 MGI:8049920 |
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SNPs to Text File
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs216089937 MGI SNP Detail Alliance Variant |
Chr3:153599205 | Msh4 Rr587788 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs264984253 MGI SNP Detail Alliance Variant |
Chr3:153599268 | Msh4 Rr587788 |
SNP | C | C | C | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs243644367 MGI SNP Detail Alliance Variant |
Chr3:153599315 | Msh4 Rr587788 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs212671234 MGI SNP Detail Alliance Variant |
Chr3:153599319 | Msh4 Rr587788 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | ||
| rs223178789 MGI SNP Detail Alliance Variant |
Chr3:153599474 | Msh4 Rr587788 |
SNP | T | T | T | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs260651627 MGI SNP Detail Alliance Variant |
Chr3:153599506 | Msh4 Rr587788 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | ||
| rs218042621 MGI SNP Detail Alliance Variant |
Chr3:153599534 | Msh4 Rr587788 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs578551407 MGI SNP Detail Alliance Variant |
Chr3:153599634 | Msh4 Rr587788 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs582632436 MGI SNP Detail Alliance Variant |
Chr3:153599642 | Msh4 Rr587788 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs586201357 MGI SNP Detail Alliance Variant |
Chr3:153599654 | Msh4 Rr587788 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs238691110 MGI SNP Detail Alliance Variant |
Chr3:153599702 | Msh4 Rr587788 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | ||
| rs262816953 MGI SNP Detail Alliance Variant |
Chr3:153599709 | Msh4 Rr587788 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs220203968 MGI SNP Detail Alliance Variant |
Chr3:153599715 | Msh4 Rr587788 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs238739910 MGI SNP Detail Alliance Variant |
Chr3:153599741 | Msh4 Rr587788 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | ||
| rs580414675 MGI SNP Detail Alliance Variant |
Chr3:153599795 | Msh4 Rr587788 |
SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | |||
| rs251333604 MGI SNP Detail Alliance Variant |
Chr3:153600013 | Msh4 Rr587788 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs219040644 MGI SNP Detail Alliance Variant |
Chr3:153600062 | Msh4 Rr587788 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs247511338 MGI SNP Detail Alliance Variant |
Chr3:153600069 | Msh4 Rr587788 |
SNP | C | C | C | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs264481126 MGI SNP Detail Alliance Variant |
Chr3:153600071 | Msh4 Rr587788 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||
| rs46166850 MGI SNP Detail Alliance Variant |
Chr3:153600085 | Msh4 Rr587788 |
SNP | C | C | C | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs246933722 MGI SNP Detail Alliance Variant |
Chr3:153600109 | Msh4 Rr587788 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | ||
| rs265573485 MGI SNP Detail Alliance Variant |
Chr3:153600130 | Msh4 Rr587788 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||
| rs226316857 MGI SNP Detail Alliance Variant |
Chr3:153600132 | Msh4 Rr587788 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | ||
| rs244087874 MGI SNP Detail Alliance Variant |
Chr3:153600142 | Msh4 Rr587788 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | ||
| rs212635366 MGI SNP Detail Alliance Variant |
Chr3:153600170 | Msh4 Rr587788 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | ||
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
| rs228719781 MGI SNP Detail Alliance Variant |
Chr3:153600177 | Msh4 Rr587788 |
SNP | C | C | C | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs259757535 MGI SNP Detail Alliance Variant |
Chr3:153600182 | Msh4 Rr587788 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs247800094 MGI SNP Detail Alliance Variant |
Chr3:153600196 | Msh4 Rr587788 |
SNP | C | C | C | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs240996337 MGI SNP Detail Alliance Variant |
Chr3:153600202 | Msh4 Rr587788 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||
| rs258582929 MGI SNP Detail Alliance Variant |
Chr3:153600275 | Msh4 Rr587788 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs254206307 MGI SNP Detail Alliance Variant |
Chr3:153600330 | Msh4 Rr587788 |
SNP | T | T | T | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs231524682 MGI SNP Detail Alliance Variant |
Chr3:153600456 | Msh4 Rr587788 |
SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | |||
| rs250323640 MGI SNP Detail Alliance Variant |
Chr3:153600469 | Msh4 Rr587788 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs219009911 MGI SNP Detail Alliance Variant |
Chr3:153600489 | Msh4 Rr587788 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | ||
| rs234883243 MGI SNP Detail Alliance Variant |
Chr3:153600542 | Msh4 Rr587788 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | ||
| rs264260198 MGI SNP Detail Alliance Variant |
Chr3:153600549 | Msh4 Rr587788 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs224818024 MGI SNP Detail Alliance Variant |
Chr3:153600555 | Msh4 Rr587788 |
SNP | A/G | G | A | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs582478505 MGI SNP Detail Alliance Variant |
Chr3:153600581 | Msh4 Rr587788 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||
| rs249212307 MGI SNP Detail Alliance Variant |
Chr3:153600588 | Msh4 Rr587788 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | ||
| rs263338791 MGI SNP Detail Alliance Variant |
Chr3:153600599 | Msh4 Rr587788 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs220387034 MGI SNP Detail Alliance Variant |
Chr3:153600659 | Msh4 Rr587788 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||
| rs237822664 MGI SNP Detail Alliance Variant |
Chr3:153600688 | Msh4 Rr587788 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs254901547 MGI SNP Detail Alliance Variant |
Chr3:153600731 | Msh4 Rr587788 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs223268861 MGI SNP Detail Alliance Variant |
Chr3:153600749 | Msh4 Rr587788 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs30603963 MGI SNP Detail Alliance Variant |
Chr3:153600841 | Msh4 Rr587788 |
SNP | A/G | G | A | G | A | G | A | A | G | G | G | A | A | A | G | G | ||||||||||||||||||||||||||||||||||||||||
| rs30603960 MGI SNP Detail Alliance Variant |
Chr3:153600860 | Msh4 Rr587788 |
SNP | C/T | C | C | T | C | C | C | C | C | T | T | T | C | C | C | C | T | C | ||||||||||||||||||||||||||||||||||||||
| rs232042802 MGI SNP Detail Alliance Variant |
Chr3:153600885 | Msh4 Rr587788 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | ||
| rs256876617 MGI SNP Detail Alliance Variant |
Chr3:153600965 | Msh4 Rr587788 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs214343269 MGI SNP Detail Alliance Variant |
Chr3:153601026 | Msh4 Rr587788 |
SNP | A/G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | A | A | A | A | G | A | G | A | A | A | G | G | G | G | G | G | G | G | G | G | A | G | G | A | A | A | A | A | A | A | ||||||||||
| rs586164464 MGI SNP Detail Alliance Variant |
Chr3:153601040 | Msh4 Rr587788 |
SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | |||
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
| rs579891221 MGI SNP Detail Alliance Variant |
Chr3:153601041 | Msh4 Rr587788 |
SNP | A/G | G | G | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | G | G | G | G | G | A | G | A | G | G | G | G | A | A | A | A | A | A | A | A | G | A | A | G | A | A | G | G | G | G | G | |||||||
| rs583551032 MGI SNP Detail Alliance Variant |
Chr3:153601044 | Msh4 Rr587788 |
SNP | A/G | G | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | G | |||||||
| rs231742109 MGI SNP Detail Alliance Variant |
Chr3:153601089 | Msh4 Rr587788 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | ||
| rs30603957 MGI SNP Detail Alliance Variant |
Chr3:153601121 | Msh4 Rr587788 |
SNP | C/T | T | T | C | T | T | T | T | C | C | T | T | T | T | C | T | ||||||||||||||||||||||||||||||||||||||||
| rs211991717 MGI SNP Detail Alliance Variant |
Chr3:153601128 | Msh4 Rr587788 |
SNP | C/T | T | T | T | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C | C | T | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | ||
| rs236471918 MGI SNP Detail Alliance Variant |
Chr3:153601146 | Msh4 Rr587788 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | ||
| rs260987846 MGI SNP Detail Alliance Variant |
Chr3:153601171 | Msh4 Rr587788 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||
| rs226396038 MGI SNP Detail Alliance Variant |
Chr3:153601183 | Msh4 Rr587788 |
SNP | A/G | G | G | G | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A | A | G | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs30603954 MGI SNP Detail Alliance Variant |
Chr3:153601186 | Msh4 Rr587788 |
SNP | A/G | A | G | A | G | A | A | A | G | G | G | A | A | A | A | G | A | |||||||||||||||||||||||||||||||||||||||
| rs251313209 MGI SNP Detail Alliance Variant |
Chr3:153601188 | Msh4 Rr587788 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs220350523 MGI SNP Detail Alliance Variant |
Chr3:153601212 | Msh4 Rr587788 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs237985403 MGI SNP Detail Alliance Variant |
Chr3:153601227 | Msh4 Rr587788 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs254865351 MGI SNP Detail Alliance Variant |
Chr3:153601254 | Msh4 Rr587788 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||
| rs30603131 MGI SNP Detail Alliance Variant |
Chr3:153601289 | Msh4 Rr587788 |
SNP | C/T | C | C | T | C | C | C | C | C | T | T | T | C | C | C | C | T | C | ||||||||||||||||||||||||||||||||||||||
| rs251746858 MGI SNP Detail Alliance Variant |
Chr3:153601346 | Msh4 Rr587788 |
SNP | C/T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | C | T | C | T | C | T | T | C | T | C | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | C | C | C | C | C | T | T | ||
| rs263895270 MGI SNP Detail Alliance Variant |
Chr3:153601347 | Msh4 Rr587788 |
SNP | A/G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | A | G | A | G | A | G | G | A | G | A | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | A | A | G | A | A | G | G | ||
| rs232833320 MGI SNP Detail Alliance Variant |
Chr3:153601348 | Msh4 Rr587788 |
SNP | C/G | G | G | G | G | C | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | C | G | C | G | C | G | G | C | G | C | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | C | C | G | C | C | G | G | ||
| rs251943726 MGI SNP Detail Alliance Variant |
Chr3:153601380 | Msh4 Rr587788 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||
| rs30603128 MGI SNP Detail Alliance Variant |
Chr3:153601404 | Msh4 Rr587788 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | A | ||||||||||||||||||||||||||||||||||||||||||
| rs225739289 MGI SNP Detail Alliance Variant |
Chr3:153601439 | Msh4 Rr587788 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | ||
| rs244296813 MGI SNP Detail Alliance Variant |
Chr3:153601453 | Msh4 Rr587788 |
SNP | A/G | A | A | A | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | G | G | A | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs212048459 MGI SNP Detail Alliance Variant |
Chr3:153601464 | Msh4 Rr587788 |
SNP | A/G | A | A | A | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | G | G | A | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | ||
| rs30603125 MGI SNP Detail Alliance Variant |
Chr3:153601484 | Msh4 Rr587788 |
SNP | C/T | T | C | T | C | T | C | C | C | C | T | T | C | C | C | C | T | C | ||||||||||||||||||||||||||||||||||||||
| rs259131007 MGI SNP Detail Alliance Variant |
Chr3:153601543 | Msh4 Rr587788 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | ||
| rs30602232 MGI SNP Detail Alliance Variant |
Chr3:153601549 | Msh4 Rr587788 |
SNP | C/T | T | C | C | C | T | C | C | C | C | C | C | C | C | C | |||||||||||||||||||||||||||||||||||||||||
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
| rs241348183 MGI SNP Detail Alliance Variant |
Chr3:153601556 | Msh4 Rr587788 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | ||
| rs251272693 MGI SNP Detail Alliance Variant |
Chr3:153601588 | Msh4 Rr587788 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs30602229 MGI SNP Detail Alliance Variant |
Chr3:153601600 | Msh4 Rr587788 |
SNP | C/T | C | T | T | T | C | T | T | T | T | T | T | T | T | T | T | ||||||||||||||||||||||||||||||||||||||||
| rs231744769 MGI SNP Detail Alliance Variant |
Chr3:153601640 | Msh4 Rr587788 |
SNP | A/G | A | A | A | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | G | G | A | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | ||
| rs249232399 MGI SNP Detail Alliance Variant |
Chr3:153601686 | Msh4 Rr587788 |
SNP | A/T | T | T | T | A | A | A | A | A | T | A | A | A | A | A | A | A | A | A | A | T | A | A | T | A | A | A | A | T | A | A | A | T | A | A | A | A | A | A | A | A | T | A | A | A | A | A | A | A | A | A | A | A | A | ||
| rs220583388 MGI SNP Detail Alliance Variant |
Chr3:153601745 | Msh4 Rr587788 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs248597583 MGI SNP Detail Alliance Variant |
Chr3:153601799 | Msh4 Rr587788 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | ||
| rs263941069 MGI SNP Detail Alliance Variant |
Chr3:153601800 | Msh4 Rr587788 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs224738543 MGI SNP Detail Alliance Variant |
Chr3:153601823 | Msh4 Rr587788 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | ||
| rs240349419 MGI SNP Detail Alliance Variant |
Chr3:153601834 | Msh4 Rr587788 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | ||
| rs255247716 MGI SNP Detail Alliance Variant |
Chr3:153601897 | Msh4 Rr587788 |
SNP | A | A | A | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs225390622 MGI SNP Detail Alliance Variant |
Chr3:153601905 | Msh4 Rr587788 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs218173906 MGI SNP Detail Alliance Variant |
Chr3:153601916 | Msh4 Rr587788 |
SNP | T | T | T | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs230562439 MGI SNP Detail Alliance Variant |
Chr3:153601963 | Msh4 Rr587788 |
SNP | C | C | C | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs234973002 MGI SNP Detail Alliance Variant |
Chr3:153601970 | Msh4 Rr587788 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | ||
| rs253791245 MGI SNP Detail Alliance Variant |
Chr3:153601992 | Msh4 Rr587788 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | ||
| rs256802005 MGI SNP Detail Alliance Variant |
Chr3:153602020 | Msh4 Rr587788 |
SNP | T | T | T | |||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs232547359 MGI SNP Detail Alliance Variant |
Chr3:153602040 | Msh4 Rr587788 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | ||
| rs245461066 MGI SNP Detail Alliance Variant |
Chr3:153602042 | Msh4 Rr587788 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs214580810 MGI SNP Detail Alliance Variant |
Chr3:153602090 | Msh4 Rr587788 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | ||
| rs231459656 MGI SNP Detail Alliance Variant |
Chr3:153602096 | Msh4 Rr587788 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | ||
| rs30602226 MGI SNP Detail Alliance Variant |
Chr3:153602100 | Msh4 Rr587788 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | |||||||||||||||||||||||||||||||||||||||||
| rs212381417 MGI SNP Detail Alliance Variant |
Chr3:153602105 | Msh4 Rr587788 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | ||
| rs243536380 MGI SNP Detail Alliance Variant |
Chr3:153602128 | Msh4 Rr587788 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | ||
| rs260482960 MGI SNP Detail Alliance Variant |
Chr3:153602190 | Msh4 Rr587788 |
SNP | G/T | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | T | G | G | T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | T | T | T | G | G |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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